Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ9DB75
DateTue Jul 30 13:11:58 BST 2013
Unique Job IDb5a3457121c54f90
SequenceMSNEPPPPYP ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:17.150 Y:38.456 Z:12.976
Model (left) based on template c2joxA_
Top template information
PDB header:transcription
Chain: A: PDB Molecule:churchill protein;
PDBTitle: embryonic neural inducing factor churchill is not a dna-2 binding zinc finger protein: solution structure reveals a3 solvent-exposed beta-sheet and zinc binuclear cluster
Confidence and coverage
Confidence: 72.5% Coverage: 9%
18 residues ( 9% of your sequence) have been modelled with 72.5% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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Warning: 65% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
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Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MSNEPPPPYPGGPTAPLLEEKSGAPLTPGRTSPAVMQPPPGMPLPSADIAPPPYEPPGQP
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  VPQPGFVPPHMNADGTYMPAGFYPPPGPHPPMGYYPPGPYPPGPYPGPGGHTATVLVPSG
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  AATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLI
Secondary structure 
SS confidence 
Disorder  ????
???????
Disorder confidence 
 
   .........190.........200........
Sequence  PCLINDFKDVTHTCPSCKAYICTYKRLC
Secondary structure 
SS confidence 
Disorder 
????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered ( 65%)
Alpha helix ( 14%)
Beta strand ( 13%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2jox chain A

3D model

Region: 191 - 208
Aligned: 18
Modelled: 18
Confidence: 72.5%
Identity: 22%
PDB header:transcription
Chain: A: PDB Molecule:churchill protein;
PDBTitle: embryonic neural inducing factor churchill is not a dna-2 binding zinc finger protein: solution structure reveals a3 solvent-exposed beta-sheet and zinc binuclear cluster

Phyre2

PDB 1hk8 chain A

3D model

Region: 184 - 208
Aligned: 25
Modelled: 25
Confidence: 59.7%
Identity: 32%
PDB header:oxidoreductase
Chain: A: PDB Molecule:anaerobic ribonucleotide-triphosphate reductase;
PDBTitle: structural basis for allosteric substrate specificity2 regulation in class iii ribonucleotide reductases:3 nrdd in complex with dgtp

Phyre2

PDB 1hk8 chain A

3D model

Region: 184 - 208
Aligned: 25
Modelled: 25
Confidence: 59.7%
Identity: 32%
Fold: PFL-like glycyl radical enzymes
Superfamily: PFL-like glycyl radical enzymes
Family: Class III anaerobic ribonucleotide reductase NRDD subunit

Phyre2

PDB 2ct1 chain A domain 1

3D model

Region: 190 - 207
Aligned: 18
Modelled: 18
Confidence: 57.4%
Identity: 28%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: Classic zinc finger, C2H2

Phyre2

PDB 2opf chain A

3D model

Region: 142 - 199
Aligned: 26
Modelled: 26
Confidence: 54.4%
Identity: 23%
PDB header:hydrolase/dna
Chain: A: PDB Molecule:endonuclease viii;
PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate

Phyre2

PDB 3eb6 chain A

3D model

Region: 182 - 207
Aligned: 26
Modelled: 26
Confidence: 53.6%
Identity: 23%
PDB header:apoptosis, ligase
Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 3;
PDBTitle: structure of the ciap2 ring domain bound to ubch5b

Phyre2

PDB 1k82 chain D

3D model

Region: 142 - 199
Aligned: 26
Modelled: 26
Confidence: 46.7%
Identity: 23%
PDB header:hydrolase/dna
Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna

Phyre2

PDB 4a17 chain Y

3D model

Region: 184 - 208
Aligned: 25
Modelled: 25
Confidence: 46.5%
Identity: 20%
PDB header:ribosome
Chain: Y: PDB Molecule:rpl37a;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2.

Phyre2

PDB 3fl2 chain A

3D model

Region: 178 - 207
Aligned: 30
Modelled: 30
Confidence: 45.3%
Identity: 20%
PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1;
PDBTitle: crystal structure of the ring domain of the e3 ubiquitin-2 protein ligase uhrf1

Phyre2

PDB 3zf7 chain O

3D model

Region: 184 - 208
Aligned: 23
Modelled: 25
Confidence: 44.4%
Identity: 17%
PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l13a, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome

Phyre2

PDB 2yho chain E

3D model

Region: 182 - 207
Aligned: 26
Modelled: 26
Confidence: 43.3%
Identity: 12%
PDB header:ligase
Chain: E: PDB Molecule:e3 ubiquitin-protein ligase mylip;
PDBTitle: the idol-ube2d complex mediates sterol-dependent degradation of the2 ldl receptor

Phyre2

PDB 3cc4 chain Z

3D model

Region: 184 - 208
Aligned: 23
Modelled: 25
Confidence: 43.1%
Identity: 26%
PDB header:ribosome
Chain: Z: PDB Molecule:50s ribosomal protein l37ae;
PDBTitle: co-crystal structure of anisomycin bound to the 50s ribosomal subunit

Phyre2

PDB 2kdx chain A

3D model

Region: 131 - 199
Aligned: 33
Modelled: 33
Confidence: 42.8%
Identity: 27%
PDB header:metal-binding protein
Chain: A: PDB Molecule:hydrogenase/urease nickel incorporation protein
PDBTitle: solution structure of hypa protein

Phyre2

PDB 2con chain A domain 1

3D model

Region: 183 - 199
Aligned: 17
Modelled: 17
Confidence: 40.1%
Identity: 18%
Fold: Rubredoxin-like
Superfamily: NOB1 zinc finger-like
Family: NOB1 zinc finger-like

Phyre2

PDB 2f5q chain A

3D model

Region: 142 - 199
Aligned: 26
Modelled: 26
Confidence: 39.7%
Identity: 46%
PDB header:hydrolase/dna
Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase;
PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2

Phyre2

PDB 2ea5 chain A

3D model

Region: 182 - 207
Aligned: 26
Modelled: 26
Confidence: 39.1%
Identity: 23%
PDB header:cell cycle
Chain: A: PDB Molecule:cell growth regulator with ring finger domain
PDBTitle: solution structure of the ring domain of the human cell2 growth regulator with ring finger domain 1 protein

Phyre2

PDB 2qa4 chain Z

3D model

Region: 184 - 208
Aligned: 23
Modelled: 25
Confidence: 38.9%
Identity: 26%
PDB header:ribosome
Chain: Z: PDB Molecule:50s ribosomal protein l37ae;
PDBTitle: a more complete structure of the the l7/l12 stalk of the2 haloarcula marismortui 50s large ribosomal subunit

Phyre2

PDB 1z6u chain A

3D model

Region: 178 - 207
Aligned: 30
Modelled: 30
Confidence: 35.8%
Identity: 23%
PDB header:ligase
Chain: A: PDB Molecule:np95-like ring finger protein isoform b;
PDBTitle: np95-like ring finger protein isoform b [homo sapiens]

Phyre2

PDB 1ffk chain W

3D model

Region: 184 - 208
Aligned: 23
Modelled: 25
Confidence: 35.7%
Identity: 22%
Fold: Rubredoxin-like
Superfamily: Zn-binding ribosomal proteins
Family: Ribosomal protein L37ae

Phyre2

PDB 2djb chain A

3D model

Region: 182 - 207
Aligned: 26
Modelled: 26
Confidence: 35.1%
Identity: 19%
PDB header:gene regulation
Chain: A: PDB Molecule:polycomb group ring finger protein 6;
PDBTitle: solution structure of the ring domain of the human polycomb2 group ring finger protein 6

Phyre2
1
c2joxA_
2
c1hk8A_
3
d1hk8a_
4
d2ct1a1
5
c2opfA_
6
c3eb6A_
7
c1k82D_
8
c4a17Y_
9
c3fl2A_
10
c3zf7o_
11
c2yhoE_
12
c3cc4Z_
13
c2kdxA_
14
d2cona1
15
c2f5qA_
16
c2ea5A_
17
c2qa4Z_
18
c1z6uA_
19
d1ffkw_
20
c2djbA_
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
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53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
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90
91
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94
95
96
97
98
99



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2joxA_
72.5 22 PDB header:transcription
Chain: A: PDB Molecule:churchill protein;
PDBTitle: embryonic neural inducing factor churchill is not a dna-2 binding zinc finger protein: solution structure reveals a3 solvent-exposed beta-sheet and zinc binuclear cluster
2c1hk8A_
59.7 32 PDB header:oxidoreductase
Chain: A: PDB Molecule:anaerobic ribonucleotide-triphosphate reductase;
PDBTitle: structural basis for allosteric substrate specificity2 regulation in class iii ribonucleotide reductases:3 nrdd in complex with dgtp
3d1hk8a_
59.7 32 Fold:PFL-like glycyl radical enzymes
Superfamily:PFL-like glycyl radical enzymes
Family:Class III anaerobic ribonucleotide reductase NRDD subunit
4d2ct1a1
57.4 28 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
5c2opfA_
54.4 23 PDB header:hydrolase/dna
Chain: A: PDB Molecule:endonuclease viii;
PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate
6c3eb6A_
53.6 23 PDB header:apoptosis, ligase
Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 3;
PDBTitle: structure of the ciap2 ring domain bound to ubch5b
7c1k82D_
46.7 23 PDB header:hydrolase/dna
Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna
8c4a17Y_
46.5 20 PDB header:ribosome
Chain: Y: PDB Molecule:rpl37a;
PDBTitle: t.thermophila 60s ribosomal subunit in complex with2 initiation factor 6. this file contains 5s rrna,3 5.8s rrna and proteins of molecule 2.
9c3fl2A_
45.3 20 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1;
PDBTitle: crystal structure of the ring domain of the e3 ubiquitin-2 protein ligase uhrf1
10c3zf7o_
44.4 17 PDB header:ribosome
Chain: O: PDB Molecule:60s ribosomal protein l13a, putative;
PDBTitle: high-resolution cryo-electron microscopy structure of the trypanosoma2 brucei ribosome
11c2yhoE_
43.3 12 PDB header:ligase
Chain: E: PDB Molecule:e3 ubiquitin-protein ligase mylip;
PDBTitle: the idol-ube2d complex mediates sterol-dependent degradation of the2 ldl receptor
12c3cc4Z_
43.1 26 PDB header:ribosome
Chain: Z: PDB Molecule:50s ribosomal protein l37ae;
PDBTitle: co-crystal structure of anisomycin bound to the 50s ribosomal subunit
13c2kdxA_
42.8 27 PDB header:metal-binding protein
Chain: A: PDB Molecule:hydrogenase/urease nickel incorporation protein
PDBTitle: solution structure of hypa protein
14d2cona1
40.1 18 Fold:Rubredoxin-like
Superfamily:NOB1 zinc finger-like
Family:NOB1 zinc finger-like
15c2f5qA_
39.7 46 PDB header:hydrolase/dna
Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase;
PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2
16c2ea5A_
39.1 23 PDB header:cell cycle
Chain: A: PDB Molecule:cell growth regulator with ring finger domain
PDBTitle: solution structure of the ring domain of the human cell2 growth regulator with ring finger domain 1 protein
17c2qa4Z_
38.9 26 PDB header:ribosome
Chain: Z: PDB Molecule:50s ribosomal protein l37ae;
PDBTitle: a more complete structure of the the l7/l12 stalk of the2 haloarcula marismortui 50s large ribosomal subunit
18c1z6uA_
35.8 23 PDB header:ligase
Chain: A: PDB Molecule:np95-like ring finger protein isoform b;
PDBTitle: np95-like ring finger protein isoform b [homo sapiens]
19d1ffkw_
35.7 22 Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
20c2djbA_
35.1 19 PDB header:gene regulation
Chain: A: PDB Molecule:polycomb group ring finger protein 6;
PDBTitle: solution structure of the ring domain of the human polycomb2 group ring finger protein 6
21d1v87a_
not modelled 34.9 36 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
22d1x63a2
not modelled 34.3 50 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
23d1fbva4
not modelled 34.2 20 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
24c2lo2A_
not modelled 34.2 17 PDB header:transcription
Chain: A: PDB Molecule:saga-associated factor 11;
PDBTitle: solution structure of sgf11(63-99) zinc finger domain
25c2eclA_
not modelled 34.1 17 PDB header:metal binding protein
Chain: A: PDB Molecule:ring-box protein 2;
PDBTitle: solution structure of the ring domain of the human ring-box2 protein 2
26c2ecgA_
not modelled 33.6 15 PDB header:apoptosis
Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 4;
PDBTitle: solution structure of the ring domain of the baculoviral2 iap repeat-containing protein 4 from homo sapiens
27c2bi6H_
not modelled 33.4 26 PDB header:cysteine protease inhibitor
Chain: H: PDB Molecule:bromelain inhibitor vi;
PDBTitle: nmr study of bromelain inhibitor vi from pineapple stem
28c3twkB_
not modelled 33.1 10 PDB header:hydrolase
Chain: B: PDB Molecule:formamidopyrimidine-dna glycosylase 1;
PDBTitle: crystal structure of arabidopsis thaliana fpg
29c2kluA_
not modelled 33.1 13 PDB header:immune system, membrane protein
Chain: A: PDB Molecule:t-cell surface glycoprotein cd4;
PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
30c1bi6H_
not modelled 32.2 26 PDB header:cysteine protease inhibitor
Chain: H: PDB Molecule:bromelain inhibitor vi;
PDBTitle: nmr structure of bromelain inhibitor vi from pineapple stem
31d1iyma_
not modelled 32.1 21 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
32d1lv3a_
not modelled 31.8 18 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:Hypothetical zinc finger protein YacG
33c2d8tA_
not modelled 31.6 16 PDB header:metal binding protein
Chain: A: PDB Molecule:ring finger protein 146;
PDBTitle: solution structure of the ring domain of the human ring2 finger protein 146
34c2jvxA_
not modelled 31.3 27 PDB header:metal binding protein
Chain: A: PDB Molecule:nf-kappa-b essential modulator;
PDBTitle: solution structure of human nemo zinc finger
35d1jj2y_
not modelled 30.1 26 Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
36c1nnjA_
not modelled 29.9 46 PDB header:hydrolase
Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna
37c2jmdA_
not modelled 29.8 30 PDB header:ligase
Chain: A: PDB Molecule:tnf receptor-associated factor 6;
PDBTitle: solution structure of the ring domain of human traf6
38d1vdda_
not modelled 29.1 29 Fold:Recombination protein RecR
Superfamily:Recombination protein RecR
Family:Recombination protein RecR
39d1x6ma_
not modelled 28.5 27 Fold:Mss4-like
Superfamily:Mss4-like
Family:Glutathione-dependent formaldehyde-activating enzyme, Gfa
40c2lcqA_
not modelled 28.4 25 PDB header:metal binding protein
Chain: A: PDB Molecule:putative toxin vapc6;
PDBTitle: solution structure of the endonuclease nob1 from p.horikoshii
41d1vqoz1
not modelled 28.2 27 Fold:Rubredoxin-like
Superfamily:Zn-binding ribosomal proteins
Family:Ribosomal protein L37ae
42c1yshD_
not modelled 27.9 18 PDB header:structural protein/rna
Chain: D: PDB Molecule:ribosomal protein l37a;
PDBTitle: localization and dynamic behavior of ribosomal protein l30e
43c1vddC_
not modelled 27.7 29 PDB header:recombination
Chain: C: PDB Molecule:recombination protein recr;
PDBTitle: crystal structure of recombinational repair protein recr
44c4epoL_
not modelled 27.7 32 PDB header:protein binding/ligase
Chain: L: PDB Molecule:e3 ubiquitin-protein ligase rnf8;
PDBTitle: crystal structure of rnf8 bound to the ubc13/mms2 heterodimer
45c3vk6A_
not modelled 27.2 23 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase hakai;
PDBTitle: crystal structure of a phosphotyrosine binding domain
46c4b6ap_
not modelled 26.9 22 PDB header:ribosome
Chain: P: PDB Molecule:60s ribosomal protein l17-a;
PDBTitle: cryo-em structure of the 60s ribosomal subunit in complex2 with arx1 and rei1
47c2h0dB_
not modelled 25.4 21 PDB header:metal binding protein/ligase
Chain: B: PDB Molecule:ubiquitin ligase protein ring2;
PDBTitle: structure of a bmi-1-ring1b polycomb group ubiquitin ligase complex
48d1wiia_
not modelled 25.4 23 Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:Putative zinc binding domain
49c2hdpB_
not modelled 24.9 19 PDB header:ligase
Chain: B: PDB Molecule:ubiquitin-protein ligase e3 mdm2;
PDBTitle: solution structure of hdm2 ring finger domain
50c1ee8A_
not modelled 24.7 35 PDB header:dna binding protein
Chain: A: PDB Molecule:mutm (fpg) protein;
PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8
51c3j39p_
not modelled 24.7 19 PDB header:ribosome
Chain: P: PDB Molecule:60s ribosomal protein l17;
PDBTitle: structure of the d. melanogaster 60s ribosomal proteins
52c3na7A_
not modelled 24.5 31 PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874
53c2lo4A_
not modelled 24.4 36 PDB header:protein transport
Chain: A: PDB Molecule:optineurin;
PDBTitle: nmr solution structure of optineurin zinc-finger domain
54c1s1i9_
not modelled 24.0 13 PDB header:ribosome
Chain: 9: PDB Molecule:60s ribosomal protein l43;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h.
55c2zkrz_
not modelled 23.8 25 PDB header:ribosomal protein/rna
Chain: Z: PDB Molecule:e site t-rna;
PDBTitle: structure of a mammalian ribosomal 60s subunit within an 80s complex2 obtained by docking homology models of the rna and proteins into an3 8.7 a cryo-em map
56c2jvyA_
not modelled 23.7 27 PDB header:metal binding protein
Chain: A: PDB Molecule:nf-kappa-b essential modulator;
PDBTitle: solution structure of the eda-id-related c417f mutant of2 human nemo zinc finger
57c2vjfB_
not modelled 23.5 24 PDB header:ligase
Chain: B: PDB Molecule:mdm4 protein;
PDBTitle: crystal structure of the mdm2-mdmx ring domain heterodimer
58c3jyw9_
not modelled 23.2 13 PDB header:ribosome
Chain: 9: PDB Molecule:60s ribosomal protein l43;
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
59c2l0bA_
not modelled 23.2 21 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase praja-1;
PDBTitle: solution nmr structure of zinc finger domain of e3 ubiquitin-protein2 ligase praja-1 from homo sapiens, northeast structural genomics3 consortium (nesg) target hr4710b
60c3j21i_
not modelled 23.1 31 PDB header:ribosome
Chain: I: PDB Molecule:50s ribosomal protein l13p;
PDBTitle: promiscuous behavior of proteins in archaeal ribosomes revealed by2 cryo-em: implications for evolution of eukaryotic ribosomes (50s3 ribosomal proteins)
61c3l11A_
not modelled 22.6 21 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf168;
PDBTitle: crystal structure of the ring domain of rnf168
62c2ecyA_
not modelled 22.2 20 PDB header:apoptosis
Chain: A: PDB Molecule:tnf receptor-associated factor 3;
PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger)" domain of tnf receptor-associated factor 3
63d1qf8a_
not modelled 21.5 35 Fold:Rubredoxin-like
Superfamily:Casein kinase II beta subunit
Family:Casein kinase II beta subunit
64c2ecmA_
not modelled 21.5 16 PDB header:metal binding protein
Chain: A: PDB Molecule:ring finger and chy zinc finger domain-
PDBTitle: solution structure of the ring domain of the ring finger2 and chy zinc finger domain-containing protein 1 from mus3 musculus
65c3izrm_
not modelled 21.3 13 PDB header:ribosome
Chain: M: PDB Molecule:60s ribosomal protein l23 (l14p);
PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
66d1g25a_
not modelled 21.1 21 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
67d1e4ua_
not modelled 21.1 25 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
68d2fu5a1
not modelled 20.9 11 Fold:Mss4-like
Superfamily:Mss4-like
Family:RabGEF Mss4
69c3facE_
not modelled 20.7 25 PDB header:unknown function
Chain: E: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of rhodobacter sphaeroides protein2 rsp_2168. northeast structural genomics target rhr83.
70c1x4jA_
not modelled 20.7 26 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ring finger protein 38;
PDBTitle: solution structure of ring finger in ring finger protein 38
71c2ep4A_
not modelled 20.4 20 PDB header:protein binding
Chain: A: PDB Molecule:ring finger protein 24;
PDBTitle: solution structure of ring finger from human ring finger2 protein 24
72c2kn9A_
not modelled 20.3 24 PDB header:electron transport
Chain: A: PDB Molecule:rubredoxin;
PDBTitle: solution structure of zinc-substituted rubredoxin b (rv3250c) from2 mycobacterium tuberculosis. seattle structural genomics center for3 infectious disease target mytud.01635.a
73d1rb9a_
not modelled 20.3 38 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
74d1zvfa1
not modelled 19.7 13 Fold:Double-stranded beta-helix
Superfamily:RmlC-like cupins
Family:3-hydroxyanthranilic acid dioxygenase-like
75c1zzaA_
not modelled 19.5 15 PDB header:membrane protein
Chain: A: PDB Molecule:stannin;
PDBTitle: solution nmr structure of the membrane protein stannin
76d2dsxa1
not modelled 19.3 33 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
77d1hxra_
not modelled 19.1 11 Fold:Mss4-like
Superfamily:Mss4-like
Family:RabGEF Mss4
78d1s24a_
not modelled 19.1 33 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
79c1s24A_
not modelled 19.1 33 PDB header:electron transport
Chain: A: PDB Molecule:rubredoxin 2;
PDBTitle: rubredoxin domain ii from pseudomonas oleovorans
80c2m4yA_
not modelled 19.0 25 PDB header:electron transport
Chain: A: PDB Molecule:rubredoxin;
PDBTitle: rubredoxin type protein from mycobacterium ulcerans
81d1qcva_
not modelled 18.8 29 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
82d2rdva_
not modelled 18.6 43 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
83d4rxna_
not modelled 18.2 38 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
84c2kizA_
not modelled 18.1 21 PDB header:metal binding protein
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase arkadia;
PDBTitle: solution structure of arkadia ring-h2 finger domain
85d1dx8a_
not modelled 18.1 24 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
86d1ee8a3
not modelled 17.8 50 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
87c2cklB_
not modelled 17.7 20 PDB header:transcription
Chain: B: PDB Molecule:ubiquitin ligase protein ring2;
PDBTitle: ring1b-bmi1 e3 catalytic domain structure
88c2m0eA_
not modelled 17.7 40 PDB header:transcription
Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 17;
PDBTitle: solution structure of miz-1 zinc finger 6
89d1brfa_
not modelled 17.7 38 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
90c3vhsB_
not modelled 17.6 55 PDB header:metal binding protein
Chain: B: PDB Molecule:atpase wrnip1;
PDBTitle: crystal structure of ubz of human wrnip1
91c2xeuA_
not modelled 17.5 32 PDB header:transcription
Chain: A: PDB Molecule:ring finger protein 4;
PDBTitle: ring domain
92c3vhsA_
not modelled 17.5 55 PDB header:metal binding protein
Chain: A: PDB Molecule:atpase wrnip1;
PDBTitle: crystal structure of ubz of human wrnip1
93d1iroa_
not modelled 17.4 38 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
94d1h7va_
not modelled 17.4 24 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
95c2ysoA_
not modelled 17.3 24 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 656-2 688) of human zinc finger protein 95 homolog
96c1z60A_
not modelled 17.2 38 PDB header:transcription
Chain: A: PDB Molecule:tfiih basal transcription factor complex p44
PDBTitle: solution structure of the carboxy-terminal domain of human2 tfiih p44 subunit
97d1z60a1
not modelled 17.2 38 Fold:Cysteine-rich domain
Superfamily:Cysteine-rich domain
Family:TFIIH p44 subunit cysteine-rich domain
98d1iu5a_
not modelled 17.1 43 Fold:Rubredoxin-like
Superfamily:Rubredoxin-like
Family:Rubredoxin
99d1jwhc_
not modelled 17.0 35 Fold:Rubredoxin-like
Superfamily:Casein kinase II beta subunit
Family:Casein kinase II beta subunit

Binding site prediction 

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