Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionO01498
DateFri May 3 21:45:00 BST 2013
Unique Job ID461520a87ceaff19

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:63.774 Y:45.355 Z:52.534
Model (left) based on template c1dvpA_
Top template information
PDB header:transferase
Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine
PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction
Confidence and coverage
Confidence:100.0% Coverage: 45%
205 residues ( 45% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
307 residues ( 67%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MKKQKSFPMSAYEDLLGKITAPTITVENWEGILAFCDMINNDFEGSKTGIKSLRKRLNNR
Secondary structure 
SS confidence 
Disorder  ?????????
?
???
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  DPHVVLLAISVLDSCWANCEERFRKEVSSAQFINELKALCTSSQRQVAEKMRLTVQKWVD
Secondary structure 
SS confidence 
Disorder 
???
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  TECKTEQSLSLIVTLHKNLVADGYSFVVDDPKSKTKAIDAKFANDPNYVGSAQEEEAIAK
Secondary structure 
SS confidence 
Disorder 
??????
?
?
?
?????????????????????????
????
?
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  AIAASLADAEKQEKAKKSTSTMYPSAKASSPAVQTNSNIPEKNVRALYDFEAAESNELSF
Secondary structure 
SS confidence 
Disorder 
?
????????????????????????????
?
?
?????????
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  VAGDIITITDESNPHWWTGRIGTQQGLFPSSFVTNQLDDLKSKETDSSQKAPEVVASINE
Secondary structure 
SS confidence 
Disorder 
????????????????????????
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  AILVRCLQVLHECDPTGERQDPEDLAQLEAASYAQGNLIDAHLASIDRQSNSLAQIDVAI
Secondary structure 
SS confidence 
Disorder  ???
?
????????????????
??
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  RDVLALYDDAIQKGGFQHQSQGMYQQPMQQYNYQQPPNRAYYPPTGPVQQQQPQQYPPQH
Secondary structure 
SS confidence 
Disorder 
?????????????????????????????????????????????????
Disorder confidence 
 
   .........430.........440.........450.......
Sequence  YPAPGAQPQYACPPNSVPQPQQQQQQWPAPSSQPQQY
Secondary structure 
SS confidence 
Disorder  ?????????????????????????????????????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered ( 50%)
Alpha helix ( 46%)
Beta strand ( 4%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1dvp chain A

3D model

Region: 7 - 224
Aligned: 205
Modelled: 208
Confidence: 100.0%
Identity: 18%
PDB header:transferase
Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine
PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction

Phyre2

PDB 1x5b chain A

3D model

Region: 7 - 159
Aligned: 152
Modelled: 153
Confidence: 100.0%
Identity: 29%
PDB header:protein binding
Chain: A: PDB Molecule:signal transducing adaptor molecule 2;
PDBTitle: the solution structure of the vhs domain of human signal2 transducing adaptor molecule 2

Phyre2

PDB 3zyq chain A

3D model

Region: 11 - 162
Aligned: 151
Modelled: 152
Confidence: 100.0%
Identity: 26%
PDB header:signaling
Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine kinase
PDBTitle: crystal structure of the tandem vhs and fyve domains of hepatocyte2 growth factor-regulated tyrosine kinase substrate (hgs-hrs) at 1.483 a resolution

Phyre2

PDB 1dvp chain A domain 1

3D model

Region: 7 - 151
Aligned: 144
Modelled: 145
Confidence: 100.0%
Identity: 24%
Fold: alpha-alpha superhelix
Superfamily: ENTH/VHS domain
Family: VHS domain

Phyre2

PDB 1juq chain A

3D model

Region: 10 - 156
Aligned: 143
Modelled: 147
Confidence: 100.0%
Identity: 27%
Fold: alpha-alpha superhelix
Superfamily: ENTH/VHS domain
Family: VHS domain

Phyre2

PDB 1ujk chain A

3D model

Region: 7 - 144
Aligned: 134
Modelled: 138
Confidence: 100.0%
Identity: 24%
Fold: alpha-alpha superhelix
Superfamily: ENTH/VHS domain
Family: VHS domain

Phyre2

PDB 1elk chain A

3D model

Region: 10 - 147
Aligned: 137
Modelled: 138
Confidence: 100.0%
Identity: 29%
Fold: alpha-alpha superhelix
Superfamily: ENTH/VHS domain
Family: VHS domain

Phyre2

PDB 1mhq chain A

3D model

Region: 11 - 150
Aligned: 136
Modelled: 140
Confidence: 100.0%
Identity: 24%
Fold: alpha-alpha superhelix
Superfamily: ENTH/VHS domain
Family: VHS domain

Phyre2

PDB 3rru chain A

3D model

Region: 8 - 142
Aligned: 134
Modelled: 135
Confidence: 100.0%
Identity: 23%
PDB header:signaling protein
Chain: A: PDB Molecule:tom1l1 protein;
PDBTitle: x-ray crystal structure of the vhs domain of human tom1-like protein,2 northeast structural genomics consortium target hr3050e

Phyre2

PDB 2dcp chain A

3D model

Region: 10 - 116
Aligned: 104
Modelled: 107
Confidence: 99.5%
Identity: 17%
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein (rafl09-17-b18);
PDBTitle: fully automated nmr structure determination of the enth-vhs2 domain at3g16270 from arabidopsis thaliana

Phyre2

PDB 1mv3 chain A

3D model

Region: 185 - 277
Aligned: 93
Modelled: 93
Confidence: 99.1%
Identity: 18%
PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:myc box dependent interacting protein 1;
PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc

Phyre2

PDB 1hf8 chain A domain 2

3D model

Region: 9 - 90
Aligned: 82
Modelled: 82
Confidence: 99.0%
Identity: 20%
Fold: alpha-alpha superhelix
Superfamily: ENTH/VHS domain
Family: Phosphoinositide-binding clathrin adaptor, N-terminal domain

Phyre2

PDB 1inz chain A

3D model

Region: 2 - 116
Aligned: 114
Modelled: 114
Confidence: 99.0%
Identity: 16%
Fold: alpha-alpha superhelix
Superfamily: ENTH/VHS domain
Family: ENTH domain

Phyre2

PDB 1hx8 chain A domain 2

3D model

Region: 12 - 90
Aligned: 79
Modelled: 79
Confidence: 98.9%
Identity: 16%
Fold: alpha-alpha superhelix
Superfamily: ENTH/VHS domain
Family: Phosphoinositide-binding clathrin adaptor, N-terminal domain

Phyre2

PDB 1gri chain A

3D model

Region: 201 - 279
Aligned: 79
Modelled: 79
Confidence: 98.8%
Identity: 32%
PDB header:signal transduction adaptor
Chain: A: PDB Molecule:growth factor bound protein 2;
PDBTitle: grb2

Phyre2

PDB 2dx1 chain A

3D model

Region: 217 - 281
Aligned: 65
Modelled: 65
Confidence: 98.7%
Identity: 35%
PDB header:signaling protein
Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 4;
PDBTitle: crystal structure of rhogef protein asef

Phyre2

PDB 3jv3 chain A

3D model

Region: 220 - 282
Aligned: 63
Modelled: 63
Confidence: 98.7%
Identity: 37%
PDB header:protein binding
Chain: A: PDB Molecule:intersectin-1;
PDBTitle: structure of sh3e-dh unit of murine intersectin-1l

Phyre2

PDB 1ng2 chain A domain 2

3D model

Region: 208 - 279
Aligned: 72
Modelled: 72
Confidence: 98.7%
Identity: 21%
Fold: SH3-like barrel
Superfamily: SH3-domain
Family: SH3-domain

Phyre2

PDB 3nmz chain D

3D model

Region: 201 - 278
Aligned: 78
Modelled: 78
Confidence: 98.6%
Identity: 29%
PDB header:cell adhesion/cell cycle
Chain: D: PDB Molecule:rho guanine nucleotide exchange factor 4;
PDBTitle: crytal structure of apc complexed with asef

Phyre2

PDB 2eyy chain A

3D model

Region: 192 - 285
Aligned: 94
Modelled: 94
Confidence: 98.6%
Identity: 22%
PDB header:signaling protein
Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog
PDBTitle: ct10-regulated kinase isoform i

Phyre2

PDB 2yun chain A

3D model

Region: 217 - 291
Aligned: 75
Modelled: 75
Confidence: 98.6%
Identity: 28%
PDB header:protein transport
Chain: A: PDB Molecule:nostrin;
PDBTitle: solution structure of the sh3 domain of human nostrin

Phyre2

PDB 2dvj chain A

3D model

Region: 192 - 313
Aligned: 122
Modelled: 122
Confidence: 98.3%
Identity: 18%
PDB header:signaling protein
Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog,
PDBTitle: phosphorylated crk-ii

Phyre2
1
c1dvpA_
2
c1x5bA_
3
c3zyqA_
4
d1dvpa1
5
d1juqa_
6
d1ujka_
7
d1elka_
8
d1mhqa_
9
c3rruA_
10
c2dcpA_
11
c1mv3A_
12
d1hf8a2
13
d1inza_
14
d1hx8a2
15
c1griA_
16
c2dx1A_
17
c3jv3A_
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d1ng2a2
19
c3nmzD_
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c2eyyA_
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c2yunA_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1dvpA_
100.0 18 PDB header:transferase
Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine
PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction
2c1x5bA_
100.0 29 PDB header:protein binding
Chain: A: PDB Molecule:signal transducing adaptor molecule 2;
PDBTitle: the solution structure of the vhs domain of human signal2 transducing adaptor molecule 2
3c3zyqA_
100.0 26 PDB header:signaling
Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine kinase
PDBTitle: crystal structure of the tandem vhs and fyve domains of hepatocyte2 growth factor-regulated tyrosine kinase substrate (hgs-hrs) at 1.483 a resolution
4d1dvpa1
100.0 24 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:VHS domain
5d1juqa_
100.0 27 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:VHS domain
6d1ujka_
100.0 24 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:VHS domain
7d1elka_
100.0 29 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:VHS domain
8d1mhqa_
100.0 24 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:VHS domain
9c3rruA_
100.0 23 PDB header:signaling protein
Chain: A: PDB Molecule:tom1l1 protein;
PDBTitle: x-ray crystal structure of the vhs domain of human tom1-like protein,2 northeast structural genomics consortium target hr3050e
10c2dcpA_
99.5 17 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein (rafl09-17-b18);
PDBTitle: fully automated nmr structure determination of the enth-vhs2 domain at3g16270 from arabidopsis thaliana
11c1mv3A_
99.1 18 PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:myc box dependent interacting protein 1;
PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc
12d1hf8a2
99.0 20 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:Phosphoinositide-binding clathrin adaptor, N-terminal domain
13d1inza_
99.0 16 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:ENTH domain
14d1hx8a2
98.9 16 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:Phosphoinositide-binding clathrin adaptor, N-terminal domain
15c1griA_
98.8 32 PDB header:signal transduction adaptor
Chain: A: PDB Molecule:growth factor bound protein 2;
PDBTitle: grb2
16c2dx1A_
98.7 35 PDB header:signaling protein
Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 4;
PDBTitle: crystal structure of rhogef protein asef
17c3jv3A_
98.7 37 PDB header:protein binding
Chain: A: PDB Molecule:intersectin-1;
PDBTitle: structure of sh3e-dh unit of murine intersectin-1l
18d1ng2a2
98.7 21 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
19c3nmzD_
98.6 29 PDB header:cell adhesion/cell cycle
Chain: D: PDB Molecule:rho guanine nucleotide exchange factor 4;
PDBTitle: crytal structure of apc complexed with asef
20c2eyyA_
98.6 22 PDB header:signaling protein
Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog
PDBTitle: ct10-regulated kinase isoform i
21c2l3sA_
not modelled 98.6 15 PDB header:structural protein
Chain: A: PDB Molecule:autoinhibited crk protein;
PDBTitle: structure of the autoinhibited crk
22c2yunA_
98.6 28 PDB header:protein transport
Chain: A: PDB Molecule:nostrin;
PDBTitle: solution structure of the sh3 domain of human nostrin
23d1udla_
not modelled 98.6 28 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
24c2nwmA_
not modelled 98.6 31 PDB header:cell adhesion
Chain: A: PDB Molecule:vinexin;
PDBTitle: solution structure of the first sh3 domain of human vinexin2 and its interaction with the peptides from vinculin
25c2eyzA_
not modelled 98.6 13 PDB header:signaling protein
Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog
PDBTitle: ct10-regulated kinase isoform ii
26c1wi7A_
not modelled 98.6 24 PDB header:protein binding
Chain: A: PDB Molecule:sh3-domain kinase binding protein 1;
PDBTitle: solution structure of the sh3 domain of sh3-domain kinase2 binding protein 1
27c1ng2A_
not modelled 98.6 20 PDB header:oxidoreductase activator
Chain: A: PDB Molecule:neutrophil cytosolic factor 1;
PDBTitle: structure of autoinhibited p47phox
28c2l0aA_
not modelled 98.6 51 PDB header:signaling protein
Chain: A: PDB Molecule:signal transducing adapter molecule 1;
PDBTitle: solution nmr structure of signal transducing adapter molecule 1 stam-12 from homo sapiens, northeast structural genomics consortium target3 hr4479e
29c3zymA_
not modelled 98.5 20 PDB header:endocytosis
Chain: A: PDB Molecule:phosphatidylinositol-binding clathrin assembly protein,
PDBTitle: structure of calm (picalm) in complex with vamp8
30c1x2qA_
not modelled 98.5 40 PDB header:signaling protein
Chain: A: PDB Molecule:signal transducing adapter molecule 2;
PDBTitle: solution structure of the sh3 domain of the signal2 transducing adaptor molecule 2
31c2o2oA_
not modelled 98.5 22 PDB header:protein binding
Chain: A: PDB Molecule:sh3-domain kinase-binding protein 1;
PDBTitle: solution structure of domain b from human cin85 protein
32c2ed0A_
not modelled 98.5 26 PDB header:signaling protein
Chain: A: PDB Molecule:abl interactor 2;
PDBTitle: solution structure of the sh3 domain of abl interactor 22 (abelson interactor 2)
33c2cubA_
not modelled 98.5 23 PDB header:signaling protein
Chain: A: PDB Molecule:cytoplasmic protein nck1;
PDBTitle: solution structure of the sh3 domain of the human2 cytoplasmic protein nck1
34c2yuoA_
not modelled 98.5 32 PDB header:signaling protein
Chain: A: PDB Molecule:run and tbc1 domain containing 3;
PDBTitle: solution structure of the sh3 domain of mouse run and tbc12 domain containing 3
35c2jxbA_
not modelled 98.5 18 PDB header:signaling protein complex
Chain: A: PDB Molecule:t-cell surface glycoprotein cd3 epsilon chain,
PDBTitle: structure of cd3epsilon-nck2 first sh3 domain complex
36c2dbmA_
not modelled 98.5 34 PDB header:transferase, signaling protein
Chain: A: PDB Molecule:sh3-containing grb2-like protein 2;
PDBTitle: solution structures of the sh3 domain of human sh3-2 containing grb2-like protein 2
37c1z9qA_
not modelled 98.5 32 PDB header:oxidoreductase activator
Chain: A: PDB Molecule:neutrophil cytosol factor 4;
PDBTitle: solution structure of sh3 domain of p40phox
38c2dl3A_
not modelled 98.5 25 PDB header:cell adhesion, signaling protein
Chain: A: PDB Molecule:sorbin and sh3 domain-containing protein 1;
PDBTitle: solution structure of the first sh3 domain of human sorbin2 and sh3 domain-containing protein 1
39c2ysqA_
not modelled 98.5 36 PDB header:signaling protein
Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 9;
PDBTitle: solution structure of the sh3 domain from rho guanine2 nucleotide exchange factor 9
40c2ed1A_
not modelled 98.5 37 PDB header:signaling protein
Chain: A: PDB Molecule:130 kda phosphatidylinositol 4,5-biphosphate-
PDBTitle: solution structure of the sh3 domain of 130 kda2 phosphatidylinositol 4,5-biphosphate-dependent arf1 gtpase-3 activating protein
41d1k4us_
not modelled 98.5 32 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
42c2ebpA_
not modelled 98.5 25 PDB header:cell adhesion
Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1;
PDBTitle: solution structure of the sh3 domain from human sam and sh32 domain containing protein 1
43c2lqnA_
not modelled 98.5 16 PDB header:signaling protein
Chain: A: PDB Molecule:crk-like protein;
PDBTitle: solution structure of crkl
44c2oi3A_
not modelled 98.5 25 PDB header:transferase
Chain: A: PDB Molecule:tyrosine-protein kinase hck;
PDBTitle: nmr structure analysis of the hematopoetic cell kinase sh32 domain complexed with an artificial high affinity ligand3 (pd1)
45d1uj0a_
not modelled 98.5 54 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
46c2djqA_
not modelled 98.5 24 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:sh3 domain containing ring finger 2;
PDBTitle: the solution structure of the first sh3 domain of mouse sh32 domain containing ring finger 2
47c1x43A_
not modelled 98.5 28 PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:sh3 domain grb2-like protein b1;
PDBTitle: solution structure of the sh3 domain of endophilin b12 (sh3g1b1)
48c2xmfA_
not modelled 98.5 44 PDB header:motor protein
Chain: A: PDB Molecule:myosin 1e sh3;
PDBTitle: myosin 1e sh3
49d1ov3a2
not modelled 98.5 21 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
50c4igzA_
not modelled 98.5 33 PDB header:protein binding
Chain: A: PDB Molecule:sorbin and sh3 domain-containing protein 2;
PDBTitle: crystal structure of the sh3 domain of human sorbin and sh3 domain-2 containing protein 2
51c2dilA_
not modelled 98.5 29 PDB header:cell adhesion
Chain: A: PDB Molecule:proline-serine-threonine phosphatase-interacting
PDBTitle: solution structure of the sh3 domain of the human proline-2 serine-threonine phosphatase-interacting protein 1
52c2rqrA_
not modelled 98.5 21 PDB header:protein binding
Chain: A: PDB Molecule:engulfment and cell motility protein 1, linker, dedicator
PDBTitle: the solution structure of human dock2 sh3 domain - elmo1 peptide2 chimera complex
53c2dlpA_
not modelled 98.4 29 PDB header:structural protein
Chain: A: PDB Molecule:kiaa1783 protein;
PDBTitle: solution structure of the sh3 domain of human kiaa17832 protein
54c2dl4A_
not modelled 98.4 35 PDB header:signaling protein
Chain: A: PDB Molecule:protein stac;
PDBTitle: solution structure of the first sh3 domain of stac protein
55c2dmoA_
not modelled 98.4 23 PDB header:signaling protein
Chain: A: PDB Molecule:neutrophil cytosol factor 2;
PDBTitle: refined solution structure of the 1st sh3 domain from human2 neutrophil cytosol factor 2 (ncf-2)
56c1w70A_
not modelled 98.4 36 PDB header:sh3 domain
Chain: A: PDB Molecule:neutrophil cytosol factor 4;
PDBTitle: sh3 domain of p40phox complexed with c-terminal polyproline2 region of p47phox
57d2hspa_
not modelled 98.4 31 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
58d1gria2
not modelled 98.4 40 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
59c2bzxA_
not modelled 98.4 24 PDB header:sh3 domain
Chain: A: PDB Molecule:crk-like protein;
PDBTitle: atomic model of crkl-sh3c monomer
60c2kymA_
not modelled 98.4 21 PDB header:signaling protein
Chain: A: PDB Molecule:bud emergence protein 1;
PDBTitle: solution structure of the bem1p sh3-ci domain from l.elongisporus in2 complex with ste20p peptide
61d1ujya_
not modelled 98.4 30 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
62c2pqhA_
not modelled 98.4 27 PDB header:structural protein
Chain: A: PDB Molecule:spectrin alpha chain, brain;
PDBTitle: structure of sh3 chimera with a type ii ligand linked to the chain c-2 terminal
63d1uhfa_
not modelled 98.4 32 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
64c2yt6A_
not modelled 98.4 25 PDB header:cell cycle
Chain: A: PDB Molecule:adult male urinary bladder cdna, riken full-
PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
65c2dnuA_
not modelled 98.4 18 PDB header:structural genomics, structural protein
Chain: A: PDB Molecule:sh3 multiple domains 1;
PDBTitle: solution structure of rsgi ruh-061, a sh3 domain from human
66c2csqA_
not modelled 98.4 22 PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:rim binding protein 2;
PDBTitle: solution structure of the second sh3 domain of human rim-2 binding protein 2
67c2eyxA_
not modelled 98.4 18 PDB header:signaling protein
Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog
PDBTitle: c-terminal sh3 domain of ct10-regulated kinase
68c2dbkA_
not modelled 98.4 22 PDB header:signaling protein
Chain: A: PDB Molecule:crk-like protein;
PDBTitle: solution structures of the sh3 domain of human crk-like2 protein
69d1sema_
not modelled 98.4 42 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
70c2ekhA_
not modelled 98.4 19 PDB header:signaling protein
Chain: A: PDB Molecule:sh3 and px domain-containing protein 2a;
PDBTitle: solution structures of the sh3 domain of human kiaa0418
71c1x69A_
not modelled 98.4 33 PDB header:signaling protein
Chain: A: PDB Molecule:cortactin isoform a;
PDBTitle: solution structures of the sh3 domain of human src2 substrate cortactin
72c2drmB_
not modelled 98.4 33 PDB header:contractile protein
Chain: B: PDB Molecule:acanthamoeba myosin ib;
PDBTitle: acanthamoeba myosin i sh3 domain bound to acan125
73c2df6A_
not modelled 98.4 36 PDB header:signaling protein
Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 7;
PDBTitle: crystal structure of the sh3 domain of betapix in complex2 with a high affinity peptide from pak2
74c1x2pA_
not modelled 98.4 24 PDB header:transferase
Chain: A: PDB Molecule:protein arginine n-methyltransferase 2;
PDBTitle: solution structure of the sh3 domain of the protein2 arginine n-methyltransferase 2
75c2d1xD_
not modelled 98.4 37 PDB header:cell invasion
Chain: D: PDB Molecule:cortactin isoform a;
PDBTitle: the crystal structure of the cortactin-sh3 domain and amap1-2 peptide complex
76c2eqiA_
not modelled 98.4 34 PDB header:immune system, hydrolase
Chain: A: PDB Molecule:phospholipase c, gamma 2;
PDBTitle: solution structure of the sh3 domain from phospholipase c,2 gamma 2
77c2bz8B_
not modelled 98.4 32 PDB header:sh3 domain
Chain: B: PDB Molecule:sh3-domain kinase binding protein 1;
PDBTitle: n-terminal sh3 domain of cin85 bound to cbl-b peptide
78c2dl8A_
not modelled 98.4 25 PDB header:signaling protein
Chain: A: PDB Molecule:slit-robo rho gtpase-activating protein 2;
PDBTitle: solution structure of the sh3 domain of human slit-robo rho2 gtpase-activating protein 2
79d1szaa_
not modelled 98.4 14 Fold:alpha-alpha superhelix
Superfamily:ENTH/VHS domain
Family:RPR domain (SMART 00582 )
80c2egaA_
not modelled 98.4 20 PDB header:signaling protein
Chain: A: PDB Molecule:sh3 and px domain-containing protein 2a;
PDBTitle: solution structure of the first sh3 domain from human2 kiaa0418 protein
81c2yupA_
not modelled 98.4 29 PDB header:cell adhesion
Chain: A: PDB Molecule:vinexin;
PDBTitle: solution structure of the second sh3 domain of human vinexin
82c4glmD_
not modelled 98.4 39 PDB header:signaling protein
Chain: D: PDB Molecule:dynamin-binding protein;
PDBTitle: crystal structure of the sh3 domain of dnmbp protein [homo sapiens]
83c1wyxA_
not modelled 98.4 31 PDB header:cell adhesion
Chain: A: PDB Molecule:crk-associated substrate;
PDBTitle: the crystal structure of the p130cas sh3 domain at 1.1 a2 resolution
84d1oeba_
not modelled 98.4 47 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
85c2e5kA_
not modelled 98.4 19 PDB header:protein binding
Chain: A: PDB Molecule:suppressor of t-cell receptor signaling 1;
PDBTitle: solution structure of sh3 domain in suppressor of t-cell2 receptor signaling 1
86d1wiea_
not modelled 98.4 21 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
87d1gcqa_
not modelled 98.4 45 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
88d1utia_
not modelled 98.4 48 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
89c1zx6A_
not modelled 98.4 28 PDB header:protein binding
Chain: A: PDB Molecule:ypr154wp;
PDBTitle: high-resolution crystal structure of yeast pin3 sh3 domain
90d1ue9a_
not modelled 98.3 26 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
91d1awja_
not modelled 98.3 25 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
92c2eywA_
not modelled 98.3 26 PDB header:signaling protein
Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog
PDBTitle: n-terminal sh3 domain of ct10-regulated kinase
93c2epdA_
not modelled 98.3 24 PDB header:protein binding
Chain: A: PDB Molecule:rho gtpase-activating protein 4;
PDBTitle: solution structure of sh3 domain in rho-gtpase-activating2 protein 4
94c2dvjA_
98.3 18 PDB header:signaling protein
Chain: A: PDB Molecule:v-crk sarcoma virus ct10 oncogene homolog,
PDBTitle: phosphorylated crk-ii
95d1gbra_
not modelled 98.3 22 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
96c1zlmA_
not modelled 98.3 46 PDB header:signaling protein
Chain: A: PDB Molecule:osteoclast stimulating factor 1;
PDBTitle: crystal structure of the sh3 domain of human osteoclast2 stimulating factor
97c2krnA_
not modelled 98.3 32 PDB header:signaling protein
Chain: A: PDB Molecule:cd2-associated protein;
PDBTitle: high resolution structure of the second sh3 domain of cd2ap
98d1j3ta_
not modelled 98.3 27 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
99d1uuea_
not modelled 98.3 31 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
100c2ke9A_
not modelled 98.3 37 PDB header:protein binding
Chain: A: PDB Molecule:caskin-2;
PDBTitle: nmr solution structure of the caskin sh3 domain
101d1ng2a1
not modelled 98.3 25 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
102d1ov3a1
not modelled 98.3 24 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
103c1negA_
not modelled 98.3 27 PDB header:structural protein
Chain: A: PDB Molecule:spectrin alpha chain, brain;
PDBTitle: crystal structure analysis of n-and c-terminal labeled sh3-2 domain of alpha-chicken spectrin
104d1nega_
not modelled 98.3 27 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
105c3qwyA_
not modelled 98.3 27 PDB header:signaling protein
Chain: A: PDB Molecule:cell death abnormality protein 2;
PDBTitle: ced-2
106c3qwxX_
not modelled 98.3 26 PDB header:signaling protein
Chain: X: PDB Molecule:cell death abnormality protein 2;
PDBTitle: ced-2 1-174
107c2fpeB_
not modelled 98.3 19 PDB header:signaling protein
Chain: B: PDB Molecule:c-jun-amino-terminal kinase interacting protein
PDBTitle: conserved dimerization of the ib1 src-homology 3 domain
108c2d8jA_
not modelled 98.3 35 PDB header:transferase
Chain: A: PDB Molecule:fyn-related kinase;
PDBTitle: solution structure of the sh3 domain of fyn-related kinase
109d1phta_
not modelled 98.3 27 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
110c2cudA_
not modelled 98.3 12 PDB header:signaling protein
Chain: A: PDB Molecule:src-like-adapter;
PDBTitle: solution structure of the sh3 domain of the human src-like2 adopter protein (slap)
111c2rqvA_
not modelled 98.3 25 PDB header:signaling protein
Chain: A: PDB Molecule:bud emergence protein 1;
PDBTitle: solution structure of sh3ci domain of bem1p
112d1pwta_
not modelled 98.3 29 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
113c2ct3A_
not modelled 98.3 20 PDB header:signaling protein
Chain: A: PDB Molecule:vinexin;
PDBTitle: solution structure of the sh3 domain of the vinexin protein
114d1u06a1
not modelled 98.3 32 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
115c2d8hA_
not modelled 98.3 29 PDB header:unknown function
Chain: A: PDB Molecule:sh3yl1 protein;
PDBTitle: solution structure of the sh3 domain of hypothetical2 protein sh3yl1
116d1uffa_
not modelled 98.3 26 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
117c2lx7A_
not modelled 98.3 31 PDB header:protein binding
Chain: A: PDB Molecule:growth arrest-specific protein 7;
PDBTitle: solution nmr structure of sh3 domain of growth arrest-specific protein2 7 (gas7) (fragment 1-60) from homo sapiens, northeast structural3 genomics consortium (nesg) target hr8574a
118d1awwa_
not modelled 98.3 38 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
119d1ugva_
not modelled 98.3 29 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
120d1ycsb2
not modelled 98.3 25 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain

Binding site prediction 

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