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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4l1mB_

Fold library idPDB HeaderMoleculeTitle
c4l1mB_PDB header: ligaseChain: B: PDB Molecule: e3 ubiquitin-protein ligase herc2;PDBTitle: structure of the first rcc1-like domain of herc2


Added to library: Sat Jul 6 08:46:04 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LQEVIGWGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLA
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Known secondary structure (DSSP)


S


TTTTT

S

TT

SSTTS
TT
SS



TT
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence SRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKAGKHVVHIACGSTY
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Known secondary structure (DSSP) TS


TT

TTS


GGGTTSSSS



GGGTT

TTS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDG
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Known secondary structure (DSSP) TT



GGGTT
SSS



GGGTTS


SS
TTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKL
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Known secondary structure (DSSP) GGGTTSSSSS


GGGTTS
TTTTS


GGGTT
SSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence LEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQ
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Known secondary structure (DSSP)
GGGTTS

SSTTS

TT
S
TT

SS
TT
TTS

SS
 .......
Sequence SFAWSSC
Predicted secondary structure
SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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