Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ96F07
DateFri May 25 09:33:28 BST 2012
Unique Job IDcc8118a5b6078247

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3p8cA_
Top template information
PDB header:protein binding
Chain: A: PDB Molecule:cytoplasmic fmr1-interacting protein 1;
PDBTitle: structure and control of the actin regulatory wave complex
Confidence and coverage
Confidence:100.0% Coverage: 92%
1175 residues ( 92% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
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   .........70.........80.........90.........100.........110.........120
Sequence  EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
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   .........130.........140.........150.........160.........170.........180
Sequence  KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
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   .........190.........200.........210.........220.........230.........240
Sequence  VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
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   .........250.........260.........270.........280.........290.........300
Sequence  IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
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   .........310.........320.........330.........340.........350.........360
Sequence  QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
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   .........370.........380.........390.........400.........410.........420
Sequence  SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
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   .........430.........440.........450.........460.........470.........480
Sequence  KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
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   .........490.........500.........510.........520.........530.........540
Sequence  AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
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   .........550.........560.........570.........580.........590.........600
Sequence  GFDIKVPRRAVGPSSTQACQWSPRALFHPTGGTQGRRGCRSLLYMVRTMLESLIADKSGS
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   .........610.........620.........630.........640.........650.........660
Sequence  KKTLRSSLDGPIVLAIEDFHKQSFFFTHLLNISEALQQCCDLSQLWFREFFLELTMGRRI
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   .........670.........680.........690.........700.........710.........720
Sequence  QFPIEMSMPWILTDHILETKEPSMMEYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVN
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   .........730.........740.........750.........760.........770.........780
Sequence  LCFDQFVYKLADQIFAYYKAMAGSVLLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQ
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   .........790.........800.........810.........820.........830.........840
Sequence  LLGRSIDLNRLITQRISAAMYKSLDQAISRFESEDLTSIVELEWLLEINRLTHRLLCKHM
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   .........850.........860.........870.........880.........890.........900
Sequence  TLDSFDAMFREANHNVSAPYGRITLHVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQ
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   .........910.........920.........930.........940.........950.........960
Sequence  RDKPANVQPYYLYGSKPLNIAYSHIYSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKI
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   .........970.........980.........990.........1000.........1010.........1020
Sequence  VKSLLQGTILQYVKTLIEVMPKICRLPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQS
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   .........1030.........1040.........1050.........1060.........1070.........1080
Sequence  LREVGNAILFCLLIEQALSQEEVCDLLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAP
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   .........1090.........1100.........1110.........1120.........1130.........1140
Sequence  LHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTN
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   .........1150.........1160.........1170.........1180.........1190.........1200
Sequence  GVMHVDECVEFHRLWSAMQFVYCIPVGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDL
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   .........1210.........1220.........1230.........1240.........1250.........1260
Sequence  FDFCYHLLKVQRQDGKDEIIKNVPLKKMADRIRKYQILNNEVFAILNKYMKSVETDSSTV
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   .........1270........
Sequence  EHVRCFQPPIHQSLATTC
Secondary structure 








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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3p8c chain A

3D model

Region: 5 - 1274
Aligned: 1175
Modelled: 1211
Confidence: 100.0%
Identity: 89%
PDB header:protein binding
Chain: A: PDB Molecule:cytoplasmic fmr1-interacting protein 1;
PDBTitle: structure and control of the actin regulatory wave complex

Phyre2

PDB 3p8c chain B

3D model

Region: 64 - 1053
Aligned: 810
Modelled: 810
Confidence: 94.1%
Identity: 13%
PDB header:protein binding
Chain: B: PDB Molecule:nck-associated protein 1;
PDBTitle: structure and control of the actin regulatory wave complex

Phyre2

PDB 1ug8 chain A

3D model

Region: 1118 - 1153
Aligned: 29
Modelled: 36
Confidence: 59.2%
Identity: 24%
Fold: IF3-like
Superfamily: R3H domain
Family: R3H domain

Phyre2

PDB 1ayi chain A

3D model

Region: 672 - 708
Aligned: 37
Modelled: 37
Confidence: 49.8%
Identity: 27%
Fold: Acyl carrier protein-like
Superfamily: Colicin E immunity proteins
Family: Colicin E immunity proteins

Phyre2

PDB 2vlq chain A domain 1

3D model

Region: 672 - 708
Aligned: 37
Modelled: 37
Confidence: 48.2%
Identity: 30%
Fold: Acyl carrier protein-like
Superfamily: Colicin E immunity proteins
Family: Colicin E immunity proteins

Phyre2

PDB 2no8 chain A

3D model

Region: 672 - 708
Aligned: 37
Modelled: 37
Confidence: 47.1%
Identity: 24%
PDB header:immune system
Chain: A: PDB Molecule:colicin-e2 immunity protein;
PDBTitle: nmr structure analysis of the colicin immuntiy protein im2

Phyre2

PDB 1gxh chain A

3D model

Region: 672 - 708
Aligned: 37
Modelled: 37
Confidence: 46.1%
Identity: 22%
Fold: Acyl carrier protein-like
Superfamily: Colicin E immunity proteins
Family: Colicin E immunity proteins

Phyre2

PDB 1i5p chain A

3D model

Region: 919 - 1029
Aligned: 102
Modelled: 111
Confidence: 43.5%
Identity: 10%
PDB header:toxin
Chain: A: PDB Molecule:pesticidial crystal protein cry2aa;
PDBTitle: insecticidal crystal protein cry2aa

Phyre2

PDB 1g5m chain A

3D model

Region: 1173 - 1192
Aligned: 18
Modelled: 20
Confidence: 43.0%
Identity: 44%
Fold: Toxins' membrane translocation domains
Superfamily: Bcl-2 inhibitors of programmed cell death
Family: Bcl-2 inhibitors of programmed cell death

Phyre2

PDB 1zy3 chain A domain 1

3D model

Region: 1173 - 1202
Aligned: 30
Modelled: 30
Confidence: 34.1%
Identity: 23%
Fold: Toxins' membrane translocation domains
Superfamily: Bcl-2 inhibitors of programmed cell death
Family: Bcl-2 inhibitors of programmed cell death

Phyre2

PDB 1ysg chain A domain 1

3D model

Region: 1173 - 1192
Aligned: 18
Modelled: 20
Confidence: 34.1%
Identity: 33%
Fold: Toxins' membrane translocation domains
Superfamily: Bcl-2 inhibitors of programmed cell death
Family: Bcl-2 inhibitors of programmed cell death

Phyre2

PDB 2c9k chain A

3D model

Region: 920 - 1032
Aligned: 104
Modelled: 113
Confidence: 33.6%
Identity: 14%
PDB header:toxin
Chain: A: PDB Molecule:pesticidal crystal protein cry4aa;
PDBTitle: structure of the functional form of the mosquito-larvicidal2 cry4aa toxin from bacillus thuringiensis at 2.8 a3 resolution

Phyre2

PDB 2wuk chain D

3D model

Region: 427 - 455
Aligned: 28
Modelled: 29
Confidence: 32.2%
Identity: 18%
PDB header:cell cycle
Chain: D: PDB Molecule:septum site-determining protein diviva;
PDBTitle: diviva n-terminal domain, f17a mutant

Phyre2

PDB 3b5i chain B

3D model

Region: 813 - 863
Aligned: 51
Modelled: 51
Confidence: 30.0%
Identity: 10%
PDB header:transferase
Chain: B: PDB Molecule:s-adenosyl-l-methionine:salicylic acid carboxyl
PDBTitle: crystal structure of indole-3-acetic acid methyltransferase

Phyre2

PDB 2xa0 chain A

3D model

Region: 1173 - 1184
Aligned: 12
Modelled: 12
Confidence: 28.7%
Identity: 50%
PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis regulator bcl-2;
PDBTitle: crystal structure of bcl-2 in complex with a bax bh32 peptide

Phyre2

PDB 2yv6 chain A

3D model

Region: 1173 - 1184
Aligned: 12
Modelled: 12
Confidence: 27.5%
Identity: 42%
PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2 homologous antagonist/killer;
PDBTitle: crystal structure of human bcl-2 family protein bak

Phyre2

PDB 2pon chain B domain 1

3D model

Region: 1173 - 1192
Aligned: 18
Modelled: 20
Confidence: 27.3%
Identity: 33%
Fold: Toxins' membrane translocation domains
Superfamily: Bcl-2 inhibitors of programmed cell death
Family: Bcl-2 inhibitors of programmed cell death

Phyre2

PDB 2o2f chain A

3D model

Region: 1173 - 1184
Aligned: 12
Modelled: 12
Confidence: 26.9%
Identity: 50%
PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis regulator bcl-2;
PDBTitle: solution structure of the anti-apoptotic protein bcl-2 in2 complex with an acyl-sulfonamide-based ligand

Phyre2

PDB 2i3s chain F

3D model

Region: 443 - 460
Aligned: 18
Modelled: 18
Confidence: 26.2%
Identity: 50%
PDB header:cell cycle
Chain: F: PDB Molecule:checkpoint serine/threonine-protein kinase;
PDBTitle: bub3 complex with bub1 glebs motif

Phyre2

PDB 1pq1 chain A

3D model

Region: 1173 - 1184
Aligned: 12
Modelled: 12
Confidence: 26.1%
Identity: 42%
Fold: Toxins' membrane translocation domains
Superfamily: Bcl-2 inhibitors of programmed cell death
Family: Bcl-2 inhibitors of programmed cell death

Phyre2
1

c3p8cA_
2

c3p8cB_
3

d1ug8a_
4

d1ayia_
5

d2vlqa1
6

c2no8A_
7

d1gxha_
8

c1i5pA_
9

d1g5ma_
10

d1zy3a1
11

d1ysga1
12

c2c9kA_
13

c2wukD_
14

c3b5iB_
15

c2xa0A_
16

c2yv6A_
17

d2ponb1
18

c2o2fA_
19

c2i3sF_
20

d1pq1a_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3p8cA_



100.0 89 PDB header:protein binding
Chain: A: PDB Molecule:cytoplasmic fmr1-interacting protein 1;
PDBTitle: structure and control of the actin regulatory wave complex
2c3p8cB_



94.1 13 PDB header:protein binding
Chain: B: PDB Molecule:nck-associated protein 1;
PDBTitle: structure and control of the actin regulatory wave complex
3d1ug8a_



59.2 24 Fold:IF3-like
Superfamily:R3H domain
Family:R3H domain
4d1ayia_



49.8 27 Fold:Acyl carrier protein-like
Superfamily:Colicin E immunity proteins
Family:Colicin E immunity proteins
5d2vlqa1



48.2 30 Fold:Acyl carrier protein-like
Superfamily:Colicin E immunity proteins
Family:Colicin E immunity proteins
6c2no8A_



47.1 24 PDB header:immune system
Chain: A: PDB Molecule:colicin-e2 immunity protein;
PDBTitle: nmr structure analysis of the colicin immuntiy protein im2
7d1gxha_



46.1 22 Fold:Acyl carrier protein-like
Superfamily:Colicin E immunity proteins
Family:Colicin E immunity proteins
8c1i5pA_



43.5 10 PDB header:toxin
Chain: A: PDB Molecule:pesticidial crystal protein cry2aa;
PDBTitle: insecticidal crystal protein cry2aa
9d1g5ma_



43.0 44 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
10d1zy3a1



34.1 23 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
11d1ysga1



34.1 33 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
12c2c9kA_



33.6 14 PDB header:toxin
Chain: A: PDB Molecule:pesticidal crystal protein cry4aa;
PDBTitle: structure of the functional form of the mosquito-larvicidal2 cry4aa toxin from bacillus thuringiensis at 2.8 a3 resolution
13c2wukD_



32.2 18 PDB header:cell cycle
Chain: D: PDB Molecule:septum site-determining protein diviva;
PDBTitle: diviva n-terminal domain, f17a mutant
14c3b5iB_



30.0 10 PDB header:transferase
Chain: B: PDB Molecule:s-adenosyl-l-methionine:salicylic acid carboxyl
PDBTitle: crystal structure of indole-3-acetic acid methyltransferase
15c2xa0A_



28.7 50 PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis regulator bcl-2;
PDBTitle: crystal structure of bcl-2 in complex with a bax bh32 peptide
16c2yv6A_



27.5 42 PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2 homologous antagonist/killer;
PDBTitle: crystal structure of human bcl-2 family protein bak
17d2ponb1



27.3 33 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
18c2o2fA_



26.9 50 PDB header:apoptosis
Chain: A: PDB Molecule:apoptosis regulator bcl-2;
PDBTitle: solution structure of the anti-apoptotic protein bcl-2 in2 complex with an acyl-sulfonamide-based ligand
19c2i3sF_



26.2 50 PDB header:cell cycle
Chain: F: PDB Molecule:checkpoint serine/threonine-protein kinase;
PDBTitle: bub3 complex with bub1 glebs motif
20d1pq1a_



26.1 42 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
21d1i5pa3



not modelled 25.4 11 Fold:Toxins' membrane translocation domains
Superfamily:delta-Endotoxin (insectocide), N-terminal domain
Family:delta-Endotoxin (insectocide), N-terminal domain
22d1m6ex_



not modelled 25.0 22 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Salicylic acid carboxyl methyltransferase (SAMT)
23c2y9zB_



not modelled 24.9 19 PDB header:transcription
Chain: B: PDB Molecule:iswi one complex protein 3;
PDBTitle: chromatin remodeling factor isw1a(del_atpase) in dna complex
24c3mk4A_



not modelled 24.7 15 PDB header:protein transport
Chain: A: PDB Molecule:peroxisomal biogenesis factor 3;
PDBTitle: x-ray structure of human pex3 in complex with a pex19 derived peptide
25c2iv1J_



not modelled 23.4 40 PDB header:lyase
Chain: J: PDB Molecule:cyanate hydratase;
PDBTitle: site directed mutagenesis of key residues involved in the2 catalytic mechanism of cyanase
26d2ca5a1



not modelled 23.0 16 Fold:Long alpha-hairpin
Superfamily:MxiH-like
Family:MxiH-like
27d1niga_



not modelled 23.0 20 Fold:Ferritin-like
Superfamily:Cobalamin adenosyltransferase-like
Family:Hypothetical protein Ta1238
28d1q59a_



not modelled 22.4 10 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
29d1cpca_



not modelled 22.4 26 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
30d1kzyc2



not modelled 21.3 33 Fold:BRCT domain
Superfamily:BRCT domain
Family:53BP1
31d1dwka2



not modelled 20.5 42 Fold:Cyanase C-terminal domain
Superfamily:Cyanase C-terminal domain
Family:Cyanase C-terminal domain
32d1alua_



not modelled 20.3 9 Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Long-chain cytokines
33d1o7xa_



not modelled 20.2 26 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
34d1ewqa1



not modelled 17.7 18 Fold:DNA repair protein MutS, domain III
Superfamily:DNA repair protein MutS, domain III
Family:DNA repair protein MutS, domain III
35c2i68B_



not modelled 17.2 31 PDB header:transport protein
Chain: B: PDB Molecule:protein emre;
PDBTitle: cryo-em based theoretical model structure of transmembrane2 domain of the multidrug-resistance antiporter from e. coli3 emre
36c3eb7B_



not modelled 16.5 16 PDB header:toxin
Chain: B: PDB Molecule:insecticidal delta-endotoxin cry8ea1;
PDBTitle: crystal structure of insecticidal delta-endotoxin cry8ea1 from2 bacillus thuringiensis at 2.2 angstroms resolution
37c2dw3A_



not modelled 16.2 43 PDB header:photosynthesis
Chain: A: PDB Molecule:intrinsic membrane protein pufx;
PDBTitle: solution structure of the rhodobacter sphaeroides pufx2 membrane protein
38c1rpqW_



not modelled 16.1 38 PDB header:membrane protein
Chain: W: PDB Molecule:peptide e131;
PDBTitle: high affinity ige receptor (alpha chain) complexed with tight-binding2 e131 'zeta' peptide from phage display
39c2dlrA_



not modelled 15.7 11 PDB header:signaling protein
Chain: A: PDB Molecule:regulator of g-protein signaling 10;
PDBTitle: solution structure of the rgs domain of human regulator of2 g-protein signaling 10
40d2v4jc1



not modelled 15.3 19 Fold:DsrC, the gamma subunit of dissimilatory sulfite reductase
Superfamily:DsrC, the gamma subunit of dissimilatory sulfite reductase
Family:DsrC, the gamma subunit of dissimilatory sulfite reductase
41c2zbkA_



not modelled 14.4 13 PDB header:isomerase
Chain: A: PDB Molecule:type ii dna topoisomerase vi subunit a;
PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms
42d1f99a_



not modelled 14.2 24 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
43d1g73a_



not modelled 14.1 14 Fold:Spectrin repeat-like
Superfamily:Smac/diablo
Family:Smac/diablo
44c2ketA_



not modelled 13.8 50 PDB header:antibiotic
Chain: A: PDB Molecule:cathelicidin-6;
PDBTitle: solution structure of bmap-27
45c2h12C_



not modelled 13.6 12 PDB header:transferase
Chain: C: PDB Molecule:citrate synthase;
PDBTitle: structure of acetobacter aceti citrate synthase complexed2 with oxaloacetate and carboxymethyldethia coenzyme a (cmx)
46c1wpaA_



not modelled 13.5 13 PDB header:cell adhesion
Chain: A: PDB Molecule:occludin;
PDBTitle: 1.5 angstrom crystal structure of human occludin fragment2 413-522
47d1fewa_



not modelled 13.3 14 Fold:Spectrin repeat-like
Superfamily:Smac/diablo
Family:Smac/diablo
48c1gs0B_



not modelled 12.9 22 PDB header:transferase
Chain: B: PDB Molecule:poly (adp-ribose) polymerase-2;
PDBTitle: crystal structure of the catalytic fragment of murine poly2 (adp-ribose) polymerase-2
49d1qzga_



not modelled 12.8 29 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
50d1bxla_



not modelled 12.7 29 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
51d1jboa_



not modelled 12.6 24 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
52c2eg5C_



not modelled 12.3 12 PDB header:transferase
Chain: C: PDB Molecule:xanthosine methyltransferase;
PDBTitle: the structure of xanthosine methyltransferase
53d1eyxb_



not modelled 12.2 18 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
54c3ongA_



not modelled 12.1 14 PDB header:ligase
Chain: A: PDB Molecule:ubiquitin-activating enzyme e1-like;
PDBTitle: crystal structure of uba2ufd-ubc9: insights into e1-e2 interactions in2 sumo pathways
55c2vtgA_



not modelled 11.7 14 PDB header:metal-binding protein
Chain: A: PDB Molecule:ionized calcium-binding adapter molecule 2;
PDBTitle: crystal structure of human iba2, trigonal crystal form
56c3msuA_



not modelled 11.6 15 PDB header:transferase
Chain: A: PDB Molecule:citrate synthase;
PDBTitle: crystal structure of citrate synthase from francisella tularensis
57c1dlcA_



not modelled 11.6 11 PDB header:toxin
Chain: A: PDB Molecule:delta-endotoxin cryiiia;
PDBTitle: crystal structure of insecticidal delta-endotoxin from2 bacillus thuringiensis at 2.5 angstroms resolution
58d1f16a_



not modelled 11.1 24 Fold:Toxins' membrane translocation domains
Superfamily:Bcl-2 inhibitors of programmed cell death
Family:Bcl-2 inhibitors of programmed cell death
59d1k4ta2



not modelled 10.8 23 Fold:DNA breaking-rejoining enzymes
Superfamily:DNA breaking-rejoining enzymes
Family:Eukaryotic DNA topoisomerase I, catalytic core
60c1vgmB_



not modelled 10.8 27 PDB header:transferase
Chain: B: PDB Molecule:378aa long hypothetical citrate synthase;
PDBTitle: crystal structure of an isozyme of citrate synthase from sulfolbus2 tokodaii strain7
61c3mhkA_



not modelled 10.5 22 PDB header:transferase
Chain: A: PDB Molecule:tankyrase-2;
PDBTitle: human tankyrase 2 - catalytic parp domain in complex with 2-(2-2 pyridyl)-7,8-dihydro-5h-thiino[4,3-d]pyrimidin-4-ol
62d1jlia_



not modelled 10.3 18 Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Short-chain cytokines
63c3pmdA_



not modelled 10.3 45 PDB header:lipid binding protein
Chain: A: PDB Molecule:conserved domain protein;
PDBTitle: crystal structure of the sporulation inhibitor pxo1-118 from bacillus2 anthracis
64c2r26C_



not modelled 10.2 26 PDB header:transferase
Chain: C: PDB Molecule:citrate synthase;
PDBTitle: the structure of the ternary complex of carboxymethyl2 coenzyme a and oxalateacetate with citrate synthase from3 the thermophilic archaeonthermoplasma acidophilum
65c2l1lB_



not modelled 10.1 19 PDB header:nuclear protein
Chain: B: PDB Molecule:exportin-1;
PDBTitle: nmr solution structure of the phi0 pki nes peptide in complex with2 crm1-rangtp
66c2qs7D_



not modelled 10.0 10 PDB header:oxidoreductase
Chain: D: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a putative oxidoreductase of the dsre/dsrf-like2 family (sso1126) from sulfolobus solfataricus p2 at 2.09 a resolution
67c1jc2A_



not modelled 10.0 19 PDB header:structural protein
Chain: A: PDB Molecule:troponin c, skeletal muscle;
PDBTitle: complex of the c-domain of troponin c with residues 1-40 of2 troponin i
68d1jc2a_



not modelled 10.0 19 Fold:EF Hand-like
Superfamily:EF-hand
Family:Calmodulin-like
69c3mzoA_



not modelled 9.9 14 PDB header:hydrolase
Chain: A: PDB Molecule:lin2634 protein;
PDBTitle: crystal structure of a hd-domain phosphohydrolase (lin2634) from2 listeria innocua at 1.98 a resolution
70c1rpqZ_



not modelled 9.8 38 PDB header:membrane protein
Chain: Z: PDB Molecule:peptide e131;
PDBTitle: high affinity ige receptor (alpha chain) complexed with tight-binding2 e131 'zeta' peptide from phage display
71c2kxeA_



not modelled 9.6 38 PDB header:transferase
Chain: A: PDB Molecule:dna polymerase ii small subunit;
PDBTitle: n-terminal domain of the dp1 subunit of an archaeal d-family dna2 polymerase
72d1ha7a_



not modelled 9.5 24 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
73c2paxA_



not modelled 9.4 26 PDB header:transferase
Chain: A: PDB Molecule:poly(adp-ribose) polymerase;
PDBTitle: the catalytic fragment of poly(adp-ribose) polymerase2 complexed with 4-amino-1,8-naphthalimide
74d1k3pa_



not modelled 9.4 21 Fold:Citrate synthase
Superfamily:Citrate synthase
Family:Citrate synthase
75c2vofA_



not modelled 9.4 38 PDB header:apoptosis
Chain: A: PDB Molecule:bcl-2-related protein a1;
PDBTitle: structure of mouse a1 bound to the puma bh3-domain
76d1jbob_



not modelled 9.4 22 Fold:Globin-like
Superfamily:Globin-like
Family:Phycocyanin-like phycobilisome proteins
77c3b21A_



not modelled 9.3 27 PDB header:unknown function
Chain: A: PDB Molecule:orf169b;
PDBTitle: crystal structure of ospi from shigella flexineri
78c2c9lZ_



not modelled 9.1 38 PDB header:viral protein
Chain: Z: PDB Molecule:bzlf1 trans-activator protein;
PDBTitle: structure of the epstein-barr virus zebra protein
79d2hkja2



not modelled 9.1 22 Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:DNA gyrase/MutL, second domain
80c1kcoA_



not modelled 9.1 38 PDB header:protein binding
Chain: A: PDB Molecule:e131 zeta peptide;
PDBTitle: structure of e131 zeta peptide, a potent antagonist of the2 high-affinity ige receptor
81c1ei3E_



not modelled 8.8 19 PDB header:
PDB COMPND:
82c2p7nA_



not modelled 8.7 13 PDB header:cell invasion
Chain: A: PDB Molecule:pathogenicity island 1 effector protein;
PDBTitle: crystal structure of the pathogenicity island 1 effector2 protein from chromobacterium violaceum. northeast3 structural genomics consortium (nesgc) target cvr69.
83c3gqqD_



not modelled 8.7 45 PDB header:splicing
Chain: D: PDB Molecule:protein unc-119 homolog a;
PDBTitle: crystal structure of the human retinal protein 4 (unc-1192 homolog a). northeast structural genomics consortium3 target hr3066a
84d1vp7a_



not modelled 8.7 21 Fold:Spectrin repeat-like
Superfamily:XseB-like
Family:XseB-like
85c2j96B_



not modelled 8.7 19 PDB header:photosynthesis
Chain: B: PDB Molecule:phycoerythrocyanin alpha chain;
PDBTitle: the e-configuration of alfa-phycoerythrocyanin
86d1jb0i_



not modelled 8.5 50 Fold:Single transmembrane helix
Superfamily:Subunit VIII of photosystem I reaction centre, PsaI
Family:Subunit VIII of photosystem I reaction centre, PsaI
87c3oqvA_



not modelled 8.5 30 PDB header:protein binding
Chain: A: PDB Molecule:albc;
PDBTitle: albc, a cyclodipeptide synthase from streptomyces noursei
88c3bvhE_



not modelled 8.5 39 PDB header:blood clotting
Chain: E: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of recombinant gammad364a fibrinogen fragment d with2 the peptide ligand gly-pro-arg-pro-amide
89c3oqhB_



not modelled 8.4 28 PDB header:ligase
Chain: B: PDB Molecule:putative uncharacterized protein yvmc;
PDBTitle: crystal structure of b. licheniformis cdps yvmc-blic
90c1rpqX_



not modelled 8.2 38 PDB header:membrane protein
Chain: X: PDB Molecule:peptide e131;
PDBTitle: high affinity ige receptor (alpha chain) complexed with tight-binding2 e131 'zeta' peptide from phage display
91d2apla1



not modelled 8.2 14 Fold:PG0816-like
Superfamily:PG0816-like
Family:PG0816-like
92d1vp7b_



not modelled 8.2 21 Fold:Spectrin repeat-like
Superfamily:XseB-like
Family:XseB-like
93c2pfcA_



not modelled 8.1 30 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein rv0098/mt0107;
PDBTitle: structure of mycobacterium tuberculosis rv0098
94c2wfuA_



not modelled 8.0 36 PDB header:signaling protein
Chain: A: PDB Molecule:probable insulin-like peptide 5 a chain;
PDBTitle: crystal structure of dilp5 variant db
95c2wfvA_



not modelled 8.0 36 PDB header:signaling protein
Chain: A: PDB Molecule:probable insulin-like peptide 5 a chain;
PDBTitle: crystal structure of dilp5 variant c4
96d1oqpa_



not modelled 7.9 9 Fold:EF Hand-like
Superfamily:EF-hand
Family:Calmodulin-like
97d1m1jb1



not modelled 7.9 34 Fold:Fibrinogen C-terminal domain-like
Superfamily:Fibrinogen C-terminal domain-like
Family:Fibrinogen C-terminal domain-like
98c2kjeB_



not modelled 7.9 35 PDB header:transcription
Chain: B: PDB Molecule:early e1a 32 kda protein;
PDBTitle: nmr structure of cbp taz2 and adenoviral e1a complex
99c1ykuB_



not modelled 7.8 36 PDB header:unknown function
Chain: B: PDB Molecule:hypothetical protein pxo2-61;
PDBTitle: crystal structure of a sensor domain homolog

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