1 c2k7nA_
82.4
88
PDB header: isomeraseChain: A: PDB Molecule: peptidyl-prolyl cis-trans isomerase-like 1;
PDBTitle: solution structure of the ppil1 bound to a fragment of skip
2 c1y4cA_
65.1
7
PDB header: de novo proteinChain: A: PDB Molecule: maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp
3 d2rh3a1
21.6
35
Fold: Ribbon-helix-helixSuperfamily: Ribbon-helix-helixFamily: VirC2-like
4 c1dzlA_
20.5
22
PDB header: virusChain: A: PDB Molecule: late major capsid protein l1;
PDBTitle: l1 protein of human papillomavirus 16
5 d1dzla_
20.5
22
Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins)Superfamily: Group I dsDNA virusesFamily: Papovaviridae-like VP
6 c2otdC_
19.0
21
PDB header: hydrolaseChain: C: PDB Molecule: glycerophosphodiester phosphodiesterase;
PDBTitle: the crystal structure of the glycerophosphodiester phosphodiesterase2 from shigella flexneri 2a
7 d1u07a_
18.5
19
Fold: TolA/TonB C-terminal domainSuperfamily: TolA/TonB C-terminal domainFamily: TonB
8 d1t44g_
17.4
24
Fold: Gelsolin-likeSuperfamily: Actin depolymerizing proteinsFamily: Gelsolin-like
9 c3fldA_
16.7
14
PDB header: hydrolaseChain: A: PDB Molecule: protein trai;
PDBTitle: crystal structure of the trai c-terminal domain
10 d1o9ga_
16.6
29
Fold: S-adenosyl-L-methionine-dependent methyltransferasesSuperfamily: S-adenosyl-L-methionine-dependent methyltransferasesFamily: rRNA methyltransferase AviRa
11 c3qvqB_
16.5
17
PDB header: hydrolaseChain: B: PDB Molecule: phosphodiesterase olei02445;
PDBTitle: the structure of an oleispira antarctica phosphodiesterase olei024452 in complex with the product sn-glycerol-3-phosphate
12 d2gskb1
15.2
19
Fold: TolA/TonB C-terminal domainSuperfamily: TolA/TonB C-terminal domainFamily: TonB
13 d1d4oa_
14.9
17
Fold: DHS-like NAD/FAD-binding domainSuperfamily: DHS-like NAD/FAD-binding domainFamily: Transhydrogenase domain III (dIII)
14 d2z0da1
14.8
10
Fold: Cysteine proteinasesSuperfamily: Cysteine proteinasesFamily: Autophagin-like
15 d1pnoa_
14.7
23
Fold: DHS-like NAD/FAD-binding domainSuperfamily: DHS-like NAD/FAD-binding domainFamily: Transhydrogenase domain III (dIII)
16 c2k98A_
14.6
50
PDB header: antimicrobial proteinChain: A: PDB Molecule: msi-594;
PDBTitle: helical hairpin structure of potent antimicrobial peptide2 msi-594 in the presence of lipopolysaccharide micelle
17 c1pt9B_
14.4
17
PDB header: oxidoreductaseChain: B: PDB Molecule: nad(p) transhydrogenase, mitochondrial;
PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue
18 d1f7ua3
14.4
19
Fold: RRF/tRNA synthetase additional domain-likeSuperfamily: Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domainFamily: Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
19 c2zv4O_
14.0
9
PDB header: structural proteinChain: O: PDB Molecule: major vault protein;
PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution
20 c2bruC_
13.9
20
PDB header: oxidoreductaseChain: C: PDB Molecule: nad(p) transhydrogenase subunit beta;
PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase
21 d1g8fa3
not modelled
13.9
17
Fold: P-loop containing nucleoside triphosphate hydrolasesSuperfamily: P-loop containing nucleoside triphosphate hydrolasesFamily: ATP sulfurylase C-terminal domain
22 d1u6ra1
not modelled
13.2
28
Fold: Guanido kinase N-terminal domainSuperfamily: Guanido kinase N-terminal domainFamily: Guanido kinase N-terminal domain
23 d3c96a2
not modelled
13.0
7
Fold: FAD-linked reductases, C-terminal domainSuperfamily: FAD-linked reductases, C-terminal domainFamily: PHBH-like
24 d1e9ga_
not modelled
12.8
22
Fold: OB-foldSuperfamily: Inorganic pyrophosphataseFamily: Inorganic pyrophosphatase
25 c2giaB_
not modelled
12.7
33
PDB header: translationChain: B: PDB Molecule: mitochondrial rna-binding protein 1;
PDBTitle: crystal structures of trypanosoma bruciei mrp1/mrp2
26 d2giab1
not modelled
12.7
33
Fold: ssDNA-binding transcriptional regulator domainSuperfamily: ssDNA-binding transcriptional regulator domainFamily: Guide RNA binding protein gBP
27 d2p82a1
not modelled
12.3
10
Fold: Cysteine proteinasesSuperfamily: Cysteine proteinasesFamily: Autophagin-like
28 c1xx3A_
not modelled
11.6
19
PDB header: transport proteinChain: A: PDB Molecule: tonb protein;
PDBTitle: solution structure of escherichia coli tonb-ctd
29 d1qh4a1
not modelled
11.6
29
Fold: Guanido kinase N-terminal domainSuperfamily: Guanido kinase N-terminal domainFamily: Guanido kinase N-terminal domain
30 d2cbia3
not modelled
10.8
18
Fold: Zincin-likeSuperfamily: beta-N-acetylhexosaminidase-like domainFamily: Hyaluronidase N-terminal domain-like
31 c2z9fC_
not modelled
10.6
36
PDB header: biosynthetic proteinChain: C: PDB Molecule: cellulose synthase operon protein d;
PDBTitle: crystal structure of axcesd protein from acetobacter xylinum
32 d2hg6a1
not modelled
10.5
48
Fold: PA1123-likeSuperfamily: PA1123-likeFamily: PA1123-like
33 c2cy7A_
not modelled
10.4
10
PDB header: hydrolaseChain: A: PDB Molecule: cysteine protease apg4b;
PDBTitle: the crystal structure of human atg4b
34 c2la3A_
not modelled
10.4
44
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;
PDBTitle: the nmr structure of the protein np_344798.1 reveals a cca-adding2 enzyme head domain
35 c2d0jD_
not modelled
10.2
38
PDB header: transferaseChain: D: PDB Molecule: galactosylgalactosylxylosylprotein 3-beta-
PDBTitle: crystal structure of human glcat-s apo form
36 c3jxfA_
not modelled
10.2
20
PDB header: cell adhesionChain: A: PDB Molecule: receptor-type tyrosine-protein phosphatase zeta;
PDBTitle: ca-like domain of human ptprz
37 d1qpma_
not modelled
10.0
35
Fold: Putative DNA-binding domainSuperfamily: Putative DNA-binding domainFamily: Excisionase-like
38 c3qf7D_
not modelled
9.9
45
PDB header: hydrolaseChain: D: PDB Molecule: mre11;
PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair
39 d1kapp2
not modelled
9.7
18
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Serralysin-like metalloprotease, catalytic (N-terminal) domain
40 d1enfa2
not modelled
9.7
19
Fold: beta-Grasp (ubiquitin-like)Superfamily: Superantigen toxins, C-terminal domainFamily: Superantigen toxins, C-terminal domain
41 d2d13a1
not modelled
9.5
30
Fold: Adenine nucleotide alpha hydrolase-likeSuperfamily: Adenine nucleotide alpha hydrolases-likeFamily: N-type ATP pyrophosphatases
42 c2grxC_
not modelled
9.5
18
PDB header: metal transportChain: C: PDB Molecule: protein tonb;
PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome
43 d1fjja_
not modelled
9.4
23
Fold: PEBP-likeSuperfamily: PEBP-likeFamily: Prokaryotic PEBP-like proteins
44 c2qqdG_
not modelled
9.2
22
PDB header: lyaseChain: G: PDB Molecule: pyruvoyl-dependent arginine decarboxylase (ec
PDBTitle: n47a mutant of pyruvoyl-dependent arginine decarboxylase2 from methanococcus jannashii
45 c2px9A_
not modelled
9.2
13
PDB header: protein bindingChain: A: PDB Molecule: sumo-activating enzyme subunit 2;
PDBTitle: the intrinsic affinity between e2 and the cys domain of e12 in ubiquitin-like modifications
46 c1p65A_
not modelled
9.0
57
PDB header: viral proteinChain: A: PDB Molecule: nucleocapsid protein;
PDBTitle: crystal structure of the nucleocapsid protein of porcine reproductive2 and respiratory syndrome virus (prrsv)
47 d1p65a_
not modelled
9.0
57
Fold: Nucleocapsid protein dimerization domainSuperfamily: Nucleocapsid protein dimerization domainFamily: Arterivirus nucleocapsid protein
48 c2p76H_
not modelled
8.9
17
PDB header: hydrolaseChain: H: PDB Molecule: glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of a glycerophosphodiester phosphodiesterase from2 staphylococcus aureus
49 d1v82a_
not modelled
8.9
38
Fold: Nucleotide-diphospho-sugar transferasesSuperfamily: Nucleotide-diphospho-sugar transferasesFamily: 1,3-glucuronyltransferase
50 d1znca_
not modelled
8.8
15
Fold: Carbonic anhydraseSuperfamily: Carbonic anhydraseFamily: Carbonic anhydrase
51 c2fwtA_
not modelled
8.8
44
PDB header: electron transportChain: A: PDB Molecule: dhc, diheme cytochrome c;
PDBTitle: crystal structure of dhc purified from rhodobacter2 sphaeroides
52 c3pstA_
not modelled
8.7
25
PDB header: nuclear proteinChain: A: PDB Molecule: protein doa1;
PDBTitle: crystal structure of pul and pfu(mutate) domain
53 c1xyr6_
not modelled
8.5
19
PDB header: virusChain: 6: PDB Molecule: genome polyprotein, coat protein vp3;PDB Fragment: residues 620-630
PDBTitle: poliovirus 135s cell entry intermediate
54 c2zihC_
not modelled
8.4
20
PDB header: protein transportChain: C: PDB Molecule: vacuolar protein sorting-associated protein 74;
PDBTitle: crystal structure of yeast vps74
55 c2k9kA_
not modelled
8.4
20
PDB header: metal transportChain: A: PDB Molecule: tonb2;
PDBTitle: molecular characterization of the tonb2 protein from vibrio2 anguillarum
56 c2ziiA_
not modelled
8.3
20
PDB header: protein transportChain: A: PDB Molecule: vacuolar protein sorting-associated protein 74;
PDBTitle: crystal structure of yeast vps74-n-term truncation variant
57 d1zcca1
not modelled
8.2
13
Fold: TIM beta/alpha-barrelSuperfamily: PLC-like phosphodiesterasesFamily: Glycerophosphoryl diester phosphodiesterase
58 d3cu0a1
not modelled
8.1
31
Fold: Nucleotide-diphospho-sugar transferasesSuperfamily: Nucleotide-diphospho-sugar transferasesFamily: 1,3-glucuronyltransferase
59 c1d9jA_
not modelled
8.1
55
PDB header: antimicrobial proteinChain: A: PDB Molecule: cecropin a-magainin 2 hybrid peptide;
PDBTitle: solution structure of cecropin a(1-8)-magainin 2(1-12)2 hybrid peptide
60 c1f0dA_
not modelled
8.1
55
PDB header: antimicrobial proteinChain: A: PDB Molecule: cecropin a-magainin 2 hybrid peptide;
PDBTitle: cecropin a(1-8)-magainin 2(1-12) in dodecylphosphocholine2 micelles
61 d1ru8a_
not modelled
8.0
25
Fold: Adenine nucleotide alpha hydrolase-likeSuperfamily: Adenine nucleotide alpha hydrolases-likeFamily: N-type ATP pyrophosphatases
62 c3f1f4_
not modelled
8.0
80
PDB header: ribosomeChain: 4: PDB Molecule: 50s ribosomal protein l31;
PDBTitle: crystal structure of a translation termination complex formed with2 release factor rf2. this file contains the 50s subunit of one 70s3 ribosome. the entire crystal structure contains two 70s ribosomes as4 described in remark 400.
63 c2wh44_
not modelled
8.0
80
PDB header: ribosomeChain: 4: PDB Molecule: 50s ribosomal protein l31;
PDBTitle: insights into translational termination from the structure2 of rf2 bound to the ribosome
64 c1d9oA_
not modelled
8.0
55
PDB header: membrane proteinChain: A: PDB Molecule: cecropin a(1-8)-magainin 2 hybrid peptide analogue;
PDBTitle: solution structure of cecropin a(1-8)-magainin 2(1-12) hybrid peptide2 analogue(p3)
65 c1f0hA_
not modelled
8.0
55
PDB header: antimicrobial proteinChain: A: PDB Molecule: cecropin a-magainin 2 hybrid peptide;
PDBTitle: cecropin a(1-8)-magainin 2(1-12) a2 in2 dodecylphosphocholine micelles
66 c3r1rB_
not modelled
7.9
13
PDB header: complex (oxidoreductase/peptide)Chain: B: PDB Molecule: ribonucleotide reductase r1 protein;
PDBTitle: ribonucleotide reductase r1 protein with amppnp occupying2 the activity site from escherichia coli
67 d3coxa2
not modelled
7.9
14
Fold: FAD-linked reductases, C-terminal domainSuperfamily: FAD-linked reductases, C-terminal domainFamily: GMC oxidoreductases
68 d1eu3a2
not modelled
7.9
19
Fold: beta-Grasp (ubiquitin-like)Superfamily: Superantigen toxins, C-terminal domainFamily: Superantigen toxins, C-terminal domain
69 c1d9pA_
not modelled
7.9
55
PDB header: membrane proteinChain: A: PDB Molecule: cecropin a(1-8)-magainin 2 hybrid peptide analogue;
PDBTitle: solution structure of cecropin a(1-8)-magainin 2(1-12) hybrid peptide2 analogue(p4)
70 d1fuxa_
not modelled
7.8
18
Fold: PEBP-likeSuperfamily: PEBP-likeFamily: Prokaryotic PEBP-like proteins
71 d1gg3a3
not modelled
7.8
86
Fold: beta-Grasp (ubiquitin-like)Superfamily: Ubiquitin-likeFamily: First domain of FERM
72 c2rf9D_
not modelled
7.8
50
PDB header: transferaseChain: D: PDB Molecule: erbb receptor feedback inhibitor 1;
PDBTitle: crystal structure of the complex between the egfr kinase2 domain and a mig6 peptide
73 c2cazF_
not modelled
7.8
38
PDB header: protein transportChain: F: PDB Molecule: protein srn2;
PDBTitle: escrt-i core
74 d1hs5a_
not modelled
7.7
41
Fold: p53 tetramerization domainSuperfamily: p53 tetramerization domainFamily: p53 tetramerization domain
75 c2hlsB_
not modelled
7.7
21
PDB header: oxidoreductaseChain: B: PDB Molecule: protein disulfide oxidoreductase;
PDBTitle: the crystal structure of a protein disulfide oxidoreductase from2 aeropyrum pernix k1
76 c3czvB_
not modelled
7.6
35
PDB header: lyaseChain: B: PDB Molecule: carbonic anhydrase 13;
PDBTitle: crystal structure of the human carbonic anhydrase xiii in complex with2 acetazolamide
77 c3ks6A_
not modelled
7.6
11
PDB header: hydrolaseChain: A: PDB Molecule: glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (17743486) from agrobacterium tumefaciens3 str. c58 (dupont) at 1.80 a resolution
78 d1ty0a2
not modelled
7.6
17
Fold: beta-Grasp (ubiquitin-like)Superfamily: Superantigen toxins, C-terminal domainFamily: Superantigen toxins, C-terminal domain
79 d1jsxa_
not modelled
7.6
26
Fold: S-adenosyl-L-methionine-dependent methyltransferasesSuperfamily: S-adenosyl-L-methionine-dependent methyltransferasesFamily: Glucose-inhibited division protein B (GidB)
80 c3iydD_
not modelled
7.5
19
PDB header: transcription/dnaChain: D: PDB Molecule: dna-directed rna polymerase subunit beta;
PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex
81 d2e9xc2
not modelled
7.5
27
Fold: GINS/PriA/YqbF domainSuperfamily: PriA/YqbF domainFamily: PSF3 N-terminal domain-like
82 d3saka_
not modelled
7.5
47
Fold: p53 tetramerization domainSuperfamily: p53 tetramerization domainFamily: p53 tetramerization domain
83 d1l7da2
not modelled
7.4
18
Fold: Flavodoxin-likeSuperfamily: Formate/glycerate dehydrogenase catalytic domain-likeFamily: L-alanine dehydrogenase-like
84 c2qc5A_
not modelled
7.4
17
PDB header: lyaseChain: A: PDB Molecule: streptogramin b lactonase;
PDBTitle: streptogramin b lyase structure
85 d1ef1a3
not modelled
7.3
57
Fold: beta-Grasp (ubiquitin-like)Superfamily: Ubiquitin-likeFamily: First domain of FERM
86 d1rj6a_
not modelled
7.3
22
Fold: Carbonic anhydraseSuperfamily: Carbonic anhydraseFamily: Carbonic anhydrase
87 d1r0va2
not modelled
7.3
18
Fold: Restriction endonuclease-likeSuperfamily: tRNA-intron endonuclease catalytic domain-likeFamily: tRNA-intron endonuclease catalytic domain-like
88 c2w2jA_
not modelled
7.3
26
PDB header: lyaseChain: A: PDB Molecule: carbonic anhydrase-related protein;
PDBTitle: crystal structure of the human carbonic anhydrase related2 protein viii
89 c3bpjD_
not modelled
7.2
30
PDB header: translationChain: D: PDB Molecule: eukaryotic translation initiation factor 3 subunit j;
PDBTitle: crystal structure of human translation initiation factor 3, subunit 12 alpha
90 d1lg4a_
not modelled
7.2
24
Fold: Prion-likeSuperfamily: Prion-likeFamily: Prion-like
91 c3jxgD_
not modelled
7.2
26
PDB header: cell adhesionChain: D: PDB Molecule: receptor-type tyrosine-protein phosphatase gamma;
PDBTitle: ca-like domain of mouse ptprg
92 d1vd6a1
not modelled
7.2
16
Fold: TIM beta/alpha-barrelSuperfamily: PLC-like phosphodiesterasesFamily: Glycerophosphoryl diester phosphodiesterase
93 c2j11D_
not modelled
7.1
47
PDB header: transcriptionChain: D: PDB Molecule: cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant y327s t329g q331g
94 c2pmzG_
not modelled
7.1
23
PDB header: translation, transferaseChain: G: PDB Molecule: dna-directed rna polymerase subunit a";
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
95 d1g2ba_
not modelled
7.1
29
Fold: SH3-like barrelSuperfamily: SH3-domainFamily: SH3-domain
96 d1hfca_
not modelled
7.0
20
Fold: Zincin-likeSuperfamily: Metalloproteases ("zincins"), catalytic domainFamily: Matrix metalloproteases, catalytic domain
97 d1h4ra3
not modelled
7.0
57
Fold: beta-Grasp (ubiquitin-like)Superfamily: Ubiquitin-likeFamily: First domain of FERM
98 c3g8aF_
not modelled
6.9
36
PDB header: transferaseChain: F: PDB Molecule: ribosomal rna small subunit methyltransferase g;
PDBTitle: t. thermophilus 16s rrna g527 methyltransferase in complex with adohcy2 in space group p61
99 d1ni2a3
not modelled
6.9
57
Fold: beta-Grasp (ubiquitin-like)Superfamily: Ubiquitin-likeFamily: First domain of FERM