Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ13573
DateTue Apr 3 15:06:53 BST 2012
Unique Job ID2f7abe0790a3db20

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2k7nA_
Top template information
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase-like 1;
PDBTitle: solution structure of the ppil1 bound to a fragment of skip
Confidence and coverage
Confidence: 82.4% Coverage: 4%
24 residues ( 4% of your sequence) have been modelled with 82.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
Warning: 59% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MALTSFLPAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGD
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Disorder  ???????


???????????????????????????????















???
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   .........70.........80.........90.........100.........110.........120
Sequence  GGAFPEIHVAQYPLDMGRKKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLV
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Disorder  ?













???????????????
?????

?

????????????????


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   .........130.........140.........150.........160.........170.........180
Sequence  PKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
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Disorder  ???????????
?
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????????????????????




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   .........190.........200.........210.........220.........230.........240
Sequence  PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
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Disorder 
???????????








?????
???????????????????

?
????????

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   .........250.........260.........270.........280.........290.........300
Sequence  EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
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??























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   .........310.........320.........330.........340.........350.........360
Sequence  AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
Secondary structure 




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???????????????








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   .........370.........380.........390.........400.........410.........420
Sequence  KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSNEVQYDQRLFNQSKGMDS
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??







???????????????????????????????????????
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   .........430.........440.........450.........460.........470.........480
Sequence  GFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFSG
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Disorder  ????????????
???
?????????????????????????


???????????????
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   .........490.........500.........510.........520.........530......
Sequence  SDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKKRRKE
Secondary structure 



































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Disorder  ?????????????
?













??????????????????





???
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2k7n chain A

3D model

Region: 56 - 79
Aligned: 24
Modelled: 24
Confidence: 82.4%
Identity: 88%
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase-like 1;
PDBTitle: solution structure of the ppil1 bound to a fragment of skip

Phyre2

PDB 1y4c chain A

3D model

Region: 285 - 390
Aligned: 106
Modelled: 106
Confidence: 65.1%
Identity: 7%
PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp

Phyre2

PDB 2rh3 chain A domain 1

3D model

Region: 448 - 501
Aligned: 54
Modelled: 54
Confidence: 21.6%
Identity: 35%
Fold: Ribbon-helix-helix
Superfamily: Ribbon-helix-helix
Family: VirC2-like

Phyre2

PDB 1dzl chain A

3D model

Region: 6 - 75
Aligned: 60
Modelled: 70
Confidence: 20.5%
Identity: 22%
PDB header:virus
Chain: A: PDB Molecule:late major capsid protein l1;
PDBTitle: l1 protein of human papillomavirus 16

Phyre2

PDB 1dzl chain A

3D model

Region: 6 - 75
Aligned: 60
Modelled: 70
Confidence: 20.5%
Identity: 22%
Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily: Group I dsDNA viruses
Family: Papovaviridae-like VP

Phyre2

PDB 2otd chain C

3D model

Region: 49 - 96
Aligned: 47
Modelled: 48
Confidence: 19.0%
Identity: 21%
PDB header:hydrolase
Chain: C: PDB Molecule:glycerophosphodiester phosphodiesterase;
PDBTitle: the crystal structure of the glycerophosphodiester phosphodiesterase2 from shigella flexneri 2a

Phyre2

PDB 1u07 chain A

3D model

Region: 70 - 96
Aligned: 27
Modelled: 27
Confidence: 18.5%
Identity: 19%
Fold: TolA/TonB C-terminal domain
Superfamily: TolA/TonB C-terminal domain
Family: TonB

Phyre2

PDB 1t44 chain G

3D model

Region: 405 - 433
Aligned: 29
Modelled: 29
Confidence: 17.4%
Identity: 24%
Fold: Gelsolin-like
Superfamily: Actin depolymerizing proteins
Family: Gelsolin-like

Phyre2

PDB 3fld chain A

3D model

Region: 64 - 122
Aligned: 58
Modelled: 59
Confidence: 16.7%
Identity: 14%
PDB header:hydrolase
Chain: A: PDB Molecule:protein trai;
PDBTitle: crystal structure of the trai c-terminal domain

Phyre2

PDB 1o9g chain A

3D model

Region: 42 - 58
Aligned: 17
Modelled: 17
Confidence: 16.6%
Identity: 29%
Fold: S-adenosyl-L-methionine-dependent methyltransferases
Superfamily: S-adenosyl-L-methionine-dependent methyltransferases
Family: rRNA methyltransferase AviRa

Phyre2

PDB 3qvq chain B

3D model

Region: 50 - 96
Aligned: 46
Modelled: 47
Confidence: 16.5%
Identity: 17%
PDB header:hydrolase
Chain: B: PDB Molecule:phosphodiesterase olei02445;
PDBTitle: the structure of an oleispira antarctica phosphodiesterase olei024452 in complex with the product sn-glycerol-3-phosphate

Phyre2

PDB 2gsk chain B domain 1

3D model

Region: 71 - 96
Aligned: 26
Modelled: 26
Confidence: 15.2%
Identity: 19%
Fold: TolA/TonB C-terminal domain
Superfamily: TolA/TonB C-terminal domain
Family: TonB

Phyre2

PDB 1d4o chain A

3D model

Region: 417 - 468
Aligned: 35
Modelled: 52
Confidence: 14.9%
Identity: 17%
Fold: DHS-like NAD/FAD-binding domain
Superfamily: DHS-like NAD/FAD-binding domain
Family: Transhydrogenase domain III (dIII)

Phyre2

PDB 2z0d chain A domain 1

3D model

Region: 498 - 519
Aligned: 20
Modelled: 22
Confidence: 14.8%
Identity: 10%
Fold: Cysteine proteinases
Superfamily: Cysteine proteinases
Family: Autophagin-like

Phyre2

PDB 1pno chain A

3D model

Region: 417 - 468
Aligned: 35
Modelled: 52
Confidence: 14.7%
Identity: 23%
Fold: DHS-like NAD/FAD-binding domain
Superfamily: DHS-like NAD/FAD-binding domain
Family: Transhydrogenase domain III (dIII)

Phyre2

PDB 2k98 chain A

3D model

Region: 500 - 513
Aligned: 14
Modelled: 14
Confidence: 14.6%
Identity: 50%
PDB header:antimicrobial protein
Chain: A: PDB Molecule:msi-594;
PDBTitle: helical hairpin structure of potent antimicrobial peptide2 msi-594 in the presence of lipopolysaccharide micelle

Phyre2

PDB 1pt9 chain B

3D model

Region: 417 - 468
Aligned: 35
Modelled: 52
Confidence: 14.4%
Identity: 17%
PDB header:oxidoreductase
Chain: B: PDB Molecule:nad(p) transhydrogenase, mitochondrial;
PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue

Phyre2

PDB 1f7u chain A domain 3

3D model

Region: 63 - 78
Aligned: 16
Modelled: 16
Confidence: 14.4%
Identity: 19%
Fold: RRF/tRNA synthetase additional domain-like
Superfamily: Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
Family: Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain

Phyre2

PDB 2zv4 chain O

3D model

Region: 285 - 387
Aligned: 103
Modelled: 103
Confidence: 14.0%
Identity: 9%
PDB header:structural protein
Chain: O: PDB Molecule:major vault protein;
PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution

Phyre2

PDB 2bru chain C

3D model

Region: 417 - 468
Aligned: 35
Modelled: 52
Confidence: 13.9%
Identity: 20%
PDB header:oxidoreductase
Chain: C: PDB Molecule:nad(p) transhydrogenase subunit beta;
PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase

Phyre2
1

c2k7nA_
2

c1y4cA_
3

d2rh3a1
4

c1dzlA_
5

d1dzla_
6

c2otdC_
7

d1u07a_
8

d1t44g_
9

c3fldA_
10

d1o9ga_
11

c3qvqB_
12

d2gskb1
13

d1d4oa_
14

d2z0da1
15

d1pnoa_
16

c2k98A_
17

c1pt9B_
18

d1f7ua3
19

c2zv4O_
20

c2bruC_
21



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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2k7nA_



82.4 88 PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase-like 1;
PDBTitle: solution structure of the ppil1 bound to a fragment of skip
2c1y4cA_



65.1 7 PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp
3d2rh3a1



21.6 35 Fold:Ribbon-helix-helix
Superfamily:Ribbon-helix-helix
Family:VirC2-like
4c1dzlA_



20.5 22 PDB header:virus
Chain: A: PDB Molecule:late major capsid protein l1;
PDBTitle: l1 protein of human papillomavirus 16
5d1dzla_



20.5 22 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:Group I dsDNA viruses
Family:Papovaviridae-like VP
6c2otdC_



19.0 21 PDB header:hydrolase
Chain: C: PDB Molecule:glycerophosphodiester phosphodiesterase;
PDBTitle: the crystal structure of the glycerophosphodiester phosphodiesterase2 from shigella flexneri 2a
7d1u07a_



18.5 19 Fold:TolA/TonB C-terminal domain
Superfamily:TolA/TonB C-terminal domain
Family:TonB
8d1t44g_



17.4 24 Fold:Gelsolin-like
Superfamily:Actin depolymerizing proteins
Family:Gelsolin-like
9c3fldA_



16.7 14 PDB header:hydrolase
Chain: A: PDB Molecule:protein trai;
PDBTitle: crystal structure of the trai c-terminal domain
10d1o9ga_



16.6 29 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:rRNA methyltransferase AviRa
11c3qvqB_



16.5 17 PDB header:hydrolase
Chain: B: PDB Molecule:phosphodiesterase olei02445;
PDBTitle: the structure of an oleispira antarctica phosphodiesterase olei024452 in complex with the product sn-glycerol-3-phosphate
12d2gskb1



15.2 19 Fold:TolA/TonB C-terminal domain
Superfamily:TolA/TonB C-terminal domain
Family:TonB
13d1d4oa_



14.9 17 Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Transhydrogenase domain III (dIII)
14d2z0da1



14.8 10 Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Autophagin-like
15d1pnoa_



14.7 23 Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:Transhydrogenase domain III (dIII)
16c2k98A_



14.6 50 PDB header:antimicrobial protein
Chain: A: PDB Molecule:msi-594;
PDBTitle: helical hairpin structure of potent antimicrobial peptide2 msi-594 in the presence of lipopolysaccharide micelle
17c1pt9B_



14.4 17 PDB header:oxidoreductase
Chain: B: PDB Molecule:nad(p) transhydrogenase, mitochondrial;
PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue
18d1f7ua3



14.4 19 Fold:RRF/tRNA synthetase additional domain-like
Superfamily:Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
Family:Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
19c2zv4O_



14.0 9 PDB header:structural protein
Chain: O: PDB Molecule:major vault protein;
PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution
20c2bruC_



13.9 20 PDB header:oxidoreductase
Chain: C: PDB Molecule:nad(p) transhydrogenase subunit beta;
PDBTitle: complex of the domain i and domain iii of escherichia coli2 transhydrogenase
21d1g8fa3



not modelled 13.9 17 Fold:P-loop containing nucleoside triphosphate hydrolases
Superfamily:P-loop containing nucleoside triphosphate hydrolases
Family:ATP sulfurylase C-terminal domain
22d1u6ra1



not modelled 13.2 28 Fold:Guanido kinase N-terminal domain
Superfamily:Guanido kinase N-terminal domain
Family:Guanido kinase N-terminal domain
23d3c96a2



not modelled 13.0 7 Fold:FAD-linked reductases, C-terminal domain
Superfamily:FAD-linked reductases, C-terminal domain
Family:PHBH-like
24d1e9ga_



not modelled 12.8 22 Fold:OB-fold
Superfamily:Inorganic pyrophosphatase
Family:Inorganic pyrophosphatase
25c2giaB_



not modelled 12.7 33 PDB header:translation
Chain: B: PDB Molecule:mitochondrial rna-binding protein 1;
PDBTitle: crystal structures of trypanosoma bruciei mrp1/mrp2
26d2giab1



not modelled 12.7 33 Fold:ssDNA-binding transcriptional regulator domain
Superfamily:ssDNA-binding transcriptional regulator domain
Family:Guide RNA binding protein gBP
27d2p82a1



not modelled 12.3 10 Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Autophagin-like
28c1xx3A_



not modelled 11.6 19 PDB header:transport protein
Chain: A: PDB Molecule:tonb protein;
PDBTitle: solution structure of escherichia coli tonb-ctd
29d1qh4a1



not modelled 11.6 29 Fold:Guanido kinase N-terminal domain
Superfamily:Guanido kinase N-terminal domain
Family:Guanido kinase N-terminal domain
30d2cbia3



not modelled 10.8 18 Fold:Zincin-like
Superfamily:beta-N-acetylhexosaminidase-like domain
Family:Hyaluronidase N-terminal domain-like
31c2z9fC_



not modelled 10.6 36 PDB header:biosynthetic protein
Chain: C: PDB Molecule:cellulose synthase operon protein d;
PDBTitle: crystal structure of axcesd protein from acetobacter xylinum
32d2hg6a1



not modelled 10.5 48 Fold:PA1123-like
Superfamily:PA1123-like
Family:PA1123-like
33c2cy7A_



not modelled 10.4 10 PDB header:hydrolase
Chain: A: PDB Molecule:cysteine protease apg4b;
PDBTitle: the crystal structure of human atg4b
34c2la3A_



not modelled 10.4 44 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the nmr structure of the protein np_344798.1 reveals a cca-adding2 enzyme head domain
35c2d0jD_



not modelled 10.2 38 PDB header:transferase
Chain: D: PDB Molecule:galactosylgalactosylxylosylprotein 3-beta-
PDBTitle: crystal structure of human glcat-s apo form
36c3jxfA_



not modelled 10.2 20 PDB header:cell adhesion
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase zeta;
PDBTitle: ca-like domain of human ptprz
37d1qpma_



not modelled 10.0 35 Fold:Putative DNA-binding domain
Superfamily:Putative DNA-binding domain
Family:Excisionase-like
38c3qf7D_



not modelled 9.9 45 PDB header:hydrolase
Chain: D: PDB Molecule:mre11;
PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair
39d1kapp2



not modelled 9.7 18 Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Serralysin-like metalloprotease, catalytic (N-terminal) domain
40d1enfa2



not modelled 9.7 19 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Superantigen toxins, C-terminal domain
Family:Superantigen toxins, C-terminal domain
41d2d13a1



not modelled 9.5 30 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
42c2grxC_



not modelled 9.5 18 PDB header:metal transport
Chain: C: PDB Molecule:protein tonb;
PDBTitle: crystal structure of tonb in complex with fhua, e. coli2 outer membrane receptor for ferrichrome
43d1fjja_



not modelled 9.4 23 Fold:PEBP-like
Superfamily:PEBP-like
Family:Prokaryotic PEBP-like proteins
44c2qqdG_



not modelled 9.2 22 PDB header:lyase
Chain: G: PDB Molecule:pyruvoyl-dependent arginine decarboxylase (ec
PDBTitle: n47a mutant of pyruvoyl-dependent arginine decarboxylase2 from methanococcus jannashii
45c2px9A_



not modelled 9.2 13 PDB header:protein binding
Chain: A: PDB Molecule:sumo-activating enzyme subunit 2;
PDBTitle: the intrinsic affinity between e2 and the cys domain of e12 in ubiquitin-like modifications
46c1p65A_



not modelled 9.0 57 PDB header:viral protein
Chain: A: PDB Molecule:nucleocapsid protein;
PDBTitle: crystal structure of the nucleocapsid protein of porcine reproductive2 and respiratory syndrome virus (prrsv)
47d1p65a_



not modelled 9.0 57 Fold:Nucleocapsid protein dimerization domain
Superfamily:Nucleocapsid protein dimerization domain
Family:Arterivirus nucleocapsid protein
48c2p76H_



not modelled 8.9 17 PDB header:hydrolase
Chain: H: PDB Molecule:glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of a glycerophosphodiester phosphodiesterase from2 staphylococcus aureus
49d1v82a_



not modelled 8.9 38 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:1,3-glucuronyltransferase
50d1znca_



not modelled 8.8 15 Fold:Carbonic anhydrase
Superfamily:Carbonic anhydrase
Family:Carbonic anhydrase
51c2fwtA_



not modelled 8.8 44 PDB header:electron transport
Chain: A: PDB Molecule:dhc, diheme cytochrome c;
PDBTitle: crystal structure of dhc purified from rhodobacter2 sphaeroides
52c3pstA_



not modelled 8.7 25 PDB header:nuclear protein
Chain: A: PDB Molecule:protein doa1;
PDBTitle: crystal structure of pul and pfu(mutate) domain
53c1xyr6_



not modelled 8.5 19 PDB header:virus
Chain: 6: PDB Molecule:genome polyprotein, coat protein vp3;
PDB Fragment:residues 620-630 PDBTitle: poliovirus 135s cell entry intermediate
54c2zihC_



not modelled 8.4 20 PDB header:protein transport
Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 74;
PDBTitle: crystal structure of yeast vps74
55c2k9kA_



not modelled 8.4 20 PDB header:metal transport
Chain: A: PDB Molecule:tonb2;
PDBTitle: molecular characterization of the tonb2 protein from vibrio2 anguillarum
56c2ziiA_



not modelled 8.3 20 PDB header:protein transport
Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 74;
PDBTitle: crystal structure of yeast vps74-n-term truncation variant
57d1zcca1



not modelled 8.2 13 Fold:TIM beta/alpha-barrel
Superfamily:PLC-like phosphodiesterases
Family:Glycerophosphoryl diester phosphodiesterase
58d3cu0a1



not modelled 8.1 31 Fold:Nucleotide-diphospho-sugar transferases
Superfamily:Nucleotide-diphospho-sugar transferases
Family:1,3-glucuronyltransferase
59c1d9jA_



not modelled 8.1 55 PDB header:antimicrobial protein
Chain: A: PDB Molecule:cecropin a-magainin 2 hybrid peptide;
PDBTitle: solution structure of cecropin a(1-8)-magainin 2(1-12)2 hybrid peptide
60c1f0dA_



not modelled 8.1 55 PDB header:antimicrobial protein
Chain: A: PDB Molecule:cecropin a-magainin 2 hybrid peptide;
PDBTitle: cecropin a(1-8)-magainin 2(1-12) in dodecylphosphocholine2 micelles
61d1ru8a_



not modelled 8.0 25 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:Adenine nucleotide alpha hydrolases-like
Family:N-type ATP pyrophosphatases
62c3f1f4_



not modelled 8.0 80 PDB header:ribosome
Chain: 4: PDB Molecule:50s ribosomal protein l31;
PDBTitle: crystal structure of a translation termination complex formed with2 release factor rf2. this file contains the 50s subunit of one 70s3 ribosome. the entire crystal structure contains two 70s ribosomes as4 described in remark 400.
63c2wh44_



not modelled 8.0 80 PDB header:ribosome
Chain: 4: PDB Molecule:50s ribosomal protein l31;
PDBTitle: insights into translational termination from the structure2 of rf2 bound to the ribosome
64c1d9oA_



not modelled 8.0 55 PDB header:membrane protein
Chain: A: PDB Molecule:cecropin a(1-8)-magainin 2 hybrid peptide analogue;
PDBTitle: solution structure of cecropin a(1-8)-magainin 2(1-12) hybrid peptide2 analogue(p3)
65c1f0hA_



not modelled 8.0 55 PDB header:antimicrobial protein
Chain: A: PDB Molecule:cecropin a-magainin 2 hybrid peptide;
PDBTitle: cecropin a(1-8)-magainin 2(1-12) a2 in2 dodecylphosphocholine micelles
66c3r1rB_



not modelled 7.9 13 PDB header:complex (oxidoreductase/peptide)
Chain: B: PDB Molecule:ribonucleotide reductase r1 protein;
PDBTitle: ribonucleotide reductase r1 protein with amppnp occupying2 the activity site from escherichia coli
67d3coxa2



not modelled 7.9 14 Fold:FAD-linked reductases, C-terminal domain
Superfamily:FAD-linked reductases, C-terminal domain
Family:GMC oxidoreductases
68d1eu3a2



not modelled 7.9 19 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Superantigen toxins, C-terminal domain
Family:Superantigen toxins, C-terminal domain
69c1d9pA_



not modelled 7.9 55 PDB header:membrane protein
Chain: A: PDB Molecule:cecropin a(1-8)-magainin 2 hybrid peptide analogue;
PDBTitle: solution structure of cecropin a(1-8)-magainin 2(1-12) hybrid peptide2 analogue(p4)
70d1fuxa_



not modelled 7.8 18 Fold:PEBP-like
Superfamily:PEBP-like
Family:Prokaryotic PEBP-like proteins
71d1gg3a3



not modelled 7.8 86 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:First domain of FERM
72c2rf9D_



not modelled 7.8 50 PDB header:transferase
Chain: D: PDB Molecule:erbb receptor feedback inhibitor 1;
PDBTitle: crystal structure of the complex between the egfr kinase2 domain and a mig6 peptide
73c2cazF_



not modelled 7.8 38 PDB header:protein transport
Chain: F: PDB Molecule:protein srn2;
PDBTitle: escrt-i core
74d1hs5a_



not modelled 7.7 41 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
75c2hlsB_



not modelled 7.7 21 PDB header:oxidoreductase
Chain: B: PDB Molecule:protein disulfide oxidoreductase;
PDBTitle: the crystal structure of a protein disulfide oxidoreductase from2 aeropyrum pernix k1
76c3czvB_



not modelled 7.6 35 PDB header:lyase
Chain: B: PDB Molecule:carbonic anhydrase 13;
PDBTitle: crystal structure of the human carbonic anhydrase xiii in complex with2 acetazolamide
77c3ks6A_



not modelled 7.6 11 PDB header:hydrolase
Chain: A: PDB Molecule:glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (17743486) from agrobacterium tumefaciens3 str. c58 (dupont) at 1.80 a resolution
78d1ty0a2



not modelled 7.6 17 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Superantigen toxins, C-terminal domain
Family:Superantigen toxins, C-terminal domain
79d1jsxa_



not modelled 7.6 26 Fold:S-adenosyl-L-methionine-dependent methyltransferases
Superfamily:S-adenosyl-L-methionine-dependent methyltransferases
Family:Glucose-inhibited division protein B (GidB)
80c3iydD_



not modelled 7.5 19 PDB header:transcription/dna
Chain: D: PDB Molecule:dna-directed rna polymerase subunit beta;
PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex
81d2e9xc2



not modelled 7.5 27 Fold:GINS/PriA/YqbF domain
Superfamily:PriA/YqbF domain
Family:PSF3 N-terminal domain-like
82d3saka_



not modelled 7.5 47 Fold:p53 tetramerization domain
Superfamily:p53 tetramerization domain
Family:p53 tetramerization domain
83d1l7da2



not modelled 7.4 18 Fold:Flavodoxin-like
Superfamily:Formate/glycerate dehydrogenase catalytic domain-like
Family:L-alanine dehydrogenase-like
84c2qc5A_



not modelled 7.4 17 PDB header:lyase
Chain: A: PDB Molecule:streptogramin b lactonase;
PDBTitle: streptogramin b lyase structure
85d1ef1a3



not modelled 7.3 57 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:First domain of FERM
86d1rj6a_



not modelled 7.3 22 Fold:Carbonic anhydrase
Superfamily:Carbonic anhydrase
Family:Carbonic anhydrase
87d1r0va2



not modelled 7.3 18 Fold:Restriction endonuclease-like
Superfamily:tRNA-intron endonuclease catalytic domain-like
Family:tRNA-intron endonuclease catalytic domain-like
88c2w2jA_



not modelled 7.3 26 PDB header:lyase
Chain: A: PDB Molecule:carbonic anhydrase-related protein;
PDBTitle: crystal structure of the human carbonic anhydrase related2 protein viii
89c3bpjD_



not modelled 7.2 30 PDB header:translation
Chain: D: PDB Molecule:eukaryotic translation initiation factor 3 subunit j;
PDBTitle: crystal structure of human translation initiation factor 3, subunit 12 alpha
90d1lg4a_



not modelled 7.2 24 Fold:Prion-like
Superfamily:Prion-like
Family:Prion-like
91c3jxgD_



not modelled 7.2 26 PDB header:cell adhesion
Chain: D: PDB Molecule:receptor-type tyrosine-protein phosphatase gamma;
PDBTitle: ca-like domain of mouse ptprg
92d1vd6a1



not modelled 7.2 16 Fold:TIM beta/alpha-barrel
Superfamily:PLC-like phosphodiesterases
Family:Glycerophosphoryl diester phosphodiesterase
93c2j11D_



not modelled 7.1 47 PDB header:transcription
Chain: D: PDB Molecule:cellular tumor antigen p53;
PDBTitle: p53 tetramerization domain mutant y327s t329g q331g
94c2pmzG_



not modelled 7.1 23 PDB header:translation, transferase
Chain: G: PDB Molecule:dna-directed rna polymerase subunit a";
PDBTitle: archaeal rna polymerase from sulfolobus solfataricus
95d1g2ba_



not modelled 7.1 29 Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
96d1hfca_



not modelled 7.0 20 Fold:Zincin-like
Superfamily:Metalloproteases ("zincins"), catalytic domain
Family:Matrix metalloproteases, catalytic domain
97d1h4ra3



not modelled 7.0 57 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:First domain of FERM
98c3g8aF_



not modelled 6.9 36 PDB header:transferase
Chain: F: PDB Molecule:ribosomal rna small subunit methyltransferase g;
PDBTitle: t. thermophilus 16s rrna g527 methyltransferase in complex with adohcy2 in space group p61
99d1ni2a3



not modelled 6.9 57 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:First domain of FERM

Binding site prediction 

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