Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4fspA_

Fold library idPDB HeaderMoleculeTitle
c4fspA_PDB header: transport proteinChain: A: PDB Molecule: probable porin;PDBTitle: crystal structure of pseudomonas aeruginosa occk11 (opdr)


Added to library: Sat Jul 27 08:39:44 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LYFQGLEEGFLEDSRASLALRNFYMNRDFRKSEEWAQGFLFDYRSGYTEGTLGVGLDLLGKLGVRLDYAR
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP)





S

TTTT






SSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence LDATAKLRLSRSELKVGGLVPKLPTIQPNYGRLFPQVFQGALLTSGELSGLSLNLGRLTEVSSDLALFNR
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TT


BTTB

SSSS




STT


B

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NRRFAGAAQADRFDLAGLDYRIAPDWTGSYHYGELEQVYAQHFLGLKGRIGIAADSLESDLRLALSRDTG
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TT
SSS

S
TTTTT
SSS
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GARGGRIDNRSFSGSLTYRLRNGQAFGLGYQRMSGDHGFPYLEGTDPYLVNFGQYNDFAEAGESSWQLRY
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) T
TT



TTSSSS



BTT
S
SS

SS



STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DCDFAPLGVPGLSLMTRYFSGHGAKPKGADGSREWERDSDLRYVLQGGALKGLGLVWRNATYRSAFSRDI
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)
GGGT
TT



SSS





SSTTTT
SSS

 .........360....
Sequence DENRLYLTYELPLF
Predicted secondary structure

SS confidence













Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D