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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3jd5e_

Fold library idPDB HeaderMoleculeTitle
c3jd5e_7.00PDB header: ribosomeChain: E: PDB Molecule: 28s ribosomal protein s5, mitochondrial;


Added to library: Sat Jul 16 08:19:49 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SRKWEARAKEDCHLADLASLMDKTYERKLPVSSLTISRFVDNISSREEIDHAEYYLYKFRHSPNCWYLRN
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Known secondary structure (DSSP)
TTT








TT



STT

SSTTSS





T
 .........80.........90.........100.........110.........120.........130.........140
Sequence WTIHTWIRQCLKYGAQDKALYTLVNKVQYGIFPDNYTFNLLMDHFIKKENYKDALSVVFEIMMQEAFEVP
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Known secondary structure (DSSP) TTTTTTTSSSSSSSS




STTT

TTTTTTSS


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence STQLLSLYVLYQCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGLSSQLYGYALLGKVELQQGLRAVYHN
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Known secondary structure (DSSP)


S

TTTTTTTTTTT



SSS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence MPLLWRPGYLDRALQVMEKVASSPEDGKLCREALGVLDRALKALTAPAEQLDVEETEQSKLPRYVERYEA
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Known secondary structure (DSSP) SS

S



TTTTSSS



TTTS
B

SSS
B
SSS







SSS

TTTTTTTS
 .........290.........300.........310.........320.........330.........340....
Sequence LHSKLQALGKVESESLLTLTTQLVKEQLPTCEAEDIATYEQKLQEWHLELVNLIEREKEMREKA
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Known secondary structure (DSSP) TT

S
SS

SSSTTTTSS

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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