Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ8IWZ3
DateFri May 25 10:00:52 BST 2012
Unique Job ID701be3fdd11c8e22

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c1n11A_
Top template information
PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker
Confidence and coverage
Confidence:100.0% Coverage: 16%
395 residues ( 16% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
519 residues ( 20%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MLTDSGGGGTSFEEDLDSVAPRSAPAGASEPPPPGGVGLGIRTVRLFGEAGPASGVGSSG
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   .........70.........80.........90.........100.........110.........120
Sequence  GGGSGSGTGGGDAALDFKLAAAVLRTGGGGGASGSDEDEVSEVESFILDQEDLDNPVLKT
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   .........130.........140.........150.........160.........170.........180
Sequence  TSEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVS
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   .........190.........200.........210.........220.........230.........240
Sequence  CALDEAAAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGES
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   .........250.........260.........270.........280.........290.........300
Sequence  LLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNS
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   .........310.........320.........330.........340.........350.........360
Sequence  QSATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDH
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   .........370.........380.........390.........400.........410.........420
Sequence  GAGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEV
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   .........430.........440.........450.........460.........470.........480
Sequence  ARLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAAR
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   .........490.........500.........510.........520.........530.........540
Sequence  EGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIELGCSTPLM
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   .........550.........560.........570.........580.........590.........600
Sequence  EASQEGHLELVKYLLASGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEG
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   .........610.........620.........630.........640.........650.........660
Sequence  GRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGAD
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   .........670.........680.........690.........700.........710.........720
Sequence  PTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPTTDVSQLPPPSQDQSQVPRVPT
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   .........730.........740.........750.........760.........770.........780
Sequence  HTLAMVVPPQEPDRTSQENSPALLGVQKGTSKQKSSSLQVADQDLLPSFHPYQPLECIVE
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   .........790.........800.........810.........820.........830.........840
Sequence  ETEGKLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQK
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   .........850.........860.........870.........880.........890.........900
Sequence  VERQLQMKTQQQFTKEYLETKGQKDTVSLHQQCSHRGVFPEGEGDGSLPEDHFSELPQVD
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   .........910.........920.........930.........940.........950.........960
Sequence  TILFKDNDVDDEQQSPPSAEQIDFVPVQPLSSPQCNFSSDLGSNGTNSLELQKVSGNQQI
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   .........970.........980.........990.........1000.........1010.........1020
Sequence  VGQPQIAITGHDQGLLVQEPDGLMVATPAQTLTDTLDDLIAAVSTRVPTGSNSSSQTTEC
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   .........1030.........1040.........1050.........1060.........1070.........1080
Sequence  LTPESCSQTTSNVASQSMPPVYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARDAK
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   .........1090.........1100.........1110.........1120.........1130.........1140
Sequence  IEHRDKKGFTPLILAATAGHVGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDL
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   .........1150.........1160.........1170.........1180.........1190.........1200
Sequence  LLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMN
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   .........1210.........1220.........1230.........1240.........1250.........1260
Sequence  GHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTP
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   .........1270.........1280.........1290.........1300.........1310.........1320
Sequence  LMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLIHRGAHIDV
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   .........1330.........1340.........1350.........1360.........1370.........1380
Sequence  RNKKGNTPLWLASNGGHFDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQYLVKE
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   .........1390.........1400.........1410.........1420.........1430.........1440
Sequence  VNQFPSDIECMRYIATITDKELLKKCHQCVETIVKAKDQQAAEANKNASILLKELDLEKS
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   .........1450.........1460.........1470.........1480.........1490.........1500
Sequence  REESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKENSELPEDEDEEENDEDVEQ
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?????




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   .........1510.........1520.........1530.........1540.........1550.........1560
Sequence  EVPIEPPSATTTTTIGISATSATFTNVFGKKRANVVTTPSTNRKNKKNKTKETPPTAHLI
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??
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?
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   .........1570.........1580.........1590.........1600.........1610.........1620
Sequence  LPEQHMSLAQQKADKNKINGEPRGGGAGGNSDSDNLDSTDCNSESSSGGKSQELNFVMDV
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??
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   .........1630.........1640.........1650.........1660.........1670.........1680
Sequence  NSSKYPSLLLHSQEEKTSTATSKTQTRLEGEVTPNSLSTSYKTVSLPLSSPNIKLNLTSP
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??????????????????????????????????
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   .........1690.........1700.........1710.........1720.........1730.........1740
Sequence  KRGQKREEGWKEVVRRSKKLSVPASVVSRIMGRGGCNITAIQDVTGAHIDVDKQKDKNGE
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??

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??
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   .........1750.........1760.........1770.........1780.........1790.........1800
Sequence  RMITIRGGTESTRYAVQLINALIQDPAKELEDLIPKNHIRTPASTKSIHANFSSGVGTTA
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   .........1810.........1820.........1830.........1840.........1850.........1860
Sequence  ASSKNAFPLGAPTLVTSQATTLSTFQPANKLNKNVPTNVRSSFPVSLPLAYPHPHFALLA
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   .........1870.........1880.........1890.........1900.........1910.........1920
Sequence  AQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGNTNSSPKHNNTSRLPNQNGTV
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   .........1930.........1940.........1950.........1960.........1970.........1980
Sequence  LPSESAGLATASCPITVSSVVAASQQLCVTNTRTPSSVRKQLFACVPKTSPPATVISSVT
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   .........1990.........2000.........2010.........2020.........2030.........2040
Sequence  STCSSLPSVSSAPITSGQAPTTFLPASTSQAQLSSQKMESFSAVPPTKEKVSTQDQPMAN
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   .........2050.........2060.........2070.........2080.........2090.........2100
Sequence  LCTPSSTANSCSSSASNTPGAPETHPSSSPTPTSSNTQEEAQPSSVSDLSPMSMPFASNS
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   .........2110.........2120.........2130.........2140.........2150.........2160
Sequence  EPAPLTLTSPRMVAADNQDTSNLPQLAVPAPRVSHRMQPRGSFYSMVPNATIHQDPQSIF
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   .........2170.........2180.........2190.........2200.........2210.........2220
Sequence  VTNPVTLTPPQGPPAAVQLSSAVNIMNGSQMHINPANKSLPPTFGPATLFNHFSSLFDSS
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?????
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   .........2230.........2240.........2250.........2260.........2270.........2280
Sequence  QVPANQGWGDGPLSSRVATDASFTVQSAFLGNSVLGHLENMHPDNSKAPGFRPPSQRVST
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   .........2290.........2300.........2310.........2320.........2330.........2340
Sequence  SPVGLPSIDPSGSSPSSSSAPLASFSGIPGTRVFLQGPAPVGTPSFNRQHFSPHPWTSAS
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   .........2350.........2360.........2370.........2380.........2390.........2400
Sequence  NSSTSAPPTLGQPKGVSASQDRKIPPPIGTERLARIRQGGSVAQAPAGTSFVAPVGHSGI
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   .........2410.........2420.........2430.........2440.........2450.........2460
Sequence  WSFGVNAVSEGLSGWSQSVMGNHPMHQQLSDPSTFSQHQPMERDDSGMVAPSNIFHQPMA
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   .........2470.........2480.........2490.........2500.........2510.........2520
Sequence  SGFVDFSKGLPISMYGGTIIPSHPQLADVPGGPLFNGLHNPDPAWNPMIKVIQNSTECTD
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   .........2530.........2540..
Sequence  AQQIWPGTWAPHIGNMHLKYVN
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1n11 chain A

3D model

Region: 273 - 670
Aligned: 395
Modelled: 395
Confidence: 100.0%
Identity: 32%
PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker

Phyre2

PDB 1n11 chain A

3D model

Region: 273 - 670
Aligned: 395
Modelled: 395
Confidence: 100.0%
Identity: 32%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3kea chain B

3D model

Region: 212 - 488
Aligned: 262
Modelled: 254
Confidence: 100.0%
Identity: 18%
PDB header:viral protein
Chain: B: PDB Molecule:k1l;
PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function

Phyre2

PDB 2aja chain A domain 1

3D model

Region: 215 - 492
Aligned: 276
Modelled: 271
Confidence: 100.0%
Identity: 17%
Fold: alpha-alpha superhelix
Superfamily: Pseudo ankyrin repeat-like
Family: Pseudo ankyrin repeat

Phyre2

PDB 1s70 chain B

3D model

Region: 211 - 499
Aligned: 277
Modelled: 277
Confidence: 100.0%
Identity: 25%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3utm chain A

3D model

Region: 228 - 493
Aligned: 261
Modelled: 261
Confidence: 100.0%
Identity: 29%
PDB header:transferase/signaling protein
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of a mouse tankyrase-axin complex

Phyre2

PDB 3ljn chain A

3D model

Region: 234 - 598
Aligned: 297
Modelled: 286
Confidence: 100.0%
Identity: 19%
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: ankyrin repeat protein from leishmania major

Phyre2

PDB 2aja chain A

3D model

Region: 269 - 493
Aligned: 224
Modelled: 220
Confidence: 100.0%
Identity: 17%
PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21.

Phyre2

PDB 2fo1 chain E

3D model

Region: 228 - 492
Aligned: 263
Modelled: 251
Confidence: 100.0%
Identity: 23%
PDB header:gene regulation/signalling protein/dna
Chain: E: PDB Molecule:lin-12 protein;
PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna

Phyre2

PDB 2fo1 chain E domain 1

3D model

Region: 239 - 491
Aligned: 251
Modelled: 240
Confidence: 100.0%
Identity: 23%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 1wdy chain A

3D model

Region: 237 - 501
Aligned: 265
Modelled: 265
Confidence: 100.0%
Identity: 30%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 2xai chain D

3D model

Region: 272 - 527
Aligned: 250
Modelled: 250
Confidence: 100.0%
Identity: 27%
PDB header:transcription
Chain: D: PDB Molecule:ankyrin repeat and socs box protein 9;
PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc

Phyre2

PDB 1sw6 chain A

3D model

Region: 241 - 446
Aligned: 204
Modelled: 204
Confidence: 100.0%
Identity: 15%
PDB header:transcription regulation
Chain: A: PDB Molecule:regulatory protein swi6;
PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment

Phyre2

PDB 1sw6 chain A

3D model

Region: 241 - 446
Aligned: 204
Modelled: 204
Confidence: 100.0%
Identity: 15%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 1uoh chain A

3D model

Region: 270 - 492
Aligned: 220
Modelled: 220
Confidence: 100.0%
Identity: 30%
Fold: beta-hairpin-alpha-hairpin repeat
Superfamily: Ankyrin repeat
Family: Ankyrin repeat

Phyre2

PDB 3b7b chain B

3D model

Region: 274 - 496
Aligned: 223
Modelled: 223
Confidence: 100.0%
Identity: 27%
PDB header:transferase
Chain: B: PDB Molecule:euchromatic histone-lysine n-methyltransferase 1;
PDBTitle: euhmt1 (glp) ankyrin repeat domain (structure 1)

Phyre2

PDB 3jxi chain A

3D model

Region: 205 - 427
Aligned: 204
Modelled: 204
Confidence: 100.0%
Identity: 22%
PDB header:membrane protein
Chain: A: PDB Molecule:vanilloid receptor-related osmotically activated channel
PDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain

Phyre2

PDB 2f8x chain K

3D model

Region: 274 - 495
Aligned: 217
Modelled: 217
Confidence: 100.0%
Identity: 30%
PDB header:transcription/dna
Chain: K: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: crystal structure of activated notch, csl and maml on hes-12 promoter dna sequence

Phyre2

PDB 1ycs chain B

3D model

Region: 209 - 384
Aligned: 173
Modelled: 173
Confidence: 100.0%
Identity: 19%
PDB header:complex (anti-oncogene/ankyrin repeats)
Chain: B: PDB Molecule:53bp2;
PDBTitle: p53-53bp2 complex

Phyre2

PDB 3eu9 chain B

3D model

Region: 234 - 459
Aligned: 225
Modelled: 225
Confidence: 100.0%
Identity: 24%
PDB header:protein binding, methyl-lysine-binding p
Chain: B: PDB Molecule:huntingtin-interacting protein 14;
PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14

Phyre2

PDB 3jue chain A

3D model

Region: 168 - 324
Aligned: 156
Modelled: 156
Confidence: 100.0%
Identity: 21%
PDB header:protein transport/endocytosis
Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of arfgap and ank repeat domain of acap1

Phyre2

PDB 2xum chain S

3D model

Region: 1339 - 1356
Aligned: 18
Modelled: 18
Confidence: 93.0%
Identity: 61%
PDB header:oxidoreductase/peptide
Chain: S: PDB Molecule:asp-substrate peptide 2;
PDBTitle: factor inhibiting hif (fih) q239h mutant in complex with zn(ii), nog2 and asp-substrate peptide (20-mer)

Phyre2
1

c1n11A_
2

d1n11a_
3

c3keaB_
4

d2ajaa1
5

d1s70b_
6

c3utmA_
7

c3ljnA_
8

c2ajaA_
9

c2fo1E_
10

d2fo1e1
11

d1wdya_
12

c2xaiD_
13

c1sw6A_
14

d1sw6a_
15

d1uoha_
16

c3b7bB_
17

c3jxiA_
18

c2f8xK_
19

c1ycsB_
20

c3eu9B_
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c3jueA_
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c2xumS_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1n11A_



100.0 32 PDB header:structural protein
Chain: A: PDB Molecule:ankyrin;
PDBTitle: d34 region of human ankyrin-r and linker
2d1n11a_



100.0 32 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
3c3keaB_



100.0 18 PDB header:viral protein
Chain: B: PDB Molecule:k1l;
PDBTitle: structure function studies of vaccinia virus host-range protein k12 reveal a novel ankyrin repeat interaction surface for k1s function
4d2ajaa1



100.0 17 Fold:alpha-alpha superhelix
Superfamily:Pseudo ankyrin repeat-like
Family:Pseudo ankyrin repeat
5d1s70b_



100.0 25 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
6c3utmA_



100.0 29 PDB header:transferase/signaling protein
Chain: A: PDB Molecule:tankyrase-1;
PDBTitle: crystal structure of a mouse tankyrase-axin complex
7c3ljnA_



100.0 19 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein;
PDBTitle: ankyrin repeat protein from leishmania major
8c2ajaA_



100.0 17 PDB header:protein binding
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: x-ray structure of an ankyrin repeat family protein q5zsv02 from legionella pneumophila. northeast structural genomics3 consortium target lgr21.
9c2fo1E_



100.0 23 PDB header:gene regulation/signalling protein/dna
Chain: E: PDB Molecule:lin-12 protein;
PDBTitle: crystal structure of the csl-notch-mastermind ternary2 complex bound to dna
10d2fo1e1



100.0 23 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
11d1wdya_



100.0 30 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
12c2xaiD_



100.0 27 PDB header:transcription
Chain: D: PDB Molecule:ankyrin repeat and socs box protein 9;
PDBTitle: crystal structure of ankyrin repeat and socs box-containing2 protein 9 (asb9) in complex with elonginb and elonginc
13c1sw6A_



100.0 15 PDB header:transcription regulation
Chain: A: PDB Molecule:regulatory protein swi6;
PDBTitle: s. cerevisiae swi6 ankyrin-repeat fragment
14d1sw6a_



100.0 15 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
15d1uoha_



100.0 30 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
16c3b7bB_



100.0 27 PDB header:transferase
Chain: B: PDB Molecule:euchromatic histone-lysine n-methyltransferase 1;
PDBTitle: euhmt1 (glp) ankyrin repeat domain (structure 1)
17c3jxiA_



100.0 22 PDB header:membrane protein
Chain: A: PDB Molecule:vanilloid receptor-related osmotically activated channel
PDBTitle: crystal structure of the chicken trpv4 ankyrin repeat domain
18c2f8xK_



100.0 30 PDB header:transcription/dna
Chain: K: PDB Molecule:neurogenic locus notch homolog protein 1;
PDBTitle: crystal structure of activated notch, csl and maml on hes-12 promoter dna sequence
19c1ycsB_



100.0 19 PDB header:complex (anti-oncogene/ankyrin repeats)
Chain: B: PDB Molecule:53bp2;
PDBTitle: p53-53bp2 complex
20c3eu9B_



100.0 24 PDB header:protein binding, methyl-lysine-binding p
Chain: B: PDB Molecule:huntingtin-interacting protein 14;
PDBTitle: the ankyrin repeat domain of huntingtin interacting protein 14
21d1k1aa_



not modelled 100.0 26 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
22c2f37B_



not modelled 100.0 23 PDB header:membrane protein
Chain: B: PDB Molecule:transient receptor potential cation channel
PDBTitle: crystal structure of the ankyrin repeat domain of human2 trpv2
23c3d9hA_



not modelled 100.0 28 PDB header:structural protein, protein binding
Chain: A: PDB Molecule:cdna flj77766, highly similar to homo sapiens
PDBTitle: crystal structure of the splice variant of human asb92 (hasb9-2), an ankyrin repeat protein
24c2vgeA_



not modelled 100.0 22 PDB header:transcription
Chain: A: PDB Molecule:rela-associated inhibitor;
PDBTitle: crystal structure of the c-terminal region of human iaspp
25d1ixva_



not modelled 100.0 21 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
26d1ot8a_



not modelled 100.0 29 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
27d1iknd_



not modelled 100.0 26 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
28c3t8kB_



not modelled 100.0 15 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: the crystal structure of a functionally unknown protein lebu_0176 from2 leptotrichia buccalis c-1013-b
29c3ui2A_



not modelled 100.0 21 PDB header:transport protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein, chloroplastic;
PDBTitle: crystal structure of the cpsrp54 tail bound to cpsrp43
30c3jueA_



100.0 21 PDB header:protein transport/endocytosis
Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of arfgap and ank repeat domain of acap1
31c1oy3D_



not modelled 100.0 30 PDB header:dna binding protein
Chain: D: PDB Molecule:transcription factor inhibitor i-kappa-b-beta;
PDBTitle: crystal structure of an ikbbeta/nf-kb p65 homodimer complex
32d1oy3d_



not modelled 100.0 30 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
33c3ehrB_



not modelled 100.0 20 PDB header:signaling protein
Chain: B: PDB Molecule:osteoclast-stimulating factor 1;
PDBTitle: crystal structure of human osteoclast stimulating factor
34c2b0oF_



not modelled 100.0 20 PDB header:metal binding protein
Chain: F: PDB Molecule:uplc1;
PDBTitle: crystal structure of uplc1 gap domain
35c2rfaA_



not modelled 100.0 22 PDB header:membrane protein
Chain: A: PDB Molecule:transient receptor potential cation channel subfamily v
PDBTitle: crystal structure of the mouse trpv6 ankyrin repeat domain
36c3lvrE_



not modelled 100.0 23 PDB header:protein transport
Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain-
PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
37c3hraA_



not modelled 100.0 24 PDB header:structural protein
Chain: A: PDB Molecule:ankyrin repeat family protein;
PDBTitle: crystal structure of ef0377 an ankyrin repeat protein
38c2nyjA_



not modelled 100.0 27 PDB header:transport protein
Chain: A: PDB Molecule:transient receptor potential cation channel
PDBTitle: crystal structure of the ankyrin repeat domain of trpv1
39c2kbxA_



not modelled 100.0 24 PDB header:cell adhesion
Chain: A: PDB Molecule:integrin-linked protein kinase;
PDBTitle: solution structure of ilk-pinch complex
40d1dcqa1



not modelled 100.0 23 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
41c1dcqA_



not modelled 100.0 21 PDB header:metal binding protein
Chain: A: PDB Molecule:pyk2-associated protein beta;
PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta.
42c3deoA_



not modelled 100.0 25 PDB header:protein transport, membrane protein
Chain: A: PDB Molecule:signal recognition particle 43 kda protein;
PDBTitle: structural basis for specific substrate recognition by the2 chloroplast signal recognition particle protein cpsrp43
43d1ycsb1



not modelled 99.9 27 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
44c2rfmB_



not modelled 99.9 28 PDB header:protein binding
Chain: B: PDB Molecule:putative ankyrin repeat protein tv1425;
PDBTitle: structure of a thermophilic ankyrin repeat protein
45c1ympB_



not modelled 99.9 24 PDB header:transcription
Chain: B: PDB Molecule:notch 1 protein;
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
46c1ympA_



not modelled 99.9 24 PDB header:transcription
Chain: A: PDB Molecule:notch 1 protein;
PDBTitle: the crystal structure of a partial mouse notch-1 ankyrin2 domain: repeats 4 through 7 preserve an ankyrin fold
47d2a5ea_



not modelled 99.9 22 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
48c3twtD_



not modelled 99.9 30 PDB header:signaling protein/peptide
Chain: D: PDB Molecule:tankyrase-2;
PDBTitle: crystal structure of arc4 from human tankyrase 2 in complex with2 peptide from human mcl1 (chimeric peptide)
49c3v30A_



not modelled 99.9 32 PDB header:protein binding
Chain: A: PDB Molecule:dna-binding protein rfxank;
PDBTitle: crystal structure of the peptide bound complex of the ankyrin repeat2 domains of human rfxank
50d1blxb_



not modelled 99.9 25 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
51c2v5qC_



not modelled 99.9 40 PDB header:transferase
Chain: C: PDB Molecule:design ankyrin repeat protein;
PDBTitle: crystal structure of wild-type plk-1 kinase domain in2 complex with a selective darpin
52c3c5rB_



not modelled 99.9 31 PDB header:protein binding
Chain: B: PDB Molecule:brca1-associated ring domain protein 1;
PDBTitle: crystal structure of the bard1 ankyrin repeat domain and its2 functional consequences
53c2zgdA_



not modelled 99.9 32 PDB header:de novo protein
Chain: A: PDB Molecule:3 repeat synthetic ankyrin;
PDBTitle: asn-hydroxylation stabilises the ankyrin repeat domain fold
54d1awcb_



not modelled 99.9 26 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
55d1myoa_



not modelled 99.9 26 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
56d1ihba_



not modelled 99.9 27 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
57c2jabC_



not modelled 99.9 32 PDB header:de novo protein
Chain: C: PDB Molecule:h10-2-g3;
PDBTitle: a designed ankyrin repeat protein evolved to picomolar2 affinity to her2
58d1bi7b_



not modelled 99.9 27 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
59c2l6bA_



not modelled 99.9 37 PDB header:de novo protein
Chain: A: PDB Molecule:nr1c;
PDBTitle: nrc consensus ankyrin repeat protein solution structure
60d1bd8a_



not modelled 99.9 25 Fold:beta-hairpin-alpha-hairpin repeat
Superfamily:Ankyrin repeat
Family:Ankyrin repeat
61c2xenA_



not modelled 99.9 30 PDB header:de novo protein
Chain: A: PDB Molecule:ni1c mut4;
PDBTitle: structural determinants for improved thermal stability of2 designed ankyrin repeat proteins with a redesigned c-3 capping module.
62c1n0qB_



not modelled 99.9 40 PDB header:structural protein
Chain: B: PDB Molecule:3 ankyrin repeats;
PDBTitle: 3ank: a designed ankyrin repeat protein with three identical consensus2 repeats
63c1n0rA_



not modelled 99.8 42 PDB header:structural protein
Chain: A: PDB Molecule:4 ankyrin repeats;
PDBTitle: 4ank: a designed ankyrin repeat protein with four identical2 consensus repeats
64c3zrhA_



not modelled 93.4 22 PDB header:hydrolase
Chain: A: PDB Molecule:ubiquitin thioesterase zranb1;
PDBTitle: crystal structure of the lys29, lys33-linkage-specific trabid otu2 deubiquitinase domain reveals an ankyrin-repeat ubiquitin binding3 domain (ankubd)
65c2xumS_



93.0 61 PDB header:oxidoreductase/peptide
Chain: S: PDB Molecule:asp-substrate peptide 2;
PDBTitle: factor inhibiting hif (fih) q239h mutant in complex with zn(ii), nog2 and asp-substrate peptide (20-mer)
66c3ih9A_



not modelled 81.4 16 PDB header:hydrolase
Chain: A: PDB Molecule:salt-tolerant glutaminase;
PDBTitle: crystal structure analysis of mglu in its tris form
67c2y0iS_



not modelled 61.1 67 PDB header:oxidoreductase/peptide
Chain: S: PDB Molecule:tankyrase-2;
PDBTitle: factor inhibiting hif-1 alpha in complex with tankyrase-2 (tnks2)2 fragment peptide (21-mer)
68c3mkqB_



not modelled 61.0 17 PDB header:transport protein
Chain: B: PDB Molecule:coatomer subunit alpha;
PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat
69d1kx5c_



not modelled 57.4 23 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
70d1eqza_



not modelled 54.3 23 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
71d1id3c_



not modelled 53.9 26 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
72d1kx3c_



not modelled 46.6 23 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
73d1u35c1



not modelled 42.3 19 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
74c2f8nK_



not modelled 37.6 23 PDB header:structural protein/dna
Chain: K: PDB Molecule:histone h2a type 1;
PDBTitle: 2.9 angstrom x-ray structure of hybrid macroh2a nucleosomes
75d1aoic_



not modelled 34.3 23 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
76d1tzya_



not modelled 29.5 23 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
77d1h6pa_



not modelled 16.3 21 Fold:Telomeric repeat binding factor (TRF) dimerisation domain
Superfamily:Telomeric repeat binding factor (TRF) dimerisation domain
Family:Telomeric repeat binding factor (TRF) dimerisation domain
78c3ix1A_



not modelled 15.6 22 PDB header:biosynthetic protein
Chain: A: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
79c3ix1B_



not modelled 15.6 22 PDB header:biosynthetic protein
Chain: B: PDB Molecule:n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding
PDBTitle: periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding2 protein from bacillus halodurans
80c3r6uA_



not modelled 13.7 19 PDB header:transport protein
Chain: A: PDB Molecule:choline-binding protein;
PDBTitle: crystal structure of choline binding protein opubc from bacillus2 subtilis
81d1r9la_



not modelled 12.3 20 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
82d2c4ba1



not modelled 11.6 14 Fold:Microbial ribonucleases
Superfamily:Microbial ribonucleases
Family:Bacterial ribonucleases
83d1goua_



not modelled 11.4 14 Fold:Microbial ribonucleases
Superfamily:Microbial ribonucleases
Family:Bacterial ribonucleases
84d2gy9p1



not modelled 11.1 15 Fold:Ribosomal protein S16
Superfamily:Ribosomal protein S16
Family:Ribosomal protein S16
85d1hioa_



not modelled 11.0 20 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
86c2dcpA_



not modelled 10.5 9 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein (rafl09-17-b18);
PDBTitle: fully automated nmr structure determination of the enth-vhs2 domain at3g16270 from arabidopsis thaliana
87d1sw5a_



not modelled 10.3 14 Fold:Periplasmic binding protein-like II
Superfamily:Periplasmic binding protein-like II
Family:Phosphate binding protein-like
88c3tqwA_



not modelled 9.9 15 PDB header:transport protein
Chain: A: PDB Molecule:methionine-binding protein;
PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii
89d1mv8a3



not modelled 9.8 17 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Family:UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
90c3sviA_



not modelled 9.6 23 PDB header:signaling protein
Chain: A: PDB Molecule:type iii effector hopab2;
PDBTitle: structure of the pto-binding domain of hoppmal generated by limited2 thermolysin digestion
91c3cr8C_



not modelled 9.4 18 PDB header:transferase
Chain: C: PDB Molecule:sulfate adenylyltranferase, adenylylsulfate
PDBTitle: hexameric aps kinase from thiobacillus denitrificans
92d2uubp1



not modelled 9.2 38 Fold:Ribosomal protein S16
Superfamily:Ribosomal protein S16
Family:Ribosomal protein S16
93c2jssA_



not modelled 9.0 15 PDB header:chaperone/nuclear protein
Chain: A: PDB Molecule:chimera of histone h2b.1 and histone h2a.z;
PDBTitle: nmr structure of chaperone chz1 complexed with histone2 h2a.z-h2b
94d3bula1



not modelled 9.0 14 Fold:Methionine synthase domain-like
Superfamily:Methionine synthase domain
Family:Methionine synthase domain
95c3hgkE_



not modelled 9.0 21 PDB header:transferase
Chain: E: PDB Molecule:effector protein hopab2;
PDBTitle: crystal structure of effect protein avrptob complexed with2 kinase pto
96d1d4ba_



not modelled 8.2 16 Fold:beta-Grasp (ubiquitin-like)
Superfamily:CAD & PB1 domains
Family:CAD domain
97c1l7cA_



not modelled 8.0 14 PDB header:cell adhesion
Chain: A: PDB Molecule:alpha e-catenin;
PDBTitle: alpha-catenin fragment, residues 385-651
98d2rcda1



not modelled 7.6 15 Fold:Cystatin-like
Superfamily:NTF2-like
Family:BxeB1374-like
99d2hoea1



not modelled 7.6 23 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ROK associated domain

Binding site prediction 

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