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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4h5lE_

Fold library idPDB HeaderMoleculeTitle
c4h5lE_PDB header: viral proteinChain: E: PDB Molecule: nucleoprotein;PDBTitle: crystal structure of toscana virus nucleocapsid protein hexamer


Added to library: Wed Jan 9 17:28:46 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NYRDIALAFLDESADSGTINAWVNEFAYQGFDPKRIVQLVKERGTAKGRDWKKDVKMMIVLNLVRGNKPE
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Known secondary structure (DSSP)
GGGSS


S

S

TT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence AMMKKMSEKGASIVANLISVYQLKEGNPGRDTITLSRVSAAFVPWTVQALRVLSESLPVSGTTMDAIAGV
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Known secondary structure (DSSP) TS
TB
SSS

TT
B
TSTTSSSS
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TYPRAMMHPSFAGIIDLDLPNGAGATIADAHGLFMIEFSKTINPSLRTKQANEVAATFEKPNMAAMSGRF
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Known secondary structure (DSSP)


GGGSSGGGGGG

TT
GGG
GGGSSS
T
SS
 .........220.........230.........240....
Sequence FTREDKKKLLIAVGIIDEDLVLASAVVRSAEKYR
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Known secondary structure (DSSP) S
TTSB
TT

B
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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