Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ5SQX6
DateWed Jul 10 14:11:20 BST 2013
Unique Job ID1965ac2a29e64fe2
SequenceMTTHVTLEDA ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:100.811 Y:122.446 Z:161.750
Model (left) based on template c3p8cA_
Top template information
PDB header:protein binding
Chain: A: PDB Molecule:cytoplasmic fmr1-interacting protein 1;
PDBTitle: structure and control of the actin regulatory wave complex
Confidence and coverage
Confidence:100.0% Coverage: 94%
1175 residues ( 94% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
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   .........70.........80.........90.........100.........110.........120
Sequence  EQATVHSSMNEMLEEGHDYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
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   .........130.........140.........150.........160.........170.........180
Sequence  KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
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   .........190.........200.........210.........220.........230.........240
Sequence  VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
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   .........250.........260.........270.........280.........290.........300
Sequence  IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
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   .........310.........320.........330.........340.........350.........360
Sequence  QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
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   .........370.........380.........390.........400.........410.........420
Sequence  SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
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   .........430.........440.........450.........460.........470.........480
Sequence  KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
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   .........490.........500.........510.........520.........530.........540
Sequence  AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
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   .........550.........560.........570.........580.........590.........600
Sequence  GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF
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   .........610.........620.........630.........640.........650.........660
Sequence  FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
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   .........670.........680.........690.........700.........710.........720
Sequence  EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
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   .........730.........740.........750.........760.........770.........780
Sequence  LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
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   .........790.........800.........810.........820.........830.........840
Sequence  QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
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   .........850.........860.........870.........880.........890.........900
Sequence  HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
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   .........910.........920.........930.........940.........950.........960
Sequence  YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
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   .........970.........980.........990.........1000.........1010.........1020
Sequence  LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
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   .........1030.........1040.........1050.........1060.........1070.........1080
Sequence  LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
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   .........1090.........1100.........1110.........1120.........1130.........1140
Sequence  TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
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   .........1150.........1160.........1170.........1180.........1190.........1200
Sequence  VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
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   .........1210.........1220.........1230.........1240.........1250...
Sequence  KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
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Confidence Key
High(9)                    Low (0)
?Disordered ( 23%)
Alpha helix ( 69%)
Beta strand ( 0%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3p8c chain A

3D model

Region: 5 - 1249
Aligned: 1175
Modelled: 1211
Confidence: 100.0%
Identity: 89%
PDB header:protein binding
Chain: A: PDB Molecule:cytoplasmic fmr1-interacting protein 1;
PDBTitle: structure and control of the actin regulatory wave complex

Phyre2

PDB 3p8c chain B

3D model

Region: 64 - 1116
Aligned: 872
Modelled: 948
Confidence: 94.1%
Identity: 15%
PDB header:protein binding
Chain: B: PDB Molecule:nck-associated protein 1;
PDBTitle: structure and control of the actin regulatory wave complex

Phyre2

PDB 1ug8 chain A

3D model

Region: 1091 - 1128
Aligned: 31
Modelled: 38
Confidence: 49.6%
Identity: 23%
Fold: IF3-like
Superfamily: R3H domain
Family: R3H domain

Phyre2

PDB 1ayi chain A

3D model

Region: 647 - 683
Aligned: 37
Modelled: 37
Confidence: 48.0%
Identity: 27%
Fold: Acyl carrier protein-like
Superfamily: Colicin E immunity proteins
Family: Colicin E immunity proteins

Phyre2

PDB 2vlq chain A domain 1

3D model

Region: 647 - 683
Aligned: 37
Modelled: 37
Confidence: 46.7%
Identity: 30%
Fold: Acyl carrier protein-like
Superfamily: Colicin E immunity proteins
Family: Colicin E immunity proteins

Phyre2

PDB 2no8 chain A

3D model

Region: 647 - 683
Aligned: 37
Modelled: 37
Confidence: 45.0%
Identity: 24%
PDB header:immune system
Chain: A: PDB Molecule:colicin-e2 immunity protein;
PDBTitle: nmr structure analysis of the colicin immuntiy protein im2

Phyre2

PDB 1i5p chain A

3D model

Region: 908 - 1004
Aligned: 88
Modelled: 97
Confidence: 43.9%
Identity: 10%
PDB header:toxin
Chain: A: PDB Molecule:pesticidial crystal protein cry2aa;
PDBTitle: insecticidal crystal protein cry2aa

Phyre2

PDB 1gxh chain A

3D model

Region: 647 - 683
Aligned: 37
Modelled: 37
Confidence: 42.9%
Identity: 22%
Fold: Acyl carrier protein-like
Superfamily: Colicin E immunity proteins
Family: Colicin E immunity proteins

Phyre2

PDB 2c9k chain A

3D model

Region: 895 - 1007
Aligned: 104
Modelled: 113
Confidence: 39.4%
Identity: 14%
PDB header:toxin
Chain: A: PDB Molecule:pesticidal crystal protein cry4aa;
PDBTitle: structure of the functional form of the mosquito-larvicidal2 cry4aa toxin from bacillus thuringiensis at 2.8 a3 resolution

Phyre2

PDB 1g5m chain A

3D model

Region: 1148 - 1167
Aligned: 18
Modelled: 20
Confidence: 28.2%
Identity: 44%
Fold: Toxins' membrane translocation domains
Superfamily: Bcl-2 inhibitors of programmed cell death
Family: Bcl-2 inhibitors of programmed cell death

Phyre2

PDB 2iv1 chain J

3D model

Region: 1148 - 1157
Aligned: 10
Modelled: 10
Confidence: 26.8%
Identity: 40%
PDB header:lyase
Chain: J: PDB Molecule:cyanate hydratase;
PDBTitle: site directed mutagenesis of key residues involved in the2 catalytic mechanism of cyanase

Phyre2

PDB 1gs0 chain B

3D model

Region: 1107 - 1162
Aligned: 42
Modelled: 56
Confidence: 24.0%
Identity: 21%
PDB header:transferase
Chain: B: PDB Molecule:poly (adp-ribose) polymerase-2;
PDBTitle: crystal structure of the catalytic fragment of murine poly2 (adp-ribose) polymerase-2

Phyre2

PDB 1dwk chain A domain 2

3D model

Region: 1148 - 1157
Aligned: 10
Modelled: 10
Confidence: 22.9%
Identity: 40%
Fold: Cyanase C-terminal domain
Superfamily: Cyanase C-terminal domain
Family: Cyanase C-terminal domain

Phyre2

PDB 3mhk chain A

3D model

Region: 1090 - 1159
Aligned: 51
Modelled: 55
Confidence: 22.0%
Identity: 22%
PDB header:transferase
Chain: A: PDB Molecule:tankyrase-2;
PDBTitle: human tankyrase 2 - catalytic parp domain in complex with 2-(2-2 pyridyl)-7,8-dihydro-5h-thiino[4,3-d]pyrimidin-4-ol

Phyre2

PDB 2wuk chain D

3D model

Region: 427 - 455
Aligned: 28
Modelled: 29
Confidence: 21.1%
Identity: 18%
PDB header:cell cycle
Chain: D: PDB Molecule:septum site-determining protein diviva;
PDBTitle: diviva n-terminal domain, f17a mutant

Phyre2

PDB 2ca5 chain A domain 1

3D model

Region: 948 - 1003
Aligned: 56
Modelled: 56
Confidence: 20.1%
Identity: 16%
Fold: Long alpha-hairpin
Superfamily: MxiH-like
Family: MxiH-like

Phyre2

PDB 1o7x chain A

3D model

Region: 395 - 426
Aligned: 32
Modelled: 32
Confidence: 19.9%
Identity: 28%
Fold: Citrate synthase
Superfamily: Citrate synthase
Family: Citrate synthase

Phyre2

PDB 1nig chain A

3D model

Region: 126 - 170
Aligned: 45
Modelled: 45
Confidence: 19.7%
Identity: 22%
Fold: Ferritin-like
Superfamily: Cobalamin adenosyltransferase-like
Family: Hypothetical protein Ta1238

Phyre2

PDB 2pax chain A

3D model

Region: 1107 - 1159
Aligned: 39
Modelled: 53
Confidence: 19.6%
Identity: 23%
PDB header:transferase
Chain: A: PDB Molecule:poly(adp-ribose) polymerase;
PDBTitle: the catalytic fragment of poly(adp-ribose) polymerase2 complexed with 4-amino-1,8-naphthalimide

Phyre2

PDB 1m6e chain X

3D model

Region: 788 - 838
Aligned: 51
Modelled: 51
Confidence: 19.4%
Identity: 22%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: Salicylic acid carboxyl methyltransferase (SAMT)

Phyre2
1

c3p8cA_
2

c3p8cB_
3

d1ug8a_
4

d1ayia_
5

d2vlqa1
6

c2no8A_
7

c1i5pA_
8

d1gxha_
9

c2c9kA_
10

d1g5ma_
11

c2iv1J_
12

c1gs0B_
13

d1dwka2
14

c3mhkA_
15

c2wukD_
16

d2ca5a1
17

d1o7xa_
18

d1niga_
19

c2paxA_
20

d1m6ex_
21



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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3p8cA_



100.0 89 PDB header:protein binding
Chain: A: PDB Molecule:cytoplasmic fmr1-interacting protein 1;
PDBTitle: structure and control of the actin regulatory wave complex
2c3p8cB_



94.1 15 PDB header:protein binding
Chain: B: PDB Molecule:nck-associated protein 1;
PDBTitle: structure and control of the actin regulatory wave complex
3d1ug8a_



49.6 23 Fold:IF3-like
Superfamily:R3H domain
Family:R3H domain
4d1ayia_



48.0 27 Fold:Acyl carrier protein-like
Superfamily:Colicin E immunity proteins
Family:Colicin E immunity proteins
5d2vlqa1



46.7 30 Fold:Acyl carrier protein-like
Superfamily:Colicin E immunity proteins
Family:Colicin E immunity proteins
6c2no8A_



45.0 24 PDB header:immune system
Chain: A: PDB Molecule:colicin-e2 immunity protein;
PDBTitle: nmr structure analysis of the colicin immuntiy protein im2
7c1i5pA_



43.9 10 PDB header:toxin
Chain: A: PDB Molecule:pesticidial crystal protein cry2aa;
PDBTitle: insecticidal crystal protein cry2aa
8d1gxha_



42.9 22 Fold:Acyl carrier protein-like
Superfamily:Colicin E immunity proteins
Family:Colicin E immunity proteins
9c2c9kA_



39.4 14 PDB header:toxin
Chain: A: PDB Molecule:pesticidal crystal protein cry4aa;
PDBTitle: structure of the functional form of the mosquito-larvicidal2 cry4aa toxin from bacillus thuringiensis at 2.8 a3 resolution
10d1g5ma_



28.2 44 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
11c2iv1J_



26.8 40 PDB header:lyase
Chain: J: PDB Molecule:cyanate hydratase;
PDBTitle: site directed mutagenesis of key residues involved in the2 catalytic mechanism of cyanase
12c1gs0B_



24.0 21 PDB header:transferase
Chain: B: PDB Molecule:poly (adp-ribose) polymerase-2;
PDBTitle: crystal structure of the catalytic fragment of murine poly2 (adp-ribose) polymerase-2
13d1dwka2



22.9 40 Fold:Cyanase C-terminal domain
Superfamily:Cyanase C-terminal domain
Family:Cyanase C-terminal domain
14c3mhkA_



22.0 22 PDB header:transferase
Chain: A: PDB Molecule:tankyrase-2;
PDBTitle: human tankyrase 2 - catalytic parp domain in complex with 2-(2-2 pyridyl)-7,8-dihydro-5h-thiino[4,3-d]pyrimidin-4-ol
15c2wukD_



21.1 18 PDB header:cell cycle
Chain: D: PDB Molecule:septum site-determining protein diviva;
PDBTitle: diviva n-terminal domain, f17a mutant
16d2ca5a1



20.1 16 Fold:Long alpha-hairpin
Superfamily:MxiH-like
Family:MxiH-like
17d1o7xa_



19.9 28 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
18d1niga_



19.7 22 Fold:Ferritin-like
Superfamily:Cobalamin adenosyltransferase-like
Family:Hypothetical protein Ta1238
19c2paxA_



19.6 23 PDB header:transferase
Chain: A: PDB Molecule:poly(adp-ribose) polymerase;
PDBTitle: the catalytic fragment of poly(adp-ribose) polymerase2 complexed with 4-amino-1,8-naphthalimide
20d1m6ex_



19.4 22 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Salicylic acid carboxyl methyltransferase (SAMT)
21c2ketA_



not modelled 18.0 50 PDB header:antibiotic
Chain: A: PDB Molecule:cathelicidin-6;
PDBTitle: solution structure of bmap-27
22d1q59a_



not modelled 17.9 10 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
23c4dqyF_



not modelled 17.8 26 PDB header:transferase/dna
Chain: F: PDB Molecule:poly [adp-ribose] polymerase 1;
PDBTitle: structure of human parp-1 bound to a dna double strand break
24d1i5pa3



not modelled 17.6 11 Fold:Toxins' membrane translocation domains
Superfamily:delta-Endotoxin (insectocide), N-terminal domain
Family:delta-Endotoxin (insectocide), N-terminal domain
25c2i3sF_



not modelled 17.2 50 PDB header:cell cycle
Chain: F: PDB Molecule:checkpoint serine/threonine-protein kinase;
PDBTitle: bub3 complex with bub1 glebs motif
26c2i68B_



not modelled 15.8 31 PDB header:transport protein
Chain: B: PDB Molecule:protein emre;
PDBTitle: cryo-em based theoretical model structure of transmembrane2 domain of the multidrug-resistance antiporter from e. coli3 emre
27c4hl5A_



not modelled 14.5 26 PDB header:transferase
Chain: A: PDB Molecule:tankyrase-2;
PDBTitle: complex structure of human tankyrase 2 with 7-hydroxy -4'-2 methoxyflavone
28c1dlcA_



not modelled 14.5 11 PDB header:toxin
Chain: A: PDB Molecule:delta-endotoxin cryiiia;
PDBTitle: crystal structure of insecticidal delta-endotoxin from2 bacillus thuringiensis at 2.5 angstroms resolution
29c2p7nA_



not modelled 14.3 13 PDB header:cell invasion
Chain: A: PDB Molecule:pathogenicity island 1 effector protein;
PDBTitle: crystal structure of the pathogenicity island 1 effector2 protein from chromobacterium violaceum. northeast3 structural genomics consortium (nesgc) target cvr69.
30c3b5iB_



not modelled 13.4 10 PDB header:transferase
Chain: B: PDB Molecule:s-adenosyl-l-methionine:salicylic acid carboxyl
PDBTitle: crystal structure of indole-3-acetic acid methyltransferase
31c1rpqW_



not modelled 12.0 38 PDB header:membrane protein
Chain: W: PDB Molecule:peptide e131;
PDBTitle: high affinity ige receptor (alpha chain) complexed with tight-binding2 e131 'zeta' peptide from phage display
32d1zy3a1



not modelled 11.8 24 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
33d1alua_



not modelled 11.6 9 Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Long-chain cytokines
34c3c4hA_



not modelled 11.3 24 PDB header:transferase
Chain: A: PDB Molecule:poly(adp-ribose) polymerase 3;
PDBTitle: human poly(adp-ribose) polymerase 3, catalytic fragment in complex2 with an inhibitor dr2313
35d2rd6a2



not modelled 11.2 26 Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:Poly(ADP-ribose) polymerase, C-terminal domain
36c2lhuA_



not modelled 11.2 36 PDB header:structural protein
Chain: A: PDB Molecule:mybpc3 protein;
PDBTitle: structural insight into the unique cardiac myosin binding protein-c2 motif: a partially folded domain
37c2xa0A_



not modelled 10.7 33 PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis regulator bcl-2;
PDBTitle: crystal structure of bcl-2 in complex with a bax bh32 peptide
38c2lruA_



not modelled 10.2 29 PDB header:transferase
Chain: A: PDB Molecule:serine/threonine-protein kinase wnk1;
PDBTitle: solution structure of the wnk1 autoinhibitory domain
39c2vm6A_



not modelled 10.1 35 PDB header:immune system
Chain: A: PDB Molecule:bcl-2-related protein a1;
PDBTitle: human bcl2-a1 in complex with bim-bh3 peptide
40c1vgmB_



not modelled 10.0 28 PDB header:transferase
Chain: B: PDB Molecule:378aa long hypothetical citrate synthase;
PDBTitle: crystal structure of an isozyme of citrate synthase from sulfolbus2 tokodaii strain7
41d1bxla_



not modelled 9.6 29 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
42c2h12C_



not modelled 9.4 13 PDB header:transferase
Chain: C: PDB Molecule:citrate synthase;
PDBTitle: structure of acetobacter aceti citrate synthase complexed2 with oxaloacetate and carboxymethyldethia coenzyme a (cmx)
43d1jbob_



not modelled 9.4 29 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
44d1cpca_



not modelled 9.1 21 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
45c2o2fA_



not modelled 9.0 33 PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis regulator bcl-2;
PDBTitle: solution structure of the anti-apoptotic protein bcl-2 in2 complex with an acyl-sulfonamide-based ligand
46d1f99a_



not modelled 8.9 21 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
47c2r26C_



not modelled 8.9 28 PDB header:transferase
Chain: C: PDB Molecule:citrate synthase;
PDBTitle: the structure of the ternary complex of carboxymethyl2 coenzyme a and oxalateacetate with citrate synthase from3 the thermophilic archaeonthermoplasma acidophilum
48c3msuA_



not modelled 8.8 16 PDB header:transferase
Chain: A: PDB Molecule:citrate synthase;
PDBTitle: crystal structure of citrate synthase from francisella tularensis
49d1eyxb_



not modelled 8.8 18 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
50d1qzga_



not modelled 8.3 29 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
51c3pmdA_



not modelled 8.3 45 PDB header:lipid binding protein
Chain: A: PDB Molecule:conserved domain protein;
PDBTitle: crystal structure of the sporulation inhibitor pxo1-118 from bacillus2 anthracis
52d1kzyc2



not modelled 8.3 38 Fold:BRCT domain
Superfamily:BRCT domain
Family:53BP1
53c3ongA_



not modelled 8.2 14 PDB header:ligase
Chain: A: PDB Molecule:ubiquitin-activating enzyme e1-like;
PDBTitle: crystal structure of uba2ufd-ubc9: insights into e1-e2 interactions in2 sumo pathways
54c2dlrA_



not modelled 8.2 11 PDB header:signaling protein
Chain: A: PDB Molecule:regulator of g-protein signaling 10;
PDBTitle: solution structure of the rgs domain of human regulator of2 g-protein signaling 10
55d1ysga1



not modelled 8.1 29 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
56d1pq1a_



not modelled 7.9 29 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
57c2pfcA_



not modelled 7.8 46 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein rv0098/mt0107;
PDBTitle: structure of mycobacterium tuberculosis rv0098
58c2vtgA_



not modelled 7.8 14 PDB header:metal-binding protein
Chain: A: PDB Molecule:ionized calcium-binding adapter molecule 2;
PDBTitle: crystal structure of human iba2, trigonal crystal form
59d1miua1



not modelled 7.7 22 Fold:BRCA2 helical domain
Superfamily:BRCA2 helical domain
Family:BRCA2 helical domain
60c2dw3A_



not modelled 7.5 43 PDB header:photosynthesis
Chain: A: PDB Molecule:intrinsic membrane protein pufx;
PDBTitle: solution structure of the rhodobacter sphaeroides pufx2 membrane protein
61d1efya2



not modelled 7.5 23 Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:Poly(ADP-ribose) polymerase, C-terminal domain
62d1o0la_



not modelled 7.4 25 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
63d1dlca3



not modelled 7.4 11 Fold:Toxins' membrane translocation domains
Superfamily:delta-Endotoxin (insectocide), N-terminal domain
Family:delta-Endotoxin (insectocide), N-terminal domain
64c1rpqZ_



not modelled 7.1 38 PDB header:membrane protein
Chain: Z: PDB Molecule:peptide e131;
PDBTitle: high affinity ige receptor (alpha chain) complexed with tight-binding2 e131 'zeta' peptide from phage display
65d1jboa_



not modelled 6.9 19 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
66d1e5xa_



not modelled 6.8 17 Fold:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Superfamily:Tryptophan synthase beta subunit-like PLP-dependent enzymes
Family:Tryptophan synthase beta subunit-like PLP-dependent enzymes
67d1k3pa_



not modelled 6.8 22 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
68c2rf5A_



not modelled 6.8 24 PDB header:transferase
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of human tankyrase 1- catalytic parp domain
69c2y9zB_



not modelled 6.8 19 PDB header:transcription
Chain: B: PDB Molecule:iswi one complex protein 3;
PDBTitle: chromatin remodeling factor isw1a(del_atpase) in dna complex
70c3thzA_



not modelled 6.8 25 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:dna mismatch repair protein msh2;
PDBTitle: human mutsbeta complexed with an idl of 6 bases (loop6) and adp
71d1jc2a_



not modelled 6.5 20 Fold:EF Hand-like
Superfamily:EF-hand
Family:Calmodulin-like
72c1jc2A_



not modelled 6.5 20 PDB header:structural protein
Chain: A: PDB Molecule:troponin c, skeletal muscle;
PDBTitle: complex of the c-domain of troponin c with residues 1-40 of2 troponin i
73d1g73a_



not modelled 6.5 14 Fold:Spectrin repeat-like
Superfamily:Smac/diablo
Family:Smac/diablo
74c3oqhB_



not modelled 6.5 20 PDB header:ligase
Chain: B: PDB Molecule:putative uncharacterized protein yvmc;
PDBTitle: crystal structure of b. licheniformis cdps yvmc-blic
75c1kcoA_



not modelled 6.4 38 PDB header:protein binding
Chain: A: PDB Molecule:e131 zeta peptide;
PDBTitle: structure of e131 zeta peptide, a potent antagonist of the2 high-affinity ige receptor
76d1jlia_



not modelled 6.4 18 Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Short-chain cytokines
77c4aj5B_



not modelled 6.4 13 PDB header:cell cycle
Chain: B: PDB Molecule:spindle and kinetochore-associated protein 1;
PDBTitle: crystal structure of the ska core complex
78c4d8mA_



not modelled 6.4 16 PDB header:lipid binding protein
Chain: A: PDB Molecule:pesticidal crystal protein cry5ba;
PDBTitle: crystal structure of bacillus thuringiensis cry5b nematocidal toxin
79c2zbkA_



not modelled 6.3 13 PDB header:isomerase
Chain: A: PDB Molecule:type ii dna topoisomerase vi subunit a;
PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms
80c1ji6A_



not modelled 6.3 11 PDB header:toxin
Chain: A: PDB Molecule:pesticidial crystal protein cry3bb;
PDBTitle: crystal structure of the insecticidal bacterial del2 endotoxin cry3bb1 bacillus thuringiensis
81d2hkja2



not modelled 6.3 22 Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:DNA gyrase/MutL, second domain
82d1vp7a_



not modelled 6.3 22 Fold:Spectrin repeat-like
Superfamily:XseB-like
Family:XseB-like
83c2lsyA_



not modelled 6.2 24 PDB header:protein binding
Chain: A: PDB Molecule:dna repair protein rev1;
PDBTitle: structure of the c-terminal domain from human rev1
84c1iyjB_



not modelled 6.2 23 PDB header:gene regulation/antitumor protein
Chain: B: PDB Molecule:breast cancer susceptibility;
PDBTitle: structure of a brca2-dss1 complex
85c4exmB_



not modelled 6.1 23 PDB header:toxin, hydrolase
Chain: B: PDB Molecule:pesticin, lysozyme chimera;
PDBTitle: the crystal structure of an engineered phage lysin containing the2 binding domain of pesticin and the killing domain of t4-lysozyme
86d1gs0a2



not modelled 6.1 18 Fold:ADP-ribosylation
Superfamily:ADP-ribosylation
Family:Poly(ADP-ribose) polymerase, C-terminal domain
87c1wpaA_



not modelled 6.1 12 PDB header:cell adhesion
Chain: A: PDB Molecule:occludin;
PDBTitle: 1.5 angstrom crystal structure of human occludin fragment2 413-522
88c2jrzA_



not modelled 6.1 16 PDB header:oxidoreductase
Chain: A: PDB Molecule:histone demethylase jarid1c;
PDBTitle: solution structure of the bright/arid domain from the human2 jarid1c protein.
89d2ponb1



not modelled 6.0 29 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
90d1fewa_



not modelled 6.0 14 Fold:Spectrin repeat-like
Superfamily:Smac/diablo
Family:Smac/diablo
91d1vp7b_



not modelled 6.0 22 Fold:Spectrin repeat-like
Superfamily:XseB-like
Family:XseB-like
92c4i5nE_



not modelled 5.9 14 PDB header:hydrolase/toxin
Chain: E: PDB Molecule:serine/threonine-protein phosphatase 2a regulatory subunit
PDBTitle: structural mechanism of trimeric pp2a holoenzyme involving pr70:2 insight for cdc6 dephosphorylation
93c1rpqX_



not modelled 5.9 38 PDB header:membrane protein
Chain: X: PDB Molecule:peptide e131;
PDBTitle: high affinity ige receptor (alpha chain) complexed with tight-binding2 e131 'zeta' peptide from phage display
94d1alla_



not modelled 5.8 22 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
95d1t1va_



not modelled 5.8 10 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:SH3BGR (SH3-binding, glutamic acid-rich protein-like)
96c2lsjA_



not modelled 5.7 24 PDB header:protein binding/protein binding
Chain: A: PDB Molecule:dna repair protein rev1;
PDBTitle: solution structure of the mouse rev1 ctd in complex with the rev1-2 interacting region (rir)of pol kappa
97c1ykuB_



not modelled 5.7 36 PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein pxo2-61;
PDBTitle: crystal structure of a sensor domain homolog
98c3eb7B_



not modelled 5.6 14 PDB header:toxin
Chain: B: PDB Molecule:insecticidal delta-endotoxin cry8ea1;
PDBTitle: crystal structure of insecticidal delta-endotoxin cry8ea1 from2 bacillus thuringiensis at 2.2 angstroms resolution
99d1ioma_



not modelled 5.6 19 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase

Binding site prediction 

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