Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA2A4P0
DateWed Jul 10 14:06:11 BST 2013
Unique Job IDdf13e67bc2946f07
SequenceMAVAVAAAGV ... Download FASTA

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:73.788 Y:82.848 Z:77.140
Model (left) based on template c3kx2A_
Top template information
PDB header:hydrolase
Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna
PDBTitle: crystal structure of prp43p in complex with adp
Confidence and coverage
Confidence:100.0% Coverage: 58%
716 residues ( 58% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MAVAVAAAGVLMGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
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   .........70.........80.........90.........100.........110.........120
Sequence  TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLRELFP
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   .........130.........140.........150.........160.........170.........180
Sequence  VLCQPDNPSARTMLDEEDVKVAVDVLKELEALMPSAAGQEKQRDPEHRDRTKKKKRSRSR
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   .........190.........200.........210.........220.........230.........240
Sequence  DRDRDRDRDRDRDRDRDRDRDKDRERDRDRERDRERDRERDHKRRHRSRSRSHSRTRERT
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   .........250.........260.........270.........280.........290.........300
Sequence  KGKSRYRSRSRSQSPFKDRKDREKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIM
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   .........310.........320.........330.........340.........350.........360
Sequence  QFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMK
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   .........370.........380.........390.........400.........410.........420
Sequence  DVDQETGEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISD
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???
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   .........430.........440.........450.........460.........470.........480
Sequence  PEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQS
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   .........490.........500.........510.........520.........530.........540
Sequence  MDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDA
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   .........550.........560.........570.........580.........590.........600
Sequence  EGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQ
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   .........610.........620.........630.........640.........650.........660
Sequence  AVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGC
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   .........670.........680.........690.........700.........710.........720
Sequence  CLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDV
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   .........730.........740.........750.........760.........770.........780
Sequence  LFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDY
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   .........790.........800.........810.........820.........830.........840
Sequence  LDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSAL
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   .........850.........860.........870.........880.........890.........900
Sequence  PSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVV
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   .........910.........920.........930.........940.........950.........960
Sequence  TPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMG
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   .........970.........980.........990.........1000.........1010.........1020
Sequence  INDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMS
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   .........1030.........1040.........1050.........1060.........1070.........1080
Sequence  VHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNK
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   .........1090.........1100.........1110.........1120.........1130.........1140
Sequence  FSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAA
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   .........1150.........1160.........1170.........1180.........1190.........1200
Sequence  KKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEF
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   .........1210.........1220.........1230.........1240....
Sequence  APAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
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Confidence Key
High(9)                    Low (0)
?Disordered ( 37%)
Alpha helix ( 46%)
Beta strand ( 10%)

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3kx2 chain A

3D model

Region: 510 - 1230
Aligned: 716
Modelled: 720
Confidence: 100.0%
Identity: 47%
PDB header:hydrolase
Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna
PDBTitle: crystal structure of prp43p in complex with adp

Phyre2

PDB 1cu1 chain B

3D model

Region: 603 - 1052
Aligned: 405
Modelled: 437
Confidence: 100.0%
Identity: 19%
PDB header:hydrolase
Chain: B: PDB Molecule:protein (protease/helicase ns3);
PDBTitle: crystal structure of an enzyme complex from hepatitis c2 virus

Phyre2

PDB 4b6e chain B

3D model

Region: 603 - 1017
Aligned: 367
Modelled: 415
Confidence: 100.0%
Identity: 21%
PDB header:hydrolase
Chain: B: PDB Molecule:non-structural protein 4a, serine protease ns3;
PDBTitle: discovery of an allosteric mechanism for the regulation of2 hcv ns3 protein function

Phyre2

PDB 3i4u chain A

3D model

Region: 974 - 1209
Aligned: 236
Modelled: 236
Confidence: 100.0%
Identity: 100%
PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dhx8;
PDBTitle: crystal structure analysis of a helicase associated domain

Phyre2

PDB 1a1v chain A

3D model

Region: 603 - 1068
Aligned: 416
Modelled: 466
Confidence: 100.0%
Identity: 18%
PDB header:hydrolase/dna
Chain: A: PDB Molecule:protein (ns3 protein);
PDBTitle: hepatitis c virus ns3 helicase domain complexed with single2 stranded sdna

Phyre2

PDB 2f55 chain C

3D model

Region: 602 - 1068
Aligned: 416
Modelled: 454
Confidence: 100.0%
Identity: 19%
PDB header:hydrolase/dna
Chain: C: PDB Molecule:polyprotein;
PDBTitle: two hepatitis c virus ns3 helicase domains complexed with2 the same strand of dna

Phyre2

PDB 2wv9 chain A

3D model

Region: 600 - 1020
Aligned: 361
Modelled: 393
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: A: PDB Molecule:flavivirin protease ns2b regulatory subunit, flavivirin
PDBTitle: crystal structure of the ns3 protease-helicase from murray2 valley encephalitis virus

Phyre2

PDB 2vbc chain A

3D model

Region: 602 - 1026
Aligned: 381
Modelled: 418
Confidence: 100.0%
Identity: 15%
PDB header:hydrolase
Chain: A: PDB Molecule:dengue 4 ns3 full-length protein;
PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus

Phyre2

PDB 1ymf chain A

3D model

Region: 600 - 1080
Aligned: 426
Modelled: 479
Confidence: 100.0%
Identity: 15%
PDB header:hydrolase
Chain: A: PDB Molecule:genome polyprotein [contains: flavivirin
PDBTitle: crystal structure of yellow fever virus ns3 helicase2 complexed with adp

Phyre2

PDB 2jlr chain A

3D model

Region: 600 - 1026
Aligned: 383
Modelled: 412
Confidence: 100.0%
Identity: 16%
PDB header:hydrolase
Chain: A: PDB Molecule:serine protease subunit ns3;
PDBTitle: dengue virus 4 ns3 helicase in complex with amppnp

Phyre2

PDB 3rc8 chain A

3D model

Region: 498 - 1106
Aligned: 537
Modelled: 579
Confidence: 100.0%
Identity: 18%
PDB header:hydrolase/rna
Chain: A: PDB Molecule:atp-dependent rna helicase supv3l1, mitochondrial;
PDBTitle: human mitochondrial helicase suv3 in complex with short rna fragment

Phyre2

PDB 2z83 chain A

3D model

Region: 600 - 1026
Aligned: 373
Modelled: 408
Confidence: 100.0%
Identity: 19%
PDB header:viral protein
Chain: A: PDB Molecule:helicase/nucleoside triphosphatase;
PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8

Phyre2

PDB 3llm chain B

3D model

Region: 532 - 761
Aligned: 228
Modelled: 230
Confidence: 100.0%
Identity: 31%
PDB header:hydrolase
Chain: B: PDB Molecule:atp-dependent rna helicase a;
PDBTitle: crystal structure analysis of a rna helicase

Phyre2

PDB 2va8 chain A

3D model

Region: 575 - 1113
Aligned: 515
Modelled: 518
Confidence: 100.0%
Identity: 16%
PDB header:hydrolase
Chain: A: PDB Molecule:ski2-type helicase;
PDBTitle: dna repair helicase hel308

Phyre2

PDB 2p6u chain A

3D model

Region: 592 - 1113
Aligned: 500
Modelled: 508
Confidence: 100.0%
Identity: 20%
PDB header:dna binding protein
Chain: A: PDB Molecule:afuhel308 helicase;
PDBTitle: apo structure of the hel308 superfamily 2 helicase

Phyre2

PDB 2zj8 chain A

3D model

Region: 574 - 1113
Aligned: 526
Modelled: 540
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: A: PDB Molecule:putative ski2-type helicase;
PDBTitle: archaeal dna helicase hjm apo state in form 2

Phyre2

PDB 8ohm chain A domain 2

3D model

Region: 797 - 1045
Aligned: 231
Modelled: 249
Confidence: 100.0%
Identity: 17%
Fold: P-loop containing nucleoside triphosphate hydrolases
Superfamily: P-loop containing nucleoside triphosphate hydrolases
Family: RNA helicase

Phyre2

PDB 2zj2 chain A

3D model

Region: 574 - 1139
Aligned: 548
Modelled: 566
Confidence: 100.0%
Identity: 17%
PDB header:hydrolase
Chain: A: PDB Molecule:putative ski2-type helicase;
PDBTitle: archaeal dna helicase hjm apo state in form 1

Phyre2

PDB 2v6j chain A

3D model

Region: 606 - 928
Aligned: 276
Modelled: 314
Confidence: 100.0%
Identity: 20%
PDB header:hydrolase
Chain: A: PDB Molecule:rna helicase;
PDBTitle: kokobera virus helicase: mutant met47thr

Phyre2

PDB 4f92 chain B

3D model

Region: 557 - 1073
Aligned: 488
Modelled: 495
Confidence: 100.0%
Identity: 20%
PDB header:hydrolase
Chain: B: PDB Molecule:u5 small nuclear ribonucleoprotein 200 kda helicase;
PDBTitle: brr2 helicase region s1087l

Phyre2
1

c3kx2A_
2

c1cu1B_
3

c4b6eB_
4

c3i4uA_
5

c1a1vA_
6

c2f55C_
7

c2wv9A_
8

c2vbcA_
9

c1ymfA_
10

c2jlrA_
11

c3rc8A_
12

c2z83A_
13

c3llmB_
14

c2va8A_
15

c2p6uA_
16

c2zj8A_
17

d8ohma2
18

c2zj2A_
19

c2v6jA_
20

c4f92B_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3kx2A_



100.0 47 PDB header:hydrolase
Chain: A: PDB Molecule:pre-mrna-splicing factor atp-dependent rna
PDBTitle: crystal structure of prp43p in complex with adp
2c1cu1B_



100.0 19 PDB header:hydrolase
Chain: B: PDB Molecule:protein (protease/helicase ns3);
PDBTitle: crystal structure of an enzyme complex from hepatitis c2 virus
3c4b6eB_



100.0 21 PDB header:hydrolase
Chain: B: PDB Molecule:non-structural protein 4a, serine protease ns3;
PDBTitle: discovery of an allosteric mechanism for the regulation of2 hcv ns3 protein function
4c3i4uA_



100.0 100 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dhx8;
PDBTitle: crystal structure analysis of a helicase associated domain
5c1a1vA_



100.0 18 PDB header:hydrolase/dna
Chain: A: PDB Molecule:protein (ns3 protein);
PDBTitle: hepatitis c virus ns3 helicase domain complexed with single2 stranded sdna
6c2f55C_



100.0 19 PDB header:hydrolase/dna
Chain: C: PDB Molecule:polyprotein;
PDBTitle: two hepatitis c virus ns3 helicase domains complexed with2 the same strand of dna
7c2wv9A_



100.0 17 PDB header:hydrolase
Chain: A: PDB Molecule:flavivirin protease ns2b regulatory subunit, flavivirin
PDBTitle: crystal structure of the ns3 protease-helicase from murray2 valley encephalitis virus
8c2vbcA_



100.0 15 PDB header:hydrolase
Chain: A: PDB Molecule:dengue 4 ns3 full-length protein;
PDBTitle: crystal structure of the ns3 protease-helicase from dengue2 virus
9c1ymfA_



100.0 15 PDB header:hydrolase
Chain: A: PDB Molecule:genome polyprotein [contains: flavivirin
PDBTitle: crystal structure of yellow fever virus ns3 helicase2 complexed with adp
10c2jlrA_



100.0 16 PDB header:hydrolase
Chain: A: PDB Molecule:serine protease subunit ns3;
PDBTitle: dengue virus 4 ns3 helicase in complex with amppnp
11c3rc8A_



100.0 18 PDB header:hydrolase/rna
Chain: A: PDB Molecule:atp-dependent rna helicase supv3l1, mitochondrial;
PDBTitle: human mitochondrial helicase suv3 in complex with short rna fragment
12c2z83A_



100.0 19 PDB header:viral protein
Chain: A: PDB Molecule:helicase/nucleoside triphosphatase;
PDBTitle: crystal structure of catalytic domain of japanese2 encephalitis virus ns3 helicase/nucleoside triphosphatase3 at a resolution 1.8
13c3llmB_



100.0 31 PDB header:hydrolase
Chain: B: PDB Molecule:atp-dependent rna helicase a;
PDBTitle: crystal structure analysis of a rna helicase
14c2va8A_



100.0 16 PDB header:hydrolase
Chain: A: PDB Molecule:ski2-type helicase;
PDBTitle: dna repair helicase hel308
15c2p6uA_



100.0 20 PDB header:dna binding protein
Chain: A: PDB Molecule:afuhel308 helicase;
PDBTitle: apo structure of the hel308 superfamily 2 helicase
16c2zj8A_



100.0 17 PDB header:hydrolase
Chain: A: PDB Molecule:putative ski2-type helicase;
PDBTitle: archaeal dna helicase hjm apo state in form 2
17d8ohma2



100.0 17 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RNA helicase
18c2zj2A_



100.0 17 PDB header:hydrolase
Chain: A: PDB Molecule:putative ski2-type helicase;
PDBTitle: archaeal dna helicase hjm apo state in form 1
19c2v6jA_



100.0 20 PDB header:hydrolase
Chain: A: PDB Molecule:rna helicase;
PDBTitle: kokobera virus helicase: mutant met47thr
20c4f92B_



100.0 20 PDB header:hydrolase
Chain: B: PDB Molecule:u5 small nuclear ribonucleoprotein 200 kda helicase;
PDBTitle: brr2 helicase region s1087l
21c4bgdA_



not modelled 99.9 14 PDB header:transcription
Chain: A: PDB Molecule:pre-mrna-splicing helicase brr2;
PDBTitle: crystal structure of brr2 in complex with the jab1/mpn domain of prp8
22c2qeqA_



not modelled 99.9 17 PDB header:hydrolase
Chain: A: PDB Molecule:flavivirin protease ns3 catalytic subunit;
PDBTitle: crystal structure of kunjin virus ns3 helicase
23c2xgjA_



not modelled 99.9 22 PDB header:hydrolase/rna
Chain: A: PDB Molecule:atp-dependent rna helicase dob1;
PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance
24c4a4zA_



not modelled 99.9 22 PDB header:hydrolase
Chain: A: PDB Molecule:antiviral helicase ski2;
PDBTitle: crystal structure of the s. cerevisiae dexh helicase ski2 bound to2 amppnp
25d1yksa2



not modelled 99.9 17 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RNA helicase
26c3bxzA_



not modelled 99.9 16 PDB header:transport protein
Chain: A: PDB Molecule:preprotein translocase subunit seca;
PDBTitle: crystal structure of the isolated dead motor domains from2 escherichia coli seca
27c3l9oA_



not modelled 99.9 18 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dob1;
PDBTitle: crystal structure of mtr4, a co-factor of the nuclear exosome
28c2v1xB_



not modelled 99.9 15 PDB header:hydrolase
Chain: B: PDB Molecule:atp-dependent dna helicase q1;
PDBTitle: crystal structure of human recq-like dna helicase
29d2bmfa2



not modelled 99.9 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RNA helicase
30c3ewsA_



not modelled 99.9 14 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase ddx19b;
PDBTitle: human dead-box rna-helicase ddx19 in complex with adp
31c2db3D_



not modelled 99.9 18 PDB header:hydrolase/rna
Chain: D: PDB Molecule:atp-dependent rna helicase vasa;
PDBTitle: structural basis for rna unwinding by the dead-box protein2 drosophila vasa
32c2eyqA_



not modelled 99.9 18 PDB header:hydrolase
Chain: A: PDB Molecule:transcription-repair coupling factor;
PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor
33c3fhtA_



not modelled 99.9 14 PDB header:hydrolase/rna
Chain: A: PDB Molecule:atp-dependent rna helicase ddx19b;
PDBTitle: crystal structure of human dbp5 in complex with amppnp and rna
34c1oywA_



not modelled 99.9 17 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent dna helicase;
PDBTitle: structure of the recq catalytic core
35c1gm5A_



not modelled 99.8 17 PDB header:helicase
Chain: A: PDB Molecule:recg;
PDBTitle: structure of recg bound to three-way dna junction
36c1xtkA_



not modelled 99.8 13 PDB header:gene regulation
Chain: A: PDB Molecule:probable atp-dependent rna helicase p47;
PDBTitle: structure of decd to dead mutation of human uap56
37c4gl2A_



not modelled 99.8 19 PDB header:rna binding protein/rna
Chain: A: PDB Molecule:interferon-induced helicase c domain-containing protein 1;
PDBTitle: structural basis for dsrna duplex backbone recognition by mda5
38c3pexA_



not modelled 99.8 17 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dbp5;
PDBTitle: s. cerevisiae dbp5 l327v bound to gle1 h337r and ip6
39c1hv8B_



not modelled 99.8 15 PDB header:rna binding protein
Chain: B: PDB Molecule:putative atp-dependent rna helicase mj0669;
PDBTitle: crystal structure of a dead box protein from the2 hyperthermophile methanococcus jannaschii
40c2fsgA_



not modelled 99.8 21 PDB header:protein transport
Chain: A: PDB Molecule:preprotein translocase seca subunit;
PDBTitle: complex seca:atp from escherichia coli
41c1s2mA_



not modelled 99.8 14 PDB header:rna binding protein
Chain: A: PDB Molecule:putative atp-dependent rna helicase dhh1;
PDBTitle: crystal structure of the dead box protein dhh1p
42c1gl9B_



not modelled 99.7 17 PDB header:topoisomerase
Chain: B: PDB Molecule:reverse gyrase;
PDBTitle: archaeoglobus fulgidus reverse gyrase complexed with adpnp
43c3i5yA_



not modelled 99.7 20 PDB header:hydrolase/rna
Chain: A: PDB Molecule:atp-dependent rna helicase mss116;
PDBTitle: structure of mss116p bound to ssrna containing a single 5-bru and amp-2 pnp
44c2vsxA_



not modelled 99.7 12 PDB header:translation/hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase eif4a;
PDBTitle: crystal structure of a translation initiation complex
45c4ddvA_



not modelled 99.7 16 PDB header:hydrolase
Chain: A: PDB Molecule:reverse gyrase;
PDBTitle: thermotoga maritima reverse gyrase, triclinic form
46c2z0mA_



not modelled 99.7 17 PDB header:rna binding protein
Chain: A: PDB Molecule:337aa long hypothetical atp-dependent rna
PDBTitle: crystal structure of hypothetical atp-dependent rna2 helicase from sulfolobus tokodaii
47c3tmiA_



not modelled 99.7 19 PDB header:hydrolase/rna
Chain: A: PDB Molecule:atp-dependent rna helicase ddx58;
PDBTitle: structural basis for rna recognition and activation of rig-i
48c2i4iA_



not modelled 99.7 17 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase ddx3x;
PDBTitle: crystal structure of human dead-box rna helicase ddx3x
49c1wp9D_



not modelled 99.7 19 PDB header:hydrolase
Chain: D: PDB Molecule:atp-dependent rna helicase, putative;
PDBTitle: crystal structure of pyrococcus furiosus hef helicase domain
50c2ocaA_



not modelled 99.7 13 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent dna helicase uvsw;
PDBTitle: the crystal structure of t4 uvsw
51c3eiqD_



not modelled 99.6 15 PDB header:hydrolase/antitumor protein
Chain: D: PDB Molecule:eukaryotic initiation factor 4a-i;
PDBTitle: crystal structure of pdcd4-eif4a
52c2hxyC_



not modelled 99.6 13 PDB header:hydrolase
Chain: C: PDB Molecule:probable atp-dependent rna helicase ddx48;
PDBTitle: crystal structure of human apo-eif4aiii
53c2fsgB_



not modelled 99.6 20 PDB header:protein transport
Chain: B: PDB Molecule:preprotein translocase seca subunit;
PDBTitle: complex seca:atp from escherichia coli
54c1c4oA_



not modelled 99.6 15 PDB header:replication
Chain: A: PDB Molecule:dna nucleotide excision repair enzyme uvrb;
PDBTitle: crystal structure of the dna nucleotide excision repair enzyme uvrb2 from thermus thermophilus
55c3tbkA_



not modelled 99.6 18 PDB header:hydrolase
Chain: A: PDB Molecule:rig-i helicase domain;
PDBTitle: mouse rig-i atpase domain
56c3oiyB_



not modelled 99.6 15 PDB header:isomerase
Chain: B: PDB Molecule:reverse gyrase helicase domain;
PDBTitle: helicase domain of reverse gyrase from thermotoga maritima
57c1tf2A_



not modelled 99.6 27 PDB header:protein transport
Chain: A: PDB Molecule:preprotein translocase seca subunit;
PDBTitle: crystal structure of seca:adp in an open conformation from2 bacillus subtilis
58c2fwrA_



not modelled 99.5 19 PDB header:dna binding protein
Chain: A: PDB Molecule:dna repair protein rad25;
PDBTitle: structure of archaeoglobus fulgidis xpb
59c3h1tA_



not modelled 99.5 18 PDB header:hydrolase
Chain: A: PDB Molecule:type i site-specific restriction-modification
PDBTitle: the fragment structure of a putative hsdr subunit of a type2 i restriction enzyme from vibrio vulnificus yj016
60c3fhoB_



not modelled 99.5 18 PDB header:hydrolase
Chain: B: PDB Molecule:atp-dependent rna helicase dbp5;
PDBTitle: structure of s. pombe dbp5
61d1a1va1



not modelled 99.5 21 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RNA helicase
62c3dl8B_



not modelled 99.4 25 PDB header:protein transport
Chain: B: PDB Molecule:protein translocase subunit seca;
PDBTitle: structure of the complex of aquifex aeolicus secyeg and2 bacillus subtilis seca
63d1yksa1



not modelled 99.4 19 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RNA helicase
64d2p6ra3



not modelled 99.3 15 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
65d1a1va2



not modelled 99.3 20 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RNA helicase
66c3crw1_



not modelled 99.3 20 PDB header:hydrolase
Chain: 1: PDB Molecule:xpd/rad3 related dna helicase;
PDBTitle: "xpd_apo"
67d1q0ua_



not modelled 99.3 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
68d1gkub1



not modelled 99.2 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Helicase-like "domain" of reverse gyrase
69c2d7dA_



not modelled 99.2 19 PDB header:hydrolase/dna
Chain: A: PDB Molecule:uvrabc system protein b;
PDBTitle: structural insights into the cryptic dna dependent atp-ase2 activity of uvrb
70c3fhcB_



not modelled 99.2 17 PDB header:transport protein/hydrolase
Chain: B: PDB Molecule:atp-dependent rna helicase ddx19b;
PDBTitle: crystal structure of human dbp5 in complex with nup214
71c3fmoB_



not modelled 99.2 17 PDB header:oncoprotein/hydrolase
Chain: B: PDB Molecule:atp-dependent rna helicase ddx19b;
PDBTitle: crystal structure of the nucleoporin nup214 in complex with the dead-2 box helicase ddx19
72d1gl9b1



not modelled 99.2 18 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Helicase-like "domain" of reverse gyrase
73c2j7pA_



not modelled 99.2 20 PDB header:signal recognition
Chain: A: PDB Molecule:signal recognition particle protein;
PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy
74c3dkpA_



not modelled 99.1 14 PDB header:hydrolase
Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx52;
PDBTitle: human dead-box rna-helicase ddx52, conserved domain i in complex with2 adp
75d1veca_



not modelled 99.1 15 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
76d2eyqa5



not modelled 99.1 25 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
77d1t6na_



not modelled 99.1 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
78d1qdea_



not modelled 99.1 13 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
79c2cnwF_



not modelled 99.1 17 PDB header:signal recognition
Chain: F: PDB Molecule:cell division protein ftsy;
PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy
80c2vl7A_



not modelled 99.1 22 PDB header:unknown function
Chain: A: PDB Molecule:xpd;
PDBTitle: structure of s. tokodaii xpd4
81d1hv8a1



not modelled 99.1 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
82c3fmpD_



not modelled 99.1 15 PDB header:oncoprotein/hydrolase
Chain: D: PDB Molecule:atp-dependent rna helicase ddx19b;
PDBTitle: crystal structure of the nucleoporin nup214 in complex with the dead-2 box helicase ddx19
83d2eyqa3



not modelled 99.1 15 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
84c2kbeA_



not modelled 99.1 16 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dbp5;
PDBTitle: solution structure of amino-terminal domain of dbp5p
85c2w74B_



not modelled 99.1 13 PDB header:hydrolase
Chain: B: PDB Molecule:type i restriction enzyme ecor124ii r protein;
PDBTitle: mutant (k220r) of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp
86d1s2ma1



not modelled 99.1 17 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
87d2p6ra4



not modelled 99.1 20 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
88c2pl3A_



not modelled 99.0 15 PDB header:hydrolase
Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx10;
PDBTitle: human dead-box rna helicase ddx10, dead domain in complex with adp
89c3ly5A_



not modelled 99.0 15 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase ddx18;
PDBTitle: ddx18 dead-domain
90c3b6eA_



not modelled 99.0 16 PDB header:hydrolase
Chain: A: PDB Molecule:interferon-induced helicase c domain-containing protein 1;
PDBTitle: crystal structure of human dech-box rna helicase mda5 (melanoma2 differentiation-associated protein 5), dech-domain
91c2oxcA_



not modelled 99.0 15 PDB header:hydrolase
Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx20;
PDBTitle: human dead-box rna helicase ddx20, dead domain in complex2 with adp
92d1wp9a1



not modelled 99.0 15 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
93d2g9na1



not modelled 99.0 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
94c4db4A_



not modelled 99.0 18 PDB header:rna-binding protein/dna,rna
Chain: A: PDB Molecule:atp-dependent rna helicase mss116, mitochondrial;
PDBTitle: mss116p dead-box helicase domain 2 bound to a chimaeric rna-dna duplex
95c3berA_



not modelled 99.0 19 PDB header:hydrolase
Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx47;
PDBTitle: human dead-box rna-helicase ddx47, conserved domain i in complex with2 amp
96d2j0sa1



not modelled 99.0 13 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
97d2j0sa2



not modelled 98.9 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
98c2gxqA_



not modelled 98.9 18 PDB header:hydrolase
Chain: A: PDB Molecule:heat resistant rna dependent atpase;
PDBTitle: hera n-terminal domain in complex with amp, crystal form 1
99c3iuyB_



not modelled 98.9 18 PDB header:hydrolase
Chain: B: PDB Molecule:probable atp-dependent rna helicase ddx53;
PDBTitle: crystal structure of ddx53 dead-box domain
100d1c4oa2



not modelled 98.9 15 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
101c2px0D_



not modelled 98.9 21 PDB header:biosynthetic protein
Chain: D: PDB Molecule:flagellar biosynthesis protein flhf;
PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+)
102d1s2ma2



not modelled 98.9 14 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
103d1oywa3



not modelled 98.9 17 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
104d1wrba1



not modelled 98.9 17 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
105c1z3iX_



not modelled 98.9 16 PDB header:recombination/dna binding
Chain: X: PDB Molecule:similar to rad54-like;
PDBTitle: structure of the swi2/snf2 chromatin remodeling domain of eukaryotic2 rad54
106c3mwyW_



not modelled 98.9 19 PDB header:hydrolase
Chain: W: PDB Molecule:chromo domain-containing protein 1;
PDBTitle: crystal structure of the chromodomain-atpase portion of the yeast chd12 chromatin remodeler
107c2vdaA_



not modelled 98.8 24 PDB header:protein transport
Chain: A: PDB Molecule:translocase subunit seca;
PDBTitle: solution structure of the seca-signal peptide complex
108c3fe2B_



not modelled 98.8 17 PDB header:hydrolase
Chain: B: PDB Molecule:probable atp-dependent rna helicase ddx5;
PDBTitle: human dead-box rna helicase ddx5 (p68), conserved domain i in complex2 with adp
109c2yjtD_



not modelled 98.8 16 PDB header:hydrolase inhibitor/hydrolase
Chain: D: PDB Molecule:atp-dependent rna helicase srmb;
PDBTitle: crystal structure of e. coli dead-box protein srmb bound to2 regulator of ribonuclease activity a (rraa)
110d1rifa_



not modelled 98.8 13 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:DNA helicase UvsW
111d1t5la2



not modelled 98.8 17 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
112d1jr6a_



not modelled 98.8 25 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:RNA helicase
113c3earA_



not modelled 98.8 21 PDB header:hydrolase
Chain: A: PDB Molecule:hera;
PDBTitle: novel dimerization motif in the dead box rna helicase hera: form 1,2 partial dimer
114c2p6nA_



not modelled 98.8 23 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase ddx41;
PDBTitle: human dead-box rna helicase ddx41, helicase domain
115d1wp9a2



not modelled 98.8 24 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
116c2hjvB_



not modelled 98.8 21 PDB header:hydrolase
Chain: B: PDB Molecule:atp-dependent rna helicase dbpa;
PDBTitle: structure of the second domain (residues 207-368) of the2 bacillus subtilis yxin protein
117d1hv8a2



not modelled 98.8 19 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
118d1gm5a3



not modelled 98.7 16 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain
119c2w00B_



not modelled 98.7 14 PDB header:hydrolase
Chain: B: PDB Molecule:hsdr;
PDBTitle: crystal structure of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp
120d2g2ja1



not modelled 98.7 19 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:Tandem AAA-ATPase domain

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