Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ8BGA5
DateTue Jul 30 13:13:37 BST 2013
Unique Job ID4f4a6d0a2398fc8c
SequenceMATSAEAPAK ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:58.849 Y:44.854 Z:57.971
Model (left) based on template c1tuaA_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ape0754;
PDBTitle: 1.5 a crystal structure of a protein of unknown function2 ape0754 from aeropyrum pernix
Confidence and coverage
Confidence: 99.9% Coverage: 47%
179 residues ( 47% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
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Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MATSAEAPAKEAQKRDSQPQKQKRETQDEAELLTVPDGWKEPAFSKEDNPRGLLEESSFA
Secondary structure 
SS confidence 
Disorder  ???????????????????????????????????????
??
??????
??
????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  TLFPKYREAYLKECWPLVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPYIIIRARDLIK
Secondary structure 
SS confidence 
Disorder 
??
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  LLARSVSFEQAVRILQDDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNC
Secondary structure 
SS confidence 
Disorder 
?
???
?
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  YVMVQGNTVSAIGPFSGLKEVRKVVLDTMKNIHPIYNIKTLMIKRELAKDSELRSQSWER
Secondary structure 
SS confidence 
Disorder 
???
??
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  FLPQFKHKNVNKRKEPKKKSVKKEYTPFPPPQPESQIDKELASGEYFLKASQKKRQKMEA
Secondary structure 
SS confidence 
Disorder 
????????????????????????????
?
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  IKAKQAEALTKRQEERNKAFIPPKEKPAVKPKEASTETKIDVAAIKEKVKKAKTKKLGAL
Secondary structure 
SS confidence 
Disorder 
????????????????????
??
???????
Disorder confidence 
 
   .........370.........380
Sequence  TAEEVKLKMEADEKKQKRKK
Secondary structure 
SS confidence 
Disorder 
???
???
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered ( 34%)
Alpha helix ( 60%)
Beta strand ( 11%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1tua chain A

3D model

Region: 59 - 240
Aligned: 179
Modelled: 182
Confidence: 99.9%
Identity: 19%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ape0754;
PDBTitle: 1.5 a crystal structure of a protein of unknown function2 ape0754 from aeropyrum pernix

Phyre2

PDB 1tua chain A domain 2

3D model

Region: 138 - 240
Aligned: 100
Modelled: 103
Confidence: 99.8%
Identity: 23%
Fold: Eukaryotic type KH-domain (KH-domain type I)
Superfamily: Eukaryotic type KH-domain (KH-domain type I)
Family: Eukaryotic type KH-domain (KH-domain type I)

Phyre2

PDB 2e3u chain A

3D model

Region: 57 - 210
Aligned: 150
Modelled: 154
Confidence: 99.6%
Identity: 28%
PDB header:rna binding protein
Chain: A: PDB Molecule:hypothetical protein ph1566;
PDBTitle: crystal structure analysis of dim2p from pyrococcus horikoshii ot3

Phyre2

PDB 1tua chain A domain 1

3D model

Region: 61 - 137
Aligned: 77
Modelled: 77
Confidence: 98.3%
Identity: 16%
Fold: Eukaryotic type KH-domain (KH-domain type I)
Superfamily: Eukaryotic type KH-domain (KH-domain type I)
Family: Eukaryotic type KH-domain (KH-domain type I)

Phyre2

PDB 2yqr chain A

3D model

Region: 160 - 217
Aligned: 58
Modelled: 58
Confidence: 98.0%
Identity: 22%
PDB header:rna binding protein
Chain: A: PDB Molecule:kiaa0907 protein;
PDBTitle: solution structure of the kh domain in kiaa0907 protein

Phyre2

PDB 3krm chain B

3D model

Region: 56 - 212
Aligned: 142
Modelled: 157
Confidence: 97.9%
Identity: 17%
PDB header:rna binding protein
Chain: B: PDB Molecule:insulin-like growth factor 2 mrna-binding protein
PDBTitle: imp1 kh34

Phyre2

PDB 2jzx chain A

3D model

Region: 58 - 210
Aligned: 144
Modelled: 153
Confidence: 97.8%
Identity: 16%
PDB header:rna binding protein
Chain: A: PDB Molecule:poly(rc)-binding protein 2;
PDBTitle: pcbp2 kh1-kh2 domains

Phyre2

PDB 1k1g chain A

3D model

Region: 160 - 216
Aligned: 57
Modelled: 57
Confidence: 97.7%
Identity: 25%
Fold: Eukaryotic type KH-domain (KH-domain type I)
Superfamily: Eukaryotic type KH-domain (KH-domain type I)
Family: Eukaryotic type KH-domain (KH-domain type I)

Phyre2

PDB 1x4n chain A domain 1

3D model

Region: 157 - 211
Aligned: 55
Modelled: 55
Confidence: 97.7%
Identity: 9%
Fold: Eukaryotic type KH-domain (KH-domain type I)
Superfamily: Eukaryotic type KH-domain (KH-domain type I)
Family: Eukaryotic type KH-domain (KH-domain type I)

Phyre2

PDB 1j4w chain A

3D model

Region: 56 - 209
Aligned: 133
Modelled: 154
Confidence: 97.6%
Identity: 15%
PDB header:transcription/dna
Chain: A: PDB Molecule:fuse binding protein;
PDBTitle: complex of the kh3 and kh4 domains of fbp with a2 single_stranded 29mer dna oligonucleotide from the fuse3 element of the c-myc oncogene

Phyre2

PDB 2jvz chain A

3D model

Region: 57 - 212
Aligned: 150
Modelled: 156
Confidence: 97.5%
Identity: 12%
PDB header:splicing
Chain: A: PDB Molecule:far upstream element-binding protein 2;
PDBTitle: solution nmr structure of the second and third kh domains2 of ksrp

Phyre2

PDB 4jvh chain A

3D model

Region: 160 - 228
Aligned: 69
Modelled: 68
Confidence: 97.5%
Identity: 32%
PDB header:rna binding protein
Chain: A: PDB Molecule:protein quaking;
PDBTitle: structure of the star domain of quaking protein in complex with rna

Phyre2

PDB 2hh2 chain A

3D model

Region: 161 - 215
Aligned: 55
Modelled: 55
Confidence: 97.5%
Identity: 20%
PDB header:rna binding protein
Chain: A: PDB Molecule:kh-type splicing regulatory protein;
PDBTitle: solution structure of the fourth kh domain of ksrp

Phyre2

PDB 4b8t chain A

3D model

Region: 161 - 213
Aligned: 53
Modelled: 53
Confidence: 97.4%
Identity: 15%
PDB header:transcription/rna
Chain: A: PDB Molecule:kh-type splicing regulatory protein;
PDBTitle: rna binding protein solution structure of the third kh2 domain of ksrp in complex with the g-rich target sequence.

Phyre2

PDB 2ctk chain A domain 1

3D model

Region: 157 - 221
Aligned: 65
Modelled: 65
Confidence: 97.4%
Identity: 17%
Fold: Eukaryotic type KH-domain (KH-domain type I)
Superfamily: Eukaryotic type KH-domain (KH-domain type I)
Family: Eukaryotic type KH-domain (KH-domain type I)

Phyre2

PDB 1khm chain A

3D model

Region: 157 - 210
Aligned: 54
Modelled: 54
Confidence: 97.4%
Identity: 11%
Fold: Eukaryotic type KH-domain (KH-domain type I)
Superfamily: Eukaryotic type KH-domain (KH-domain type I)
Family: Eukaryotic type KH-domain (KH-domain type I)

Phyre2

PDB 3n89 chain B

3D model

Region: 53 - 209
Aligned: 133
Modelled: 157
Confidence: 97.4%
Identity: 11%
PDB header:cell cycle
Chain: B: PDB Molecule:defective in germ line development protein 3, isoform a;
PDBTitle: kh domains

Phyre2

PDB 1we8 chain A

3D model

Region: 161 - 211
Aligned: 51
Modelled: 51
Confidence: 97.4%
Identity: 16%
Fold: Eukaryotic type KH-domain (KH-domain type I)
Superfamily: Eukaryotic type KH-domain (KH-domain type I)
Family: Eukaryotic type KH-domain (KH-domain type I)

Phyre2

PDB 2ba0 chain A domain 3

3D model

Region: 161 - 213
Aligned: 53
Modelled: 53
Confidence: 97.4%
Identity: 23%
Fold: Eukaryotic type KH-domain (KH-domain type I)
Superfamily: Eukaryotic type KH-domain (KH-domain type I)
Family: Eukaryotic type KH-domain (KH-domain type I)

Phyre2

PDB 2hh3 chain A

3D model

Region: 161 - 212
Aligned: 52
Modelled: 52
Confidence: 97.4%
Identity: 15%
PDB header:rna binding protein
Chain: A: PDB Molecule:kh-type splicing regulatory protein;
PDBTitle: solution structure of the third kh domain of ksrp

Phyre2

PDB 1y4c chain A

3D model

Region: 290 - 380
Aligned: 91
Modelled: 91
Confidence: 88.4%
Identity: 13%
PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp

Phyre2
1
c1tuaA_
2
d1tuaa2
3
c2e3uA_
4
d1tuaa1
5
c2yqrA_
6
c3krmB_
7
c2jzxA_
8
d1k1ga_
9
d1x4na1
10
c1j4wA_
11
c2jvzA_
12
c4jvhA_
13
c2hh2A_
14
c4b8tA_
15
d2ctka1
16
d1khma_
17
c3n89B_
18
d1we8a_
19
d2ba0a3
20
c2hh3A_
21
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25
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c1y4cA_
49
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1tuaA_
99.9 19 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein ape0754;
PDBTitle: 1.5 a crystal structure of a protein of unknown function2 ape0754 from aeropyrum pernix
2d1tuaa2
99.8 23 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
3c2e3uA_
99.6 28 PDB header:rna binding protein
Chain: A: PDB Molecule:hypothetical protein ph1566;
PDBTitle: crystal structure analysis of dim2p from pyrococcus horikoshii ot3
4d1tuaa1
98.3 16 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
5c2yqrA_
98.0 22 PDB header:rna binding protein
Chain: A: PDB Molecule:kiaa0907 protein;
PDBTitle: solution structure of the kh domain in kiaa0907 protein
6c3krmB_
97.9 17 PDB header:rna binding protein
Chain: B: PDB Molecule:insulin-like growth factor 2 mrna-binding protein
PDBTitle: imp1 kh34
7c2jzxA_
97.8 16 PDB header:rna binding protein
Chain: A: PDB Molecule:poly(rc)-binding protein 2;
PDBTitle: pcbp2 kh1-kh2 domains
8d1k1ga_
97.7 25 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
9d1x4na1
97.7 9 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
10c1j4wA_
97.6 15 PDB header:transcription/dna
Chain: A: PDB Molecule:fuse binding protein;
PDBTitle: complex of the kh3 and kh4 domains of fbp with a2 single_stranded 29mer dna oligonucleotide from the fuse3 element of the c-myc oncogene
11c2jvzA_
97.5 12 PDB header:splicing
Chain: A: PDB Molecule:far upstream element-binding protein 2;
PDBTitle: solution nmr structure of the second and third kh domains2 of ksrp
12c4jvhA_
97.5 32 PDB header:rna binding protein
Chain: A: PDB Molecule:protein quaking;
PDBTitle: structure of the star domain of quaking protein in complex with rna
13c2hh2A_
97.5 20 PDB header:rna binding protein
Chain: A: PDB Molecule:kh-type splicing regulatory protein;
PDBTitle: solution structure of the fourth kh domain of ksrp
14c4b8tA_
97.4 15 PDB header:transcription/rna
Chain: A: PDB Molecule:kh-type splicing regulatory protein;
PDBTitle: rna binding protein solution structure of the third kh2 domain of ksrp in complex with the g-rich target sequence.
15d2ctka1
97.4 17 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
16d1khma_
97.4 11 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
17c3n89B_
97.4 11 PDB header:cell cycle
Chain: B: PDB Molecule:defective in germ line development protein 3, isoform a;
PDBTitle: kh domains
18d1we8a_
97.4 16 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
19d2ba0a3
97.4 23 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
20c2hh3A_
97.4 15 PDB header:rna binding protein
Chain: A: PDB Molecule:kh-type splicing regulatory protein;
PDBTitle: solution structure of the third kh domain of ksrp
21d1j4wa1
not modelled 97.3 16 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
22d1x4ma1
not modelled 97.3 20 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
23d2bl5a1
not modelled 97.3 33 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
24d1ec6a_
not modelled 97.3 18 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
25d2z0sa2
not modelled 97.2 23 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
26d2axya1
not modelled 97.2 17 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
27d2ctma1
not modelled 97.2 18 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
28c1ztgD_
not modelled 97.1 16 PDB header:dna, rna binding protein/dna
Chain: D: PDB Molecule:poly(rc)-binding protein 1;
PDBTitle: human alpha polyc binding protein kh1
29d1j4wa2
not modelled 97.1 14 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
30d1zzka1
not modelled 97.1 12 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
31c4jvyA_
not modelled 97.1 30 PDB header:rna binding protein
Chain: A: PDB Molecule:female germline-specific tumor suppressor gld-1;
PDBTitle: structure of the star (signal transduction and activation of rna)2 domain of gld-1 bound to rna
32d1viga_
not modelled 97.0 18 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
33c2anrA_
not modelled 97.0 19 PDB header:rna-binding protein/rna
Chain: A: PDB Molecule:neuro-oncological ventral antigen 1;
PDBTitle: crystal structure (ii) of nova-1 kh1/kh2 domain tandem with 25nt rna2 hairpin
34d1dt4a_
not modelled 97.0 22 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
35d1dtja_
not modelled 97.0 18 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
36d2ctla1
not modelled 97.0 15 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
37d2ctea1
not modelled 97.0 28 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
38d1wvna1
not modelled 96.8 14 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
39c4am3A_
not modelled 96.7 13 PDB header:transferase/rna
Chain: A: PDB Molecule:polyribonucleotide nucleotidyltransferase;
PDBTitle: crystal structure of c. crescentus pnpase bound to rna
40d2ctja1
not modelled 96.5 24 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
41c4aimA_
not modelled 96.5 13 PDB header:transferase/peptide
Chain: A: PDB Molecule:polyribonucleotide nucleotidyltransferase;
PDBTitle: crystal structure of c. crescentus pnpase bound to rnase e2 recognition peptide
42c2qndA_
not modelled 96.5 14 PDB header:rna binding protein
Chain: A: PDB Molecule:fmr1 protein;
PDBTitle: crystal structure of the kh1-kh2 domains from human fragile x mental2 retardation protein
43c2dgrA_
not modelled 96.4 20 PDB header:rna binding protein
Chain: A: PDB Molecule:ring finger and kh domain-containing protein 1;
PDBTitle: solution structure of the second kh domain in ring finger2 and kh domain containing protein 1
44c3u1kB_
not modelled 96.2 27 PDB header:transferase
Chain: B: PDB Molecule:polyribonucleotide nucleotidyltransferase 1, mitochondrial;
PDBTitle: crystal structure of human pnpase
45d2ctfa1
not modelled 95.9 15 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
46c2cy1A_
not modelled 91.3 29 PDB header:transcription
Chain: A: PDB Molecule:nusa protein homolog;
PDBTitle: crystal structure of ape1850
47c3gkuB_
not modelled 90.4 19 PDB header:rna binding protein
Chain: B: PDB Molecule:probable rna-binding protein;
PDBTitle: crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940
48c1y4cA_
88.4 13 PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp
49d2je6i3
not modelled 83.9 43 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
50c2pt7G_
not modelled 79.0 41 PDB header:hydrolase/protein binding
Chain: G: PDB Molecule:hypothetical protein;
PDBTitle: crystal structure of cag virb11 (hp0525) and an inhibitory protein2 (hp1451)
51d1wf3a2
not modelled 63.4 33 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
52d2asba3
not modelled 63.2 19 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
53d1egaa2
not modelled 59.5 22 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
54d1hh2p3
not modelled 57.3 20 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
55d1fe0a_
not modelled 57.2 20 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
56c1egaB_
not modelled 49.1 22 PDB header:hydrolase
Chain: B: PDB Molecule:protein (gtp-binding protein era);
PDBTitle: crystal structure of a widely conserved gtpase era
57c3dxsX_
not modelled 49.1 23 PDB header:hydrolase
Chain: X: PDB Molecule:copper-transporting atpase ran1;
PDBTitle: crystal structure of a copper binding domain from hma7, a p-2 type atpase
58c1yjrA_
not modelled 47.7 15 PDB header:hydrolase
Chain: A: PDB Molecule:copper-transporting atpase 1;
PDBTitle: solution structure of the apo form of the sixth soluble2 domain a69p mutant of menkes protein
59c2rcyB_
not modelled 47.3 15 PDB header:oxidoreductase
Chain: B: PDB Molecule:pyrroline carboxylate reductase;
PDBTitle: crystal structure of plasmodium falciparum pyrroline carboxylate2 reductase (mal13p1.284) with nadp bound
60d2ahra1
not modelled 45.7 17 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:ProC C-terminal domain-like
61c2d7dA_
not modelled 45.2 10 PDB header:hydrolase/dna
Chain: A: PDB Molecule:uvrabc system protein b;
PDBTitle: structural insights into the cryptic dna dependent atp-ase2 activity of uvrb
62d1yqga1
not modelled 45.0 15 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like
Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like
Family:ProC C-terminal domain-like
63c3nmeA_
not modelled 44.5 17 PDB header:hydrolase
Chain: A: PDB Molecule:sex4 glucan phosphatase;
PDBTitle: structure of a plant phosphatase
64d1p6ta2
not modelled 43.0 21 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
65c2zv4O_
not modelled 42.8 13 PDB header:structural protein
Chain: O: PDB Molecule:major vault protein;
PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution
66c1wf3A_
not modelled 40.5 33 PDB header:hydrolase
Chain: A: PDB Molecule:gtp-binding protein;
PDBTitle: crystal structure of gtp-binding protein tt1341 from thermus2 thermophilus hb8
67c2ldiA_
not modelled 38.6 23 PDB header:hydrolase
Chain: A: PDB Molecule:zinc-transporting atpase;
PDBTitle: nmr solution structure of ziaan sub mutant
68d1q8la_
not modelled 37.3 7 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
69d1qh8b_
not modelled 37.0 7 Fold:Chelatase-like
Superfamily:"Helical backbone" metal receptor
Family:Nitrogenase iron-molybdenum protein
70d1ml4a2
not modelled 36.1 12 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
71d1mwza_
not modelled 35.1 18 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
72d1vlva2
not modelled 35.1 13 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
73c2yx0A_
not modelled 34.4 11 PDB header:metal binding protein
Chain: A: PDB Molecule:radical sam enzyme;
PDBTitle: crystal structure of p. horikoshii tyw1
74d1afia_
not modelled 34.4 17 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
75c3gvpB_
not modelled 34.1 23 PDB header:hydrolase
Chain: B: PDB Molecule:adenosylhomocysteinase 3;
PDBTitle: human sahh-like domain of human adenosylhomocysteinase 3
76c2kgsA_
not modelled 33.2 50 PDB header:membrane protein
Chain: A: PDB Molecule:uncharacterized protein rv0899/mt0922;
PDBTitle: solution structure of the amino-terminal domain of ompatb, a pore2 forming protein from mycobacterium tuberculosis
77c3ievA_
not modelled 33.1 37 PDB header:nucleotide binding protein/rna
Chain: A: PDB Molecule:gtp-binding protein era;
PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna
78d1s6ua_
not modelled 32.5 8 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
79c3v69A_
not modelled 31.9 19 PDB header:protein binding
Chain: A: PDB Molecule:protein filia;
PDBTitle: filia-n crystal structure
80d1qupa2
not modelled 31.5 16 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
81d1vh4a_
not modelled 31.1 22 Fold:Single-stranded right-handed beta-helix
Superfamily:Stabilizer of iron transporter SufD
Family:Stabilizer of iron transporter SufD
82c3fpjA_
not modelled 31.0 19 PDB header:biosynthetic protein, transferase
Chain: A: PDB Molecule:putative uncharacterized protein;
PDBTitle: crystal structure of e81q mutant of mtnas in complex with s-2 adenosylmethionine
83d2qlvb1
not modelled 30.9 33 Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:AMPK-beta glycogen binding domain-like
84d1pg5a2
not modelled 30.6 12 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
85d1twla_
not modelled 30.2 18 Fold:OB-fold
Superfamily:Inorganic pyrophosphatase
Family:Inorganic pyrophosphatase
86c2g7zB_
not modelled 28.9 13 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:conserved hypothetical protein spy1493;
PDBTitle: conserved degv-like protein of unknown function from streptococcus2 pyogenes m1 gas binds long-chain fatty acids
87c2l3mA_
not modelled 28.7 18 PDB header:metal binding protein
Chain: A: PDB Molecule:copper-ion-binding protein;
PDBTitle: solution structure of the putative copper-ion-binding protein from2 bacillus anthracis str. ames
88d1kvja_
not modelled 28.6 15 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
89c3canA_
not modelled 28.4 12 PDB header:lyase activator
Chain: A: PDB Molecule:pyruvate-formate lyase-activating enzyme;
PDBTitle: crystal structure of a domain of pyruvate-formate lyase-activating2 enzyme from bacteroides vulgatus atcc 8482
90d1va0a1
not modelled 28.0 37 Fold:Tetrapyrrole methylase
Superfamily:Tetrapyrrole methylase
Family:Tetrapyrrole methylase
91d1p6ta1
not modelled 27.1 17 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
92c2ofgX_
not modelled 26.9 20 PDB header:hydrolase, membrane protein
Chain: X: PDB Molecule:zinc-transporting atpase;
PDBTitle: solution structure of the n-terminal domain of the zinc(ii) atpase2 ziaa in its apo form
93c2ycbA_
not modelled 26.8 23 PDB header:hydrolase
Chain: A: PDB Molecule:cleavage and polyadenylation specificity factor;
PDBTitle: structure of the archaeal beta-casp protein with n-terminal2 kh domains from methanothermobacter thermautotrophicus
94d1osda_
not modelled 26.7 18 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
95c2crlA_
not modelled 26.5 21 PDB header:chaperone
Chain: A: PDB Molecule:copper chaperone for superoxide dismutase;
PDBTitle: the apo form of hma domain of copper chaperone for2 superoxide dismutase
96d1ekxa2
not modelled 26.5 12 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
97c2qlvB_
not modelled 26.2 31 PDB header:transferase/protein binding
Chain: B: PDB Molecule:protein sip2;
PDBTitle: crystal structure of the heterotrimer core of the s.2 cerevisiae ampk homolog snf1
98d1udea_
not modelled 25.9 15 Fold:OB-fold
Superfamily:Inorganic pyrophosphatase
Family:Inorganic pyrophosphatase
99c2jmlA_
not modelled 25.9 13 PDB header:transcription
Chain: A: PDB Molecule:dna binding domain/transcriptional regulator;
PDBTitle: solution structure of the n-terminal domain of cara repressor
100c3n58D_
not modelled 25.4 21 PDB header:hydrolase
Chain: D: PDB Molecule:adenosylhomocysteinase;
PDBTitle: crystal structure of s-adenosyl-l-homocysteine hydrolase from brucella2 melitensis in ternary complex with nad and adenosine, orthorhombic3 form
101d2f15a1
not modelled 25.0 33 Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:AMPK-beta glycogen binding domain-like
102c3dhyC_
not modelled 24.7 16 PDB header:hydrolase
Chain: C: PDB Molecule:adenosylhomocysteinase;
PDBTitle: crystal structures of mycobacterium tuberculosis s-adenosyl-l-2 homocysteine hydrolase in ternary complex with substrate and3 inhibitors
103d2at2a2
not modelled 24.1 26 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
104c2k2pA_
not modelled 24.0 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein atu1203;
PDBTitle: solution nmr structure of protein atu1203 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att10, ontario center for structural proteomics target atc1183
105c3c1qA_
not modelled 23.8 8 PDB header:transport protein
Chain: A: PDB Molecule:general secretion pathway protein f;
PDBTitle: the three-dimensional structure of the cytoplasmic domains of epsf2 from the type 2 secretion system of vibrio cholerae
106d1pkpa2
not modelled 23.7 29 Fold:dsRBD-like
Superfamily:dsRNA-binding domain-like
Family:Ribosomal S5 protein, N-terminal domain
107c1k0rB_
not modelled 23.6 19 PDB header:transcription
Chain: B: PDB Molecule:nusa;
PDBTitle: crystal structure of mycobacterium tuberculosis nusa
108d1pvva2
not modelled 23.6 13 Fold:ATC-like
Superfamily:Aspartate/ornithine carbamoyltransferase
Family:Aspartate/ornithine carbamoyltransferase
109c2e0kA_
not modelled 23.4 44 PDB header:transferase
Chain: A: PDB Molecule:precorrin-2 c20-methyltransferase;
PDBTitle: crystal structure of cbil, a methyltransferase involved in anaerobic2 vitamin b12 biosynthesis
110d2aw0a_
not modelled 23.1 18 Fold:Ferredoxin-like
Superfamily:HMA, heavy metal-associated domain
Family:HMA, heavy metal-associated domain
111c3ld3A_
not modelled 23.0 7 PDB header:hydrolase
Chain: A: PDB Molecule:inorganic pyrophosphatase;
PDBTitle: crystal structure of inorganic phosphatase from anaplasma2 phagocytophilum at 1.75a resolution
112d1vr8a1
not modelled 22.7 27 Fold:TM1622-like
Superfamily:TM1622-like
Family:TM1622-like
113d2fmra_
not modelled 22.6 15 Fold:Eukaryotic type KH-domain (KH-domain type I)
Superfamily:Eukaryotic type KH-domain (KH-domain type I)
Family:Eukaryotic type KH-domain (KH-domain type I)
114c1ydnA_
not modelled 22.6 24 PDB header:lyase
Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase;
PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35.
115d1z0na1
not modelled 22.5 33 Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:AMPK-beta glycogen binding domain-like
116d1z0mb1
not modelled 22.4 33 Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:AMPK-beta glycogen binding domain-like
117c1d4fD_
not modelled 22.2 26 PDB header:hydrolase
Chain: D: PDB Molecule:s-adenosylhomocysteine hydrolase;
PDBTitle: crystal structure of recombinant rat-liver d244e mutant s-2 adenosylhomocysteine hydrolase
118d2prda_
not modelled 22.1 21 Fold:OB-fold
Superfamily:Inorganic pyrophosphatase
Family:Inorganic pyrophosphatase
119c2kkhA_
not modelled 21.9 12 PDB header:metal transport
Chain: A: PDB Molecule:putative heavy metal transporter;
PDBTitle: structure of the zinc binding domain of the atpase hma4
120d1ve2a1
not modelled 21.7 37 Fold:Tetrapyrrole methylase
Superfamily:Tetrapyrrole methylase
Family:Tetrapyrrole methylase

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