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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c3bx2B_

Fold library idPDB HeaderMoleculeTitle
c3bx2B_PDB header: transcription, rna binding protein/rnaChain: B: PDB Molecule: protein puf4;PDBTitle: puf4 rna binding domain bound to ho endonuclease rna 3' utr2 recognition sequence


Added to library: Wed Jan 9 21:39:14 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQRIV
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Known secondary structure (DSSP)

SSS
SSGGGTSSTTGGGTSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPEN
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Known secondary structure (DSSP) GGGTSTT

SGGGTSTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAE
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Known secondary structure (DSSP) TTSTTS
TTTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVL
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Known secondary structure (DSSP) T

SGGGTSTTTSSTT
 .........290.........300.........310.........320...
Sequence QTALDISHKQNDYLYKRLSEIVAPLLVGPIRNTPHGKRIIGML
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Known secondary structure (DSSP)


SGGGGSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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