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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4fsoB_

Fold library idPDB HeaderMoleculeTitle
c4fsoB_PDB header: transport proteinChain: B: PDB Molecule: probable porin;PDBTitle: crystal structure of pseudomonas aeruginosa occk10 (opdn)


Added to library: Sat Jul 27 08:32:16 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DGSARLEARTVYFNRDFKREEAAQGFILDLRSGYTEGALGFGVDTLAMLGQYAKAGVAGKMRFSQTQFRY
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SSS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GAMLPDMPLLKYNDGRLLPTLFHGAQLTSEEIAGLRFSATRLERYTAAQDIRLHDTTGNRFDAYQLDYQV
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BTTB

SSSS




STT

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B



B
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NDGLLLQYAQGGLRNVYRQRYLGAVGKRQVGAGKLSADLRWFDSEDAGAARAGKIDNRALSLLLAYAQGG
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Known secondary structure (DSSP) TTTTSTT
TT
SS


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence HTLSAGWQRMNGASSMPYLDGSNPYLANYLQVNDFANPEERSWQLRYDFDLRSVGVPGLSFMTRYVNGDH
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Known secondary structure (DSSP) SSS




TT


TT

SS



STT
TTTTT
TT
 .........290.........300.........310.........320.........330.........340
Sequence IRLANGDEGKEWERDIELKYIVQSGRFKDLSLRLRNATYRTDFRDVDEVRLIASYNLSLF
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Known secondary structure (DSSP)
TTS


SSTTTT





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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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