Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA2A6A1
DateWed Jul 10 14:20:06 BST 2013
Unique Job ID857d1118a9a8f123
SequenceMADRFSRFNE ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:37.291 Y:30.520 Z:22.179
Model (left) based on template d1zr9a1
Top template information
Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
Confidence and coverage
Confidence: 97.8% Coverage: 3%
39 residues ( 3% of your sequence) have been modelled with 97.8% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
101 residues ( 7%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
Warning: 88% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MADRFSRFNEDRDFQGNHFDQYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLG
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   .........70.........80.........90.........100.........110.........120
Sequence  KSLQGRTDPIPIVVKYDVMGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQKYKDYVD
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   .........130.........140.........150.........160.........170.........180
Sequence  KEKAIAKALEDLRANFYCELCDKQYQKHQEFDNHINSYDHAHKQRLKDLKQREFARNVSS
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   .........190.........200.........210.........220.........230.........240
Sequence  RSRKDEKKQEKALRRLHELAEQRKQAECAPGSGPMFRPTTVAVDEDGGEEDKDESSTNSG
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   .........250.........260.........270.........280.........290.........300
Sequence  ASAVSSCGFGADFSTDKGGSFTSVQITNTTGLSQAPGLASQGISFGIKNNLGPPLQKLGV
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   .........310.........320.........330.........340.........350.........360
Sequence  SFSFAKKAPVKLESIASVFKDHAEEGSSEDGTKADEKSSDQGVQKVGDTDGTGNLDGKKE
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   .........370.........380.........390.........400.........410.........420
Sequence  DEDPQDGGSLASTLSKLKRMKREEGTGATEPEYYHYIPPAHCKVKPNFPFLLFMRASEQM
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   .........430.........440.........450.........460.........470.........480
Sequence  EGDHSAHSKSAPENRKSSSPKPQGCSKTAASPGAERTVSEASELQKEAAVAGPSEPGGKT
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   .........490.........500.........510.........520.........530.........540
Sequence  ETKKGSGGGEDEQSVESRETSESPMCESNPKDISQATPATKAGQGPKHPTGPFFPVLSKD
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   .........550.........560.........570.........580.........590.........600
Sequence  ESTALQWPSELLIFTKAEPSISYSCNPLYFDFKLSRNKDAKAKGTEKPKDVAGSSKDHLQ
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   .........610.........620.........630.........640.........650.........660
Sequence  SLDPREPNKSQEEEQDVVLSSEGRVDEPASGAACSSLNKQEPGGSHMSETEDTGRSHPSK
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   .........670.........680.........690.........700.........710.........720
Sequence  KEPSGKSHRHKKKKKHKKSSKHKRKHKADTEEKSSKAESGEKSKKRKKRKRKKNKSSAAA
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   .........730.........740.........750.........760.........770.........780
Sequence  DSERGPKSEPPGSGSPAPPRRRRRAQDDSQRRSLPAEEGNSGKKDDGGGGSSCQDHSGRK
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   .........790.........800.........810.........820.........830.........840
Sequence  HKGEPPTSSCQRRANTKHSSRSSHRSQPSSGDEDSDDASSHRLHQKSPSQYSEEEEEEEE
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   .........850.........860.........870.........880.........890.........900
Sequence  EEEEEDEDSGSEHSRSRSRSGHRHSSHRSSRRSYSSSSDASSDQSCYSRQHSYSDDSYSD
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   .........910.........920.........930.........940.........950.........960
Sequence  YSDRSRRHSKRSHDSDDSDYTSSKHRSKRHKYSSSDDDYSLSCSQSRSRSRSHTRERSRS
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   .........970.........980.........990.........1000.........1010.........1020
Sequence  RGRSRSSSCSRSRSKRRSRSTTAHSWQRSRSYSRDRSRSTRSPSQRSGSRKGSWGHESPE
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   .........1030.........1040.........1050.........1060.........1070.........1080
Sequence  ERRSGRRDFIRSKIYRSQSPHYFQSGRGEGPGKKEDGRGDDSKGAGLPSQNSNTGTGRGS
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   .........1090.........1100.........1110.........1120.........1130.........1140
Sequence  ESDCSPEDKNSVTARLLLEKIQSRKVERKPNVCEEVLATPNKAGLKYKNPPQGYFGPKLP
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   .........1150.........1160.........1170.........1180.........1190.........1200
Sequence  PSLGNKPVLPMIGKLPATRKSNKKCEESGLERGEEQEHSEPEEGSPRSSDAPFGHQFSEE
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   .........1210.........1220.........1230.........1240.........1250.........1260
Sequence  AAGPLSDPPPEEPKSEEATADHSVAPLGTPAHTDCYPGDPAISHNYLPDPSDGDTLESLD
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   .........1270.........1280.........1290.........1300.........1310.........1320
Sequence  SGSQPGPVESSLLPIAPDLEHFPNYAPPSGEPSIESTDGTEDASLAPLESQPITFTPEEM
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   .........1330.........1340.........1350.........1360.........1370.........1380
Sequence  EKYSKLQQAAQQHIQQQLLAKQVKAFPASTALAPATPALQPIHIQQPATASATSITTVQH
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   .........1390.........1400.........1410.........1420.........1430.........1440
Sequence  AILQHHAAAAAAAIGIHPHPHPQPLAQVHHIPQPHLTPISLSHLTHSIIPGHPATFLASH
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   .........1450.........1460.........1470.........1480.........1490.........1500
Sequence  PIHIIPASAIHPGPFTFHPVPHAALYPTLLAPRPAAAAATALHLHPLLHPIFSGQDLQHP
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   .....
Sequence  PSHGT
Secondary structure 




SS confidence 




Disorder  ?????
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Confidence Key
High(9)                    Low (0)
?Disordered ( 88%)
Alpha helix ( 37%)
Beta strand ( 0%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1zr9 chain A domain 1

3D model

Region: 130 - 170
Aligned: 39
Modelled: 41
Confidence: 97.8%
Identity: 33%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: HkH motif-containing C2H2 finger

Phyre2

PDB 1zr9 chain A

3D model

Region: 130 - 170
Aligned: 39
Modelled: 41
Confidence: 97.8%
Identity: 33%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 593;
PDBTitle: solution structure of a human c2h2-type zinc finger protein

Phyre2

PDB 4dgw chain A

3D model

Region: 88 - 206
Aligned: 99
Modelled: 108
Confidence: 95.6%
Identity: 20%
PDB header:splicing
Chain: A: PDB Molecule:pre-mrna-splicing factor prp9;
PDBTitle: crystal structure of the sf3a splicing factor complex of u2 snrnp

Phyre2

PDB 1zu1 chain A

3D model

Region: 136 - 168
Aligned: 33
Modelled: 33
Confidence: 93.2%
Identity: 18%
PDB header:rna binding protein
Chain: A: PDB Molecule:rna binding protein zfa;
PDBTitle: solution structure of the n-terminal zinc fingers of the2 xenopus laevis double stranded rna binding protein zfa

Phyre2

PDB 4f9a chain B

3D model

Region: 137 - 177
Aligned: 27
Modelled: 41
Confidence: 89.7%
Identity: 41%
PDB header:transferase
Chain: B: PDB Molecule:protein dbf4 homolog a;
PDBTitle: human cdc7 kinase in complex with dbf4 and nucleotide

Phyre2

PDB 4lct chain D

3D model

Region: 89 - 144
Aligned: 54
Modelled: 56
Confidence: 88.7%
Identity: 20%
PDB header:signaling protein
Chain: D: PDB Molecule:cop9 signalosome complex subunit 1;
PDBTitle: crystal structure and versatile functional roles of the cop92 signalosome subunit 1

Phyre2

PDB 2elb chain A domain 1

3D model

Region: 93 - 219
Aligned: 127
Modelled: 127
Confidence: 86.3%
Identity: 18%
Fold: BAR/IMD domain-like
Superfamily: BAR/IMD domain-like
Family: BAR domain

Phyre2

PDB 1zu1 chain A domain 2

3D model

Region: 135 - 168
Aligned: 34
Modelled: 34
Confidence: 76.6%
Identity: 18%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: HkH motif-containing C2H2 finger

Phyre2

PDB 1l8d chain B

3D model

Region: 105 - 194
Aligned: 85
Modelled: 90
Confidence: 70.9%
Identity: 19%
PDB header:replication
Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase;
PDBTitle: rad50 coiled-coil zn hook

Phyre2

PDB 2rsi chain A

3D model

Region: 136 - 155
Aligned: 20
Modelled: 20
Confidence: 47.6%
Identity: 30%
PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein zfat;
PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat

Phyre2

PDB 1mr1 chain C

3D model

Region: 120 - 136
Aligned: 17
Modelled: 17
Confidence: 47.5%
Identity: 18%
Fold: SAND domain-like
Superfamily: SAND domain-like
Family: SMAD4-binding domain of oncoprotein Ski

Phyre2

PDB 4esj chain A

3D model

Region: 134 - 145
Aligned: 12
Modelled: 12
Confidence: 46.5%
Identity: 42%
PDB header:hydrolase/dna
Chain: A: PDB Molecule:type-2 restriction enzyme dpni;
PDBTitle: restriction endonuclease dpni in complex with target dna

Phyre2

PDB 1fu9 chain A

3D model

Region: 137 - 164
Aligned: 20
Modelled: 28
Confidence: 44.1%
Identity: 50%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: C2HC finger

Phyre2

PDB 2vrd chain A domain 1

3D model

Region: 136 - 143
Aligned: 8
Modelled: 8
Confidence: 43.9%
Identity: 63%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: HkH motif-containing C2H2 finger

Phyre2

PDB 2vgq chain A

3D model

Region: 109 - 198
Aligned: 77
Modelled: 90
Confidence: 43.6%
Identity: 13%
PDB header:immune system/transport
Chain: A: PDB Molecule:maltose-binding periplasmic protein,
PDBTitle: crystal structure of human ips-1 card

Phyre2

PDB 1m9m chain A

3D model

Region: 46 - 74
Aligned: 22
Modelled: 29
Confidence: 43.0%
Identity: 36%
Fold: Nitric oxide (NO) synthase oxygenase domain
Superfamily: Nitric oxide (NO) synthase oxygenase domain
Family: Nitric oxide (NO) synthase oxygenase domain

Phyre2

PDB 1q2o chain A

3D model

Region: 46 - 74
Aligned: 22
Modelled: 29
Confidence: 42.0%
Identity: 36%
Fold: Nitric oxide (NO) synthase oxygenase domain
Superfamily: Nitric oxide (NO) synthase oxygenase domain
Family: Nitric oxide (NO) synthase oxygenase domain

Phyre2

PDB 1qus chain A

3D model

Region: 46 - 76
Aligned: 31
Modelled: 31
Confidence: 41.5%
Identity: 23%
Fold: Lysozyme-like
Superfamily: Lysozyme-like
Family: Bacterial muramidase, catalytic domain

Phyre2

PDB 1loi chain A

3D model

Region: 135 - 143
Aligned: 9
Modelled: 9
Confidence: 41.2%
Identity: 56%
PDB header:hydrolase
Chain: A: PDB Molecule:cyclic 3',5'-amp specific phosphodiesterase rd1;
PDBTitle: n-terminal splice region of rat c-amp phosphodiesterase,2 nmr, 7 structures

Phyre2

PDB 1ztd chain A domain 1

3D model

Region: 124 - 142
Aligned: 19
Modelled: 19
Confidence: 41.0%
Identity: 32%
Fold: RNase III domain-like
Superfamily: RNase III domain-like
Family: PF0609-like

Phyre2
1

d1zr9a1
2

c1zr9A_
3

c4dgwA_
4

c1zu1A_
5

c4f9aB_
6

c4lctD_
7

d2elba1
8

d1zu1a2
9

c1l8dB_
10

c2rsiA_
11

d1mr1c_
12

c4esjA_
13

d1fu9a_
14

d2vrda1
15

c2vgqA_
16

d1m9ma_
17

d1q2oa_
18

d1qusa_
19

c1loiA_
20

d1ztda1
21



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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1zr9a1



97.8 33 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
2c1zr9A_



97.8 33 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 593;
PDBTitle: solution structure of a human c2h2-type zinc finger protein
3c4dgwA_



95.6 20 PDB header:splicing
Chain: A: PDB Molecule:pre-mrna-splicing factor prp9;
PDBTitle: crystal structure of the sf3a splicing factor complex of u2 snrnp
4c1zu1A_



93.2 18 PDB header:rna binding protein
Chain: A: PDB Molecule:rna binding protein zfa;
PDBTitle: solution structure of the n-terminal zinc fingers of the2 xenopus laevis double stranded rna binding protein zfa
5c4f9aB_



89.7 41 PDB header:transferase
Chain: B: PDB Molecule:protein dbf4 homolog a;
PDBTitle: human cdc7 kinase in complex with dbf4 and nucleotide
6c4lctD_



88.7 20 PDB header:signaling protein
Chain: D: PDB Molecule:cop9 signalosome complex subunit 1;
PDBTitle: crystal structure and versatile functional roles of the cop92 signalosome subunit 1
7d2elba1



86.3 18 Fold:BAR/IMD domain-like
Superfamily:BAR/IMD domain-like
Family:BAR domain
8d1zu1a2



76.6 18 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
9c1l8dB_



70.9 19 PDB header:replication
Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase;
PDBTitle: rad50 coiled-coil zn hook
10c2rsiA_



47.6 30 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein zfat;
PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat
11d1mr1c_



47.5 18 Fold:SAND domain-like
Superfamily:SAND domain-like
Family:SMAD4-binding domain of oncoprotein Ski
12c4esjA_



46.5 42 PDB header:hydrolase/dna
Chain: A: PDB Molecule:type-2 restriction enzyme dpni;
PDBTitle: restriction endonuclease dpni in complex with target dna
13d1fu9a_



44.1 50 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:C2HC finger
14d2vrda1



43.9 63 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
15c2vgqA_



43.6 13 PDB header:immune system/transport
Chain: A: PDB Molecule:maltose-binding periplasmic protein,
PDBTitle: crystal structure of human ips-1 card
16d1m9ma_



43.0 36 Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
17d1q2oa_



42.0 36 Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
18d1qusa_



41.5 23 Fold:Lysozyme-like
Superfamily:Lysozyme-like
Family:Bacterial muramidase, catalytic domain
19c1loiA_



41.2 56 PDB header:hydrolase
Chain: A: PDB Molecule:cyclic 3',5'-amp specific phosphodiesterase rd1;
PDBTitle: n-terminal splice region of rat c-amp phosphodiesterase,2 nmr, 7 structures
20d1ztda1



41.0 32 Fold:RNase III domain-like
Superfamily:RNase III domain-like
Family:PF0609-like
21c3eplA_



not modelled 40.5 22 PDB header:transferase/rna
Chain: A: PDB Molecule:trna isopentenyltransferase;
PDBTitle: crystallographic snapshots of eukaryotic2 dimethylallyltransferase acting on trna: insight into trna3 recognition and reaction mechanism
22c4anrA_



not modelled 40.2 27 PDB header:lyase
Chain: A: PDB Molecule:soluble lytic transglycosylase b;
PDBTitle: crystal structure of soluble lytic transglycosylase sltb12 from pseudomonas aeruginosa
23c3cw19_



not modelled 39.3 63 PDB header:splicing
Chain: 9: PDB Molecule:u1 small nuclear ribonucleoprotein c;
PDBTitle: crystal structure of human spliceosomal u1 snrnp
24d1qlma_



not modelled 39.2 38 Fold:Methenyltetrahydromethanopterin cyclohydrolase
Superfamily:Methenyltetrahydromethanopterin cyclohydrolase
Family:Methenyltetrahydromethanopterin cyclohydrolase
25d2atza1



not modelled 38.9 28 Fold:Prim-pol domain
Superfamily:Prim-pol domain
Family:HP0184-like
26d1nosa_



not modelled 38.8 43 Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
27c4fs9B_



not modelled 38.6 13 PDB header:isomerase
Chain: B: PDB Molecule:broad specificity amino acid racemase;
PDBTitle: complex structure of a broad specificity amino acid racemase (bar)2 within the reactive intermediate
28c1fooA_



not modelled 37.8 36 PDB header:oxidoreductase
Chain: A: PDB Molecule:nitric-oxide synthase;
PDBTitle: bovine endothelial nitric oxide synthase heme domain complexed with l-2 arg and no(h4b-free)
29c2dmiA_



not modelled 37.7 32 PDB header:transcription
Chain: A: PDB Molecule:teashirt homolog 3;
PDBTitle: solution structure of the first and the second zf-c2h2 like2 domains of human teashirt homolog 3
30c1un6D_



not modelled 37.5 10 PDB header:rna-binding protein/rna
Chain: D: PDB Molecule:transcription factor iiia;
PDBTitle: the crystal structure of a zinc finger - rna complex2 reveals two modes of molecular recognition
31d1mjta_



not modelled 36.5 43 Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
32c3o4xE_



not modelled 36.1 16 PDB header:protein binding
Chain: E: PDB Molecule:protein diaphanous homolog 1;
PDBTitle: crystal structure of complex between amino and carboxy terminal2 fragments of mdia1
33c3o4xF_



not modelled 36.1 16 PDB header:protein binding
Chain: F: PDB Molecule:protein diaphanous homolog 1;
PDBTitle: crystal structure of complex between amino and carboxy terminal2 fragments of mdia1
34d3e7ga1



not modelled 35.8 43 Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
35d1fnna1



not modelled 35.5 17 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Helicase DNA-binding domain
36c1l7eC_



not modelled 35.2 19 PDB header:oxidoreductase
Chain: C: PDB Molecule:nicotinamide nucleotide transhydrogenase,
PDBTitle: crystal structure of r. rubrum transhydrogenase domain i2 with bound nadh
37d2dara1



not modelled 35.0 38 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
38c2ctdA_



not modelled 34.9 26 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 512;
PDBTitle: solution structure of two zf-c2h2 domains from human zinc2 finger protein 512
39c4gvsA_



not modelled 34.7 30 PDB header:hydrolase
Chain: A: PDB Molecule:methenyltetrahydromethanopterin cyclohydrolase;
PDBTitle: x-ray structure of the archaeoglobus fulgidus methenyl-2 tetrahydromethanopterin cyclohydrolase in complex with n5-formyl-3 tetrahydromethanopterin
40c2gqjA_



not modelled 34.3 25 PDB header:gene regulation
Chain: A: PDB Molecule:zinc finger protein kiaa1196;
PDBTitle: solution structure of the two zf-c2h2 like domains(493-575)2 of human zinc finger protein kiaa1196
41d1om4a_



not modelled 34.3 32 Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
42c4ijdA_



not modelled 34.3 20 PDB header:transferase
Chain: A: PDB Molecule:histone-lysine n-methyltransferase prdm9;
PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 9
43d3e7ma1



not modelled 34.2 43 Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
44d1p7aa_



not modelled 33.9 25 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
45c2ct1A_



not modelled 33.8 19 PDB header:transcription
Chain: A: PDB Molecule:transcriptional repressor ctcf;
PDBTitle: solution structure of the zinc finger domain of2 transcriptional repressor ctcf protein
46c2ogfD_



not modelled 33.0 28 PDB header:structural genomics, unknown function
Chain: D: PDB Molecule:hypothetical protein mj0408;
PDBTitle: crystal structure of protein mj0408 from methanococcus jannaschii,2 pfam duf372
47c1bboA_



not modelled 32.9 30 PDB header:dna-binding protein
Chain: A: PDB Molecule:human enhancer-binding protein mbp-1;
PDBTitle: high-resolution solution structure of the double cys2*his22 zinc finger from the human enhancer binding protein mbp-1
48d3ebya1



not modelled 32.4 36 Fold:Cystatin-like
Superfamily:NTF2-like
Family:Ring hydroxylating beta subunit
49d1weva_



not modelled 32.1 33 Fold:FYVE/PHD zinc finger
Superfamily:FYVE/PHD zinc finger
Family:PHD domain
50d1h6ga2



not modelled 31.9 33 Fold:Four-helical up-and-down bundle
Superfamily:alpha-catenin/vinculin-like
Family:alpha-catenin/vinculin
51c2epqA_



not modelled 31.2 15 PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the third zinc finger domain of zinc2 finger protein 278
52c2elqA_



not modelled 31.0 25 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 14th c2h2 zinc finger of human2 zinc finger protein 406
53d2ieca1



not modelled 30.6 31 Fold:MK0786-like
Superfamily:MK0786-like
Family:MK0786-like
54d2a2na1



not modelled 30.5 25 Fold:Cyclophilin-like
Superfamily:Cyclophilin-like
Family:Cyclophilin (peptidylprolyl isomerase)
55c2rsjA_



not modelled 30.5 26 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein zfat;
PDBTitle: solution structures of the dna-binding domains of immune-related zinc-2 finger protein zfat
56c2zciD_



not modelled 30.5 17 PDB header:signaling protein, lyase
Chain: D: PDB Molecule:phosphoenolpyruvate carboxykinase [gtp];
PDBTitle: structure of a gtp-dependent bacterial pep-carboxykinase2 from corynebacterium glutamicum
57d1zs8a2



not modelled 30.3 9 Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
58c4gznC_



not modelled 30.3 25 PDB header:transcription/dna
Chain: C: PDB Molecule:zinc finger protein 57;
PDBTitle: mouse zfp57 zinc fingers in complex with methylated dna
59c2flqA_



not modelled 29.4 41 PDB header:oxidoreductase
Chain: A: PDB Molecule:nitric oxide synthase;
PDBTitle: crystal structure of nitric oxide synthase from geobacillus2 stearothermophilus (atcc 12980) complexed with l-arginine
60c2k7nA_



not modelled 29.4 29 PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase-like 1;
PDBTitle: solution structure of the ppil1 bound to a fragment of skip
61c2yt9A_



not modelled 29.3 25 PDB header:transcription
Chain: A: PDB Molecule:zinc finger-containing protein 1;
PDBTitle: solution structure of c2h2 type zinc finger domain 345 in2 zinc finger protein 278
62c3p0kA_



not modelled 29.2 46 PDB header:oxidoreductase, viral protein
Chain: A: PDB Molecule:sulfhydryl oxidase;
PDBTitle: structure of baculovirus sulfhydryl oxidase ac92
63c2ee8A_



not modelled 28.8 24 PDB header:gene regulation
Chain: A: PDB Molecule:protein odd-skipped-related 2;
PDBTitle: solution structure of three zf-c2h2 domains from mouse2 protein odd-skipped-related 2 splicing isoform 2
64c3iufA_



not modelled 28.5 40 PDB header:protein binding
Chain: A: PDB Molecule:zinc finger protein ubi-d4;
PDBTitle: crystal structure of the c2h2-type zinc finger domain of human ubi-d4
65c1x5wA_



not modelled 28.4 15 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1;
PDBTitle: solution structure of the c2h2 type zinc-binding domain of2 human zinc finger protein 64, isoforms 1 and 2
66c1wjpA_



not modelled 28.2 15 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 295;
PDBTitle: solution structure of zf-c2h2 domains from human zinc2 finger protein 295
67d1m7va_



not modelled 27.9 24 Fold:Nitric oxide (NO) synthase oxygenase domain
Superfamily:Nitric oxide (NO) synthase oxygenase domain
Family:Nitric oxide (NO) synthase oxygenase domain
68d2chca1



not modelled 27.8 17 Fold:Cystatin-like
Superfamily:NTF2-like
Family:Rv3472-like
69c3hizB_



not modelled 27.8 9 PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit
PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha
70c1f2iI_



not modelled 27.2 25 PDB header:transcription/dna
Chain: I: PDB Molecule:fusion of n-terminal 17-mer peptide extension to
PDBTitle: cocrystal structure of selected zinc finger dimer bound to2 dna
71c2qeyA_



not modelled 27.2 26 PDB header:lyase
Chain: A: PDB Molecule:phosphoenolpyruvate carboxykinase, cytosolic [gtp];
PDBTitle: rat cytosolic pepck in complex with gtp
72c2lv2A_



not modelled 26.8 15 PDB header:transcription
Chain: A: PDB Molecule:insulinoma-associated protein 1;
PDBTitle: solution nmr structure of c2h2-type zinc-fingers 4 and 5 from human2 insulinoma-associated protein 1 (fragment 424-497), northeast3 structural genomics consortium target hr7614b
73c3g6iA_



not modelled 26.2 31 PDB header:unknown function
Chain: A: PDB Molecule:putative outer membrane protein, part of carbohydrate
PDBTitle: crystal structure of an outer membrane protein, part of a putative2 carbohydrate binding complex (bt_1022) from bacteroides3 thetaiotaomicron vpi-5482 at 1.93 a resolution
74d1wbxa2



not modelled 25.4 20 Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
75c2lvuA_



not modelled 25.2 33 PDB header:transcription
Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 17;
PDBTitle: solution structure of miz-1 zinc finger 10
76d1vlga_



not modelled 25.1 23 Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
77c2elvA_



not modelled 25.0 22 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 6th c2h2 zinc finger of human2 zinc finger protein 406
78d2dmda2



not modelled 24.7 28 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
79c1tllA_



not modelled 24.6 19 PDB header:oxidoreductase
Chain: A: PDB Molecule:nitric-oxide synthase, brain;
PDBTitle: crystal structure of rat neuronal nitric-oxide synthase2 reductase module at 2.3 a resolution.
80c2eoxA_



not modelled 24.2 20 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 315-2 345) of human zinc finger protein 473
81c1arfA_



not modelled 24.2 25 PDB header:transcription regulation
Chain: A: PDB Molecule:yeast transcription factor adr1;
PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding
82d1hcia4



not modelled 24.1 17 Fold:Spectrin repeat-like
Superfamily:Spectrin repeat
Family:Spectrin repeat
83d1c16a2



not modelled 23.7 13 Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
84c3bo7D_



not modelled 23.6 25 PDB header:isomerase/immunosuppressant
Chain: D: PDB Molecule:peptidyl-prolyl cis-trans isomerase cyclophilin-type;
PDBTitle: crystal structure of toxoplasma gondii peptidyl-prolyl cis-trans2 isomerase, 541.m00136
85c3pe0B_



not modelled 23.4 25 PDB header:structural protein
Chain: B: PDB Molecule:plectin;
PDBTitle: structure of the central region of the plakin domain of plectin
86c3c85D_



not modelled 23.1 43 PDB header:transport protein
Chain: D: PDB Molecule:putative glutathione-regulated potassium-efflux system
PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus
87c1hx9A_



not modelled 23.0 18 PDB header:lyase
Chain: A: PDB Molecule:5-epi-aristolochene synthase;
PDBTitle: crystal structure of teas w273s form 1
88c2ig7A_



not modelled 22.3 21 PDB header:transferase
Chain: A: PDB Molecule:choline/ethanolamine kinase;
PDBTitle: crystal structure of human choline kinase b
89c3hl6B_



not modelled 21.9 25 PDB header:unknown function
Chain: B: PDB Molecule:pathogenicity island protein;
PDBTitle: staphylococcus aureus pathogenicity island 3 orf9 protein
90c2emcA_



not modelled 21.8 25 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 641-2 673) of human zinc finger protein 473
91c1j9zB_



not modelled 21.7 28 PDB header:oxidoreductase
Chain: B: PDB Molecule:nadph-cytochrome p450 reductase;
PDBTitle: cypor-w677g
92c2drpD_



not modelled 21.7 20 PDB header:transcription/dna
Chain: D: PDB Molecule:protein (tramtrack dna-binding domain);
PDBTitle: the crystal structure of a two zinc-finger peptide reveals2 an extension to the rules for zinc-finger/dna recognition
93d1oaoc_



not modelled 21.6 19 Fold:Prismane protein-like
Superfamily:Prismane protein-like
Family:Acetyl-CoA synthase
94c1ei3C_



not modelled 21.6 8 PDB header:blood clotting
Chain: C: PDB Molecule:fibrinogen;
PDBTitle: crystal structure of native chicken fibrinogen
95c3ve5D_



not modelled 21.5 23 PDB header:recombination
Chain: D: PDB Molecule:recombination protein recr;
PDBTitle: structure of recombination mediator protein recr16-196 deletion mutant
96c3lvgF_



not modelled 21.5 20 PDB header:structural protein
Chain: F: PDB Molecule:clathrin light chain b;
PDBTitle: crystal structure of a clathrin heavy chain and clathrin light chain2 complex
97c2lceA_



not modelled 21.4 20 PDB header:transcription regulator
Chain: A: PDB Molecule:b-cell lymphoma 6 protein;
PDBTitle: chemical shift assignment of hr4436b from homo sapiens, northeast2 structural genomics consortium
98c1llmC_



not modelled 21.3 10 PDB header:transcription/dna
Chain: C: PDB Molecule:chimera of zif23-gcn4;
PDBTitle: crystal structure of a zif23-gcn4 chimera bound to dna
99c2em5A_



not modelled 21.2 14 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 768-2 800) of human zinc finger protein 95 homolog
100d1fpsa_



not modelled 21.1 14 Fold:Terpenoid synthases
Superfamily:Terpenoid synthases
Family:Isoprenyl diphosphate synthases
101c2d9hA_



not modelled 21.1 20 PDB header:dna binding protein
Chain: A: PDB Molecule:zinc finger protein 692;
PDBTitle: solution structure of the forth and fifth zf-c2h2 domains2 of zinc finger protein 692
102d1zt1a2



not modelled 20.9 18 Fold:MHC antigen-recognition domain
Superfamily:MHC antigen-recognition domain
Family:MHC antigen-recognition domain
103c4euhA_



not modelled 20.9 24 PDB header:oxidoreductase
Chain: A: PDB Molecule:putative reductase ca_c0462;
PDBTitle: crystal structure of clostridium acetobutulicum trans-2-enoyl-coa2 reductase apo form
104c2rpcA_



not modelled 20.9 20 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: solution structure of the tandem zf-c2h2 domains from the2 human zinc finger protein zic 3
105c2j1dG_



not modelled 20.9 9 PDB header:protein binding
Chain: G: PDB Molecule:disheveled-associated activator of morphogenesis 1;
PDBTitle: crystallization of hdaam1 c-terminal fragment
106c1m46B_



not modelled 20.7 46 PDB header:cell cycle protein
Chain: B: PDB Molecule:iq4 motif from myo2p, a class v myosin;
PDBTitle: crystal structure of mlc1p bound to iq4 of myo2p, a class v2 myosin
107d2oeea1



not modelled 20.3 44 Fold:YheA-like
Superfamily:YheA/YmcA-like
Family:YheA-like
108c2z6eC_



not modelled 20.3 10 PDB header:protein fibril regulator
Chain: C: PDB Molecule:disheveled-associated activator of morphogenesis
PDBTitle: crystal structure of human daam1 fh2
109c2ghfA_



not modelled 20.2 26 PDB header:transcription, metal binding protein
Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 1;
PDBTitle: solution structure of the complete zinc-finger region of2 human zinc-fingers and homeoboxes 1 (zhx1)

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