Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ9JJP2
DateWed Jul 10 14:03:07 BST 2013
Unique Job IDed9ca3bbbc4877c6
SequenceMAQTSSSSSS ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:45.927 Y:50.316 Z:58.748
Model (left) based on template c3q06B_
Top template information
PDB header:cell cycle/dna
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity
Confidence and coverage
Confidence:100.0% Coverage: 36%
229 residues ( 36% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
435 residues ( 69%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 52% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MAQTSSSSSSTFEHLWSSLEPDSTYFDLPQPSQGTSEASGSEESNMDVFHLQGMAQFNLL
Secondary structure 
SS confidence 
Disorder  ????????
???????????????????????????
??
???????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  SSAMDQMGSRAAPASPYTPEHAASAPTHSPYAQPSSTFDTMSPAPVIPSNTDYPGPHHFE
Secondary structure 
SS confidence 
Disorder  ?
???????????????????????????????????????????????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  VTFQQSSTAKSATWTYSPLLKKLYCQIAKTCPIQIKVSTPPPPGTAIRAMPVYKKAEHVT
Secondary structure 
SS confidence 
Disorder 
????????
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  DIVKRCPNHELGRDFNEGQSAPASHLIRVEGNNLAQYVDDPVTGRQSVVVPYEPPQVGTE
Secondary structure 
SS confidence 
Disorder 
??????????
??
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  FTTILYNFMCNSSCVGGMNRRPILVIITLETRDGQVLGRRSFEGRICACPGRDRKADEDH
Secondary structure 
SS confidence 
Disorder 
?????
???
?
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  YREQQALNESTTKNGAASKRAFKQSPPAIPALGTNVKKRRHGDEDMFYMHVRGRENFEIL
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  MKVKESLELMELVPQPLVDSYRQQQQQQLLQRPSHLQPPSYGPVLSPMNKVHGGVNKLPS
Secondary structure 
SS confidence 
Disorder 
?????
?????????????????????????????????????
Disorder confidence 
 
   .........430.........440.........450.........460.........470.........480
Sequence  VNQLVGQPPPHSSAAGPNLGPMGSGMLNSHGHSMPANGEMNGGHSSQTMVSGSHCTPPPP
Secondary structure 
SS confidence 
Disorder 
??
?????????????????????????
?????????????????????????
Disorder confidence 
 
   .........490.........500.........510.........520.........530.........540
Sequence  YHADPSLVSFLTGLGCPNCIECFTSQGLQSIYHLQNLTIEDLGALKVPDQYRMTIWRGLQ
Secondary structure 
SS confidence 
Disorder  ????
????????
Disorder confidence 
 
   .........550.........560.........570.........580.........590.........600
Sequence  DLKQSHDCGQQLLRSSSNAATISIGGSGELQRQRVMEAVHFRVRHTITIPNRGGAGAVTG
Secondary structure 
SS confidence 
Disorder 
????????
?????????
????????????
?
?????
Disorder confidence 
 
   .........610.........620.........630.
Sequence  PDEWADFGFDLPDCKSRKQPIKEEFTETESH
Secondary structure 
SS confidence 
Disorder  ?
???????????????????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered ( 52%)
Alpha helix ( 25%)
Beta strand ( 17%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3q06 chain B

3D model

Region: 106 - 371
Aligned: 229
Modelled: 231
Confidence: 100.0%
Identity: 55%
PDB header:cell cycle/dna
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity

Phyre2

PDB 2rmn chain A

3D model

Region: 94 - 326
Aligned: 233
Modelled: 233
Confidence: 100.0%
Identity: 77%
PDB header:cell cycle, antitumor protein
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: the solution structure of the p63 dna-binding domain

Phyre2

PDB 2j1x chain A

3D model

Region: 106 - 302
Aligned: 195
Modelled: 197
Confidence: 100.0%
Identity: 59%
PDB header:nuclear protein
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: human p53 core domain mutant m133l-v203a-y220c-n239y-n268d

Phyre2

PDB 2xip chain A

3D model

Region: 104 - 307
Aligned: 201
Modelled: 204
Confidence: 100.0%
Identity: 96%
PDB header:cell cycle
Chain: A: PDB Molecule:tumour protein p73;
PDBTitle: crystal structure of the dna binding domain of human tp732 refined at 1.8 a resolution

Phyre2

PDB 2ac0 chain A domain 1

3D model

Region: 106 - 301
Aligned: 194
Modelled: 196
Confidence: 100.0%
Identity: 59%
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: p53-like transcription factors
Family: p53 DNA-binding domain-like

Phyre2

PDB 1hu8 chain A

3D model

Region: 112 - 299
Aligned: 186
Modelled: 188
Confidence: 100.0%
Identity: 60%
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: p53-like transcription factors
Family: p53 DNA-binding domain-like

Phyre2

PDB 1rg6 chain A

3D model

Region: 482 - 548
Aligned: 67
Modelled: 67
Confidence: 99.9%
Identity: 45%
Fold: SAM domain-like
Superfamily: SAM/Pointed domain
Family: SAM (sterile alpha motif) domain

Phyre2

PDB 1dxs chain A

3D model

Region: 486 - 542
Aligned: 57
Modelled: 57
Confidence: 99.8%
Identity: 95%
Fold: SAM domain-like
Superfamily: SAM/Pointed domain
Family: SAM (sterile alpha motif) domain

Phyre2

PDB 4a9z chain C

3D model

Region: 343 - 392
Aligned: 50
Modelled: 50
Confidence: 99.7%
Identity: 54%
PDB header:transcription
Chain: C: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of human p63 tetramerization domain

Phyre2

PDB 4a9z chain D

3D model

Region: 343 - 386
Aligned: 44
Modelled: 44
Confidence: 99.6%
Identity: 57%
PDB header:transcription
Chain: D: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of human p63 tetramerization domain

Phyre2

PDB 2wtt chain L

3D model

Region: 345 - 386
Aligned: 42
Modelled: 42
Confidence: 99.6%
Identity: 83%
PDB header:transcription
Chain: L: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)

Phyre2

PDB 2wtt chain H

3D model

Region: 347 - 386
Aligned: 40
Modelled: 40
Confidence: 99.5%
Identity: 85%
PDB header:transcription
Chain: H: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)

Phyre2

PDB 2wtt chain N

3D model

Region: 347 - 386
Aligned: 40
Modelled: 40
Confidence: 99.5%
Identity: 85%
PDB header:transcription
Chain: N: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)

Phyre2

PDB 3zy1 chain A

3D model

Region: 344 - 383
Aligned: 40
Modelled: 40
Confidence: 99.5%
Identity: 53%
PDB header:transcription
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of the human p63 tetramerization domain

Phyre2

PDB 1cok chain A

3D model

Region: 481 - 548
Aligned: 68
Modelled: 68
Confidence: 99.4%
Identity: 93%
Fold: SAM domain-like
Superfamily: SAM/Pointed domain
Family: SAM (sterile alpha motif) domain

Phyre2

PDB 2wqj chain K

3D model

Region: 343 - 372
Aligned: 30
Modelled: 30
Confidence: 98.8%
Identity: 83%
PDB header:transcription
Chain: K: PDB Molecule:tumor protein p73;
PDBTitle: crystal structure of a truncated variant of the human p732 tetramerization domain

Phyre2

PDB 2wqj chain M

3D model

Region: 345 - 372
Aligned: 28
Modelled: 28
Confidence: 98.5%
Identity: 82%
PDB header:transcription
Chain: M: PDB Molecule:tumor protein p73;
PDBTitle: crystal structure of a truncated variant of the human p732 tetramerization domain

Phyre2

PDB 3sak chain A

3D model

Region: 338 - 371
Aligned: 34
Modelled: 34
Confidence: 98.4%
Identity: 38%
Fold: p53 tetramerization domain
Superfamily: p53 tetramerization domain
Family: p53 tetramerization domain

Phyre2

PDB 1t4w chain A

3D model

Region: 135 - 296
Aligned: 152
Modelled: 162
Confidence: 98.1%
Identity: 23%
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: p53-like transcription factors
Family: p53 DNA-binding domain-like

Phyre2

PDB 2e8n chain A

3D model

Region: 471 - 558
Aligned: 82
Modelled: 88
Confidence: 98.1%
Identity: 18%
PDB header:transferase, signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: solution structure of the c-terminal sam-domain of ephaa2:2 ephrin type-a receptor 2 precursor (ec 2.7.10.1)

Phyre2

PDB 2dl0 chain A

3D model

Region: 451 - 543
Aligned: 79
Modelled: 79
Confidence: 97.8%
Identity: 18%
PDB header:signaling protein
Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1;
PDBTitle: solution structure of the sam-domain of the sam and sh32 domain containing protein 1

Phyre2

PDB 2l14 chain B

3D model

Region: 8 - 77
Aligned: 47
Modelled: 47
Confidence: 96.4%
Identity: 32%
PDB header:protein binding
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of cbp nuclear coactivator binding domain in complex with2 p53 tad

Phyre2

PDB 2ly4 chain B

3D model

Region: 8 - 76
Aligned: 46
Modelled: 46
Confidence: 95.7%
Identity: 33%
PDB header:nuclear protein/antitumour protein
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: hmgb1-facilitated p53 dna binding occurs via hmg-box/p532 transactivation domain interaction and is regulated by the acidic3 tail

Phyre2
1
c3q06B_
2
c2rmnA_
3
c2j1xA_
4
c2xipA_
5
d2ac0a1
6
d1hu8a_
7
d1rg6a_
8
d1dxsa_
9
c4a9zC_
10
c4a9zD_
11
c2wttL_
12
c2wttH_
13
c2wttN_
14
c3zy1A_
15
d1coka_
16
c2wqjK_
17
c2wqjM_
18
d3saka_
19
d1t4wa_
20
c2e8nA_
21
22
23
24
25
26
27
28
c2dl0A_
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
c2l14B_
61
62
c2ly4B_
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3q06B_
100.0 55 PDB header:cell cycle/dna
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity
2c2rmnA_
100.0 77 PDB header:cell cycle, antitumor protein
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: the solution structure of the p63 dna-binding domain
3c2j1xA_
100.0 59 PDB header:nuclear protein
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: human p53 core domain mutant m133l-v203a-y220c-n239y-n268d
4c2xipA_
100.0 96 PDB header:cell cycle
Chain: A: PDB Molecule:tumour protein p73;
PDBTitle: crystal structure of the dna binding domain of human tp732 refined at 1.8 a resolution
5d2ac0a1
100.0 59 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:p53-like transcription factors
Family:p53 DNA-binding domain-like
6d1hu8a_
100.0 60 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:p53-like transcription factors
Family:p53 DNA-binding domain-like
7d1rg6a_
99.9 45 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
8d1dxsa_
99.8 95 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
9c4a9zC_
99.7 54 PDB header:transcription
Chain: C: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of human p63 tetramerization domain
10c4a9zD_
99.6 57 PDB header:transcription
Chain: D: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of human p63 tetramerization domain
11c2wttL_
99.6 83 PDB header:transcription
Chain: L: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)
12c2wttH_
99.5 85 PDB header:transcription
Chain: H: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)
13c2wttN_
99.5 85 PDB header:transcription
Chain: N: PDB Molecule:tumor protein p73;
PDBTitle: structure of the human p73 tetramerization domain (crystal2 form ii)
14c3zy1A_
99.5 53 PDB header:transcription
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: crystal structure of the human p63 tetramerization domain
15d1coka_
99.4 93 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
16c2wqjK_
98.8 83 PDB header:transcription
Chain: K: PDB Molecule:tumor protein p73;
PDBTitle: crystal structure of a truncated variant of the human p732 tetramerization domain
17c2wqjM_
98.5 82 PDB header:transcription
Chain: M: PDB Molecule:tumor protein p73;
PDBTitle: crystal structure of a truncated variant of the human p732 tetramerization domain
18d3saka_
98.4 38 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
19d1t4wa_
98.1 23 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:p53-like transcription factors
Family:p53 DNA-binding domain-like
20c2e8nA_
98.1 18 PDB header:transferase, signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: solution structure of the c-terminal sam-domain of ephaa2:2 ephrin type-a receptor 2 precursor (ec 2.7.10.1)
21c2eaoA_
not modelled 98.0 16 PDB header:signaling protein, transferase
Chain: A: PDB Molecule:ephrin type-b receptor 1;
PDBTitle: solution structure of the c-terminal sam-domain of mouse2 ephrin type-b receptor 1 precursor (ec 2.7.1.112)
22c1b0xA_
not modelled 98.0 15 PDB header:transferase
Chain: A: PDB Molecule:protein (epha4 receptor tyrosine kinase);
PDBTitle: the crystal structure of an eph receptor sam domain reveals2 a mechanism for modular dimerization.
23d1b0xa_
not modelled 98.0 15 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
24d1sgga_
not modelled 98.0 18 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
25c3h8mB_
not modelled 97.9 21 PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 7;
PDBTitle: sam domain of human ephrin type-a receptor 7 (epha7)
26d1x40a1
not modelled 97.8 15 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
27c3senD_
not modelled 97.8 17 PDB header:signaling protein
Chain: D: PDB Molecule:caskin-1;
PDBTitle: structure of caskin1 tandem sams
28c2dl0A_
97.8 18 PDB header:signaling protein
Chain: A: PDB Molecule:sam and sh3 domain-containing protein 1;
PDBTitle: solution structure of the sam-domain of the sam and sh32 domain containing protein 1
29c2kg5A_
not modelled 97.8 20 PDB header:signaling protein
Chain: A: PDB Molecule:arf-gap, rho-gap domain, ank repeat and ph
PDBTitle: nmr solution structure of arap3-sam
30c3kkaD_
not modelled 97.8 20 PDB header:transferase
Chain: D: PDB Molecule:ephrin type-a receptor 2;
PDBTitle: co-crystal structure of the sam domains of epha1 and epha2
31c3k1rB_
not modelled 97.8 19 PDB header:structural protein
Chain: B: PDB Molecule:usher syndrome type-1g protein;
PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans
32d1b4fa_
not modelled 97.8 18 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
33d1v38a_
not modelled 97.7 14 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
34c2k4pA_
not modelled 97.6 20 PDB header:signaling protein
Chain: A: PDB Molecule:phosphatidylinositol-3,4,5-trisphosphate 5-
PDBTitle: solution structure of ship2-sam
35d1aiea_
not modelled 97.6 41 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
36d1ucva_
not modelled 97.6 14 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
37c3hilB_
not modelled 97.6 23 PDB header:transferase
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: sam domain of human ephrin type-a receptor 1 (epha1)
38d1hs5a_
not modelled 97.5 41 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
39c2eamA_
not modelled 97.5 16 PDB header:signaling protein
Chain: A: PDB Molecule:putative 47 kda protein;
PDBTitle: solution structure of the n-terminal sam-domain of a human2 putative 47 kda protein
40c1oxjA_
not modelled 97.5 14 PDB header:rna binding protein
Chain: A: PDB Molecule:rna-binding protein smaug;
PDBTitle: crystal structure of the smaug rna binding domain
41d1a1ua_
not modelled 97.5 41 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
42c2lmrA_
not modelled 97.5 20 PDB header:signaling protein
Chain: A: PDB Molecule:ankyrin repeat and sam domain-containing protein 1a;
PDBTitle: solution structure of the first sam domain of odin
43c2j10D_
not modelled 97.4 41 PDB header:transcription
Chain: D: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k
44c2j10A_
not modelled 97.4 41 PDB header:transcription
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k
45c2j10B_
not modelled 97.4 41 PDB header:transcription
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant t329f q331k
46c3zy0C_
not modelled 97.4 58 PDB header:transcription
Chain: C: PDB Molecule:tumor protein p63;
PDBTitle: crystal structure of a truncated variant of the human p632 tetramerization domain lacking the c-terminal helix
47c2fe9A_
not modelled 97.4 17 PDB header:rna binding protein
Chain: A: PDB Molecule:protein vts1;
PDBTitle: solution structure of the vts1 sam domain in the presence2 of rna
48c1ow5A_
not modelled 97.4 25 PDB header:transferase
Chain: A: PDB Molecule:serine/threonine-protein kinase ste11;
PDBTitle: nmr structure of the saccharomyces cerevisiae sam (sterile2 alpha motif) domain
49d1ow5a_
not modelled 97.4 25 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
50c2j11D_
not modelled 97.4 41 PDB header:transcription
Chain: D: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant y327s t329g q331g
51c2ke7A_
not modelled 97.3 17 PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat and sterile alpha motif domain-
PDBTitle: nmr structure of the first sam domain from aida1
52c2kivA_
not modelled 97.3 20 PDB header:signaling protein
Chain: A: PDB Molecule:ankyrin repeat and sterile alpha motif domain-
PDBTitle: aida-1 sam domain tandem
53d1oxja1
not modelled 97.3 18 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
54c2qkqA_
not modelled 97.2 21 PDB header:transferase
Chain: A: PDB Molecule:ephrin type-b receptor 4;
PDBTitle: structure of the sam domain of human ephrin type-b receptor2 4
55c3bq7A_
not modelled 96.9 23 PDB header:transferase
Chain: A: PDB Molecule:diacylglycerol kinase delta;
PDBTitle: sam domain of diacylglycerol kinase delta1 (e35g)
56c2b6gA_
not modelled 96.8 14 PDB header:rna binding protein
Chain: A: PDB Molecule:vts1p;
PDBTitle: rna recognition by the vts1 sam domain
57c2eseA_
not modelled 96.8 14 PDB header:protein/rna complex
Chain: A: PDB Molecule:vts1p;
PDBTitle: structure of the sam domain of vts1p in complex with rna
58c2gleA_
not modelled 96.7 27 PDB header:protein binding
Chain: A: PDB Molecule:neurabin-1;
PDBTitle: solution structure of neurabin sam domain
59d2f3na1
not modelled 96.5 27 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
60c2l14B_
96.4 32 PDB header:protein binding
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of cbp nuclear coactivator binding domain in complex with2 p53 tad
61c3tadB_
not modelled 96.4 26 PDB header:protein binding
Chain: B: PDB Molecule:liprin-alpha-2;
PDBTitle: crystal structure of the liprin-alpha/liprin-beta complex
62c2ly4B_
95.7 33 PDB header:nuclear protein/antitumour protein
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: hmgb1-facilitated p53 dna binding occurs via hmg-box/p532 transactivation domain interaction and is regulated by the acidic3 tail
63c3bs5A_
not modelled 95.5 18 PDB header:signaling protein/membrane protein
Chain: A: PDB Molecule:protein aveugle;
PDBTitle: crystal structure of hcnk2-sam/dhyp-sam complex
64d1wwva1
not modelled 95.5 24 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
65c2dkzA_
not modelled 95.4 26 PDB header:signaling protein
Chain: A: PDB Molecule:hypothetical protein loc64762;
PDBTitle: solution structure of the sam_pnt-domain of the2 hypothetical protein loc64762
66c2eanA_
not modelled 95.2 19 PDB header:signaling protein
Chain: A: PDB Molecule:connector enhancer of kinase suppressor of ras 2;
PDBTitle: solution structure of the n-terminal sam-domain of human2 kiaa0902 protein (connector enhancer of kinase suppressor3 of ras 2)
67c3bs7A_
not modelled 94.6 18 PDB header:signaling protein
Chain: A: PDB Molecule:protein aveugle;
PDBTitle: crystal structure of the sterile alpha motif (sam) domain2 of hyphen/aveugle
68d1pk1c1
not modelled 93.3 18 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
69d1kw4a_
not modelled 93.3 19 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
70d1pk3a1
not modelled 92.6 9 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
71c1pk1A_
not modelled 92.1 20 PDB header:transcription repression
Chain: A: PDB Molecule:polyhomeotic-proximal chromatin protein;
PDBTitle: hetero sam domain structure of ph and scm.
72c2k8fB_
not modelled 90.5 32 PDB header:transferase/transcription
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structural basis for the regulation of p53 function by p300
73c2e8oA_
not modelled 88.9 22 PDB header:signaling protein
Chain: A: PDB Molecule:sam domain and hd domain-containing protein 1;
PDBTitle: solution structure of the n-terminal sam-domain of the sam2 domain and hd domain containing protein 1 (dendritic cell-3 derived ifng-induced protein) (dcip) (monocyte protein 5)4 (mop-5)
74c1pk1B_
not modelled 88.8 9 PDB header:transcription repression
Chain: B: PDB Molecule:sex comb on midleg cg9495-pa;
PDBTitle: hetero sam domain structure of ph and scm.
75c1v85A_
not modelled 88.2 23 PDB header:apoptosis
Chain: A: PDB Molecule:similar to ring finger protein 36;
PDBTitle: sterile alpha motif (sam) domain of mouse bifunctional2 apoptosis regulator
76c2l5yA_
not modelled 80.9 15 PDB header:signaling protein
Chain: A: PDB Molecule:stromal interaction molecule 2;
PDBTitle: nmr structure of calcium-loaded stim2 ef-sam.
77d1uqva_
not modelled 80.4 10 Fold:SAM domain-like
Superfamily:SAM/Pointed domain
Family:SAM (sterile alpha motif) domain
78c1q2iA_
not modelled 59.8 50 PDB header:antitumor protein
Chain: A: PDB Molecule:pnc27;
PDBTitle: nmr solution structure of a peptide from the mdm-2 binding2 domain of the p53 protein that is selectively cytotoxic to3 cancer cells
79c3if8B_
not modelled 51.7 22 PDB header:cell cycle
Chain: B: PDB Molecule:protein zwilch homolog;
PDBTitle: crystal structure of zwilch, a member of the rzz kinetochore complex
80c3no4A_
not modelled 51.2 13 PDB header:hydrolase
Chain: A: PDB Molecule:creatinine amidohydrolase;
PDBTitle: crystal structure of a creatinine amidohydrolase (npun_f1913) from2 nostoc punctiforme pcc 73102 at 2.00 a resolution
81c2rp5A_
not modelled 48.5 19 PDB header:transcription
Chain: A: PDB Molecule:putative uncharacterized protein cep-1;
PDBTitle: solution structure of the oligomerization domain in cep-1
82c2k60A_
not modelled 45.6 19 PDB header:signaling protein
Chain: A: PDB Molecule:protein (stromal interaction molecule 1);
PDBTitle: nmr structure of calcium-loaded stim1 ef-sam
83c3dacB_
not modelled 45.5 36 PDB header:cell cycle
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of the human mdmx protein bound to the p53 tumor2 suppressor transactivation domain
84d2a1ja1
not modelled 41.7 15 Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
85c3dacP_
not modelled 37.7 42 PDB header:cell cycle
Chain: P: PDB Molecule:cellular tumor antigen p53;
PDBTitle: structure of the human mdmx protein bound to the p53 tumor2 suppressor transactivation domain
86c3gycB_
not modelled 33.5 57 PDB header:hydrolase
Chain: B: PDB Molecule:putative glycoside hydrolase;
PDBTitle: crystal structure of putative glycoside hydrolase (yp_001304622.1)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution
87c2xseA_
not modelled 31.5 56 PDB header:oxidoreductase
Chain: A: PDB Molecule:thymine dioxygenase jbp1;
PDBTitle: the structural basis for recognition of j-base containing2 dna by a novel dna-binding domain in jbp1
88d2aq0a1
not modelled 30.6 13 Fold:SAM domain-like
Superfamily:RuvA domain 2-like
Family:Hef domain-like
89d1b22a_
not modelled 29.6 10 Fold:SAM domain-like
Superfamily:Rad51 N-terminal domain-like
Family:DNA repair protein Rad51, N-terminal domain
90c1b22A_
not modelled 29.6 10 PDB header:dna binding protein
Chain: A: PDB Molecule:dna repair protein rad51;
PDBTitle: rad51 (n-terminal domain)
91c2xdvA_
not modelled 28.8 17 PDB header:nuclear protein
Chain: A: PDB Molecule:myc-induced nuclear antigen;
PDBTitle: crystal structure of the catalytic domain of flj14393
92c1v9pB_
not modelled 27.6 19 PDB header:ligase
Chain: B: PDB Molecule:dna ligase;
PDBTitle: crystal structure of nad+-dependent dna ligase
93c3cguB_
not modelled 27.4 44 PDB header:hormone/signaling protein
Chain: B: PDB Molecule:protein giant-lens;
PDBTitle: crystal structure of unliganded argos
94c3lubE_
not modelled 27.2 19 PDB header:hydrolase
Chain: E: PDB Molecule:putative creatinine amidohydrolase;
PDBTitle: crystal structure of putative creatinine amidohydrolase2 (yp_211512.1) from bacteroides fragilis nctc 9343 at 2.11 a3 resolution
95c3nb2B_
not modelled 26.7 17 PDB header:ligase
Chain: B: PDB Molecule:secreted effector protein;
PDBTitle: crystal structure of e. coli o157:h7 effector protein nlel
96c4joiA_
not modelled 25.4 11 PDB header:dna binding protein
Chain: A: PDB Molecule:cst complex subunit stn1;
PDBTitle: crystal structure of the human telomeric stn1-ten1 complex
97c2owoA_
not modelled 24.7 19 PDB header:ligase/dna
Chain: A: PDB Molecule:dna ligase;
PDBTitle: last stop on the road to repair: structure of e.coli dna ligase bound2 to nicked dna-adenylate
98d1lb2b_
not modelled 23.9 19 Fold:SAM domain-like
Superfamily:C-terminal domain of RNA polymerase alpha subunit
Family:C-terminal domain of RNA polymerase alpha subunit
99d1doqa_
not modelled 23.7 22 Fold:SAM domain-like
Superfamily:C-terminal domain of RNA polymerase alpha subunit
Family:C-terminal domain of RNA polymerase alpha subunit
100c4akaA_
not modelled 23.3 42 PDB header:immune system
Chain: A: PDB Molecule:il-4-inducing protein;
PDBTitle: ipse alpha-1, an ige-binding crystallin
101d1v7za_
not modelled 23.2 44 Fold:Creatininase
Superfamily:Creatininase
Family:Creatininase
102d1cooa_
not modelled 22.3 19 Fold:SAM domain-like
Superfamily:C-terminal domain of RNA polymerase alpha subunit
Family:C-terminal domain of RNA polymerase alpha subunit
103d1jx4a2
not modelled 22.1 8 Fold:DNA/RNA polymerases
Superfamily:DNA/RNA polymerases
Family:Lesion bypass DNA polymerase (Y-family), catalytic domain
104c4diqA_
not modelled 22.0 25 PDB header:oxidoreductase
Chain: A: PDB Molecule:lysine-specific demethylase no66;
PDBTitle: crystal structure of human no66

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