Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionP56597
DateThu Apr 26 09:17:35 BST 2012
Unique Job ID1fd31c5614167232

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3ztqC_
Top template information
PDB header:transferase
Chain: C: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: hexagonal crystal form p61 of the aquifex aeolicus nucleoside2 diphosphate kinase
Confidence and coverage
Confidence:100.0% Coverage: 65%
137 residues ( 65% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
188 residues ( 89%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVE
Secondary structure 
SS confidence 
Disorder  ?????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  KYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTD
Secondary structure 
SS confidence 
Disorder 
???
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  DLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELCKQK
Secondary structure 
SS confidence 
Disorder 
??
?
Disorder confidence 
 
   .........190.........200.........210..
Sequence  PADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
Secondary structure 
SS confidence 
Disorder 
???????
???????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3ztq chain C

3D model

Region: 12 - 148
Aligned: 137
Modelled: 137
Confidence: 100.0%
Identity: 39%
PDB header:transferase
Chain: C: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: hexagonal crystal form p61 of the aquifex aeolicus nucleoside2 diphosphate kinase

Phyre2

PDB 1u8w chain A

3D model

Region: 12 - 164
Aligned: 147
Modelled: 153
Confidence: 100.0%
Identity: 28%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 3mpd chain A

3D model

Region: 12 - 149
Aligned: 135
Modelled: 138
Confidence: 100.0%
Identity: 25%
PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of nucleoside diphosphate kinase from2 encephalitozoon cuniculi, cubic form, apo

Phyre2

PDB 3bbb chain A domain 1

3D model

Region: 10 - 161
Aligned: 147
Modelled: 152
Confidence: 100.0%
Identity: 32%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1pku chain A domain 1

3D model

Region: 12 - 149
Aligned: 135
Modelled: 138
Confidence: 100.0%
Identity: 29%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1nhk chain L

3D model

Region: 12 - 152
Aligned: 138
Modelled: 141
Confidence: 100.0%
Identity: 32%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 2hur chain F

3D model

Region: 12 - 150
Aligned: 136
Modelled: 139
Confidence: 100.0%
Identity: 39%
PDB header:signaling protein,transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: escherichia coli nucleoside diphosphate kinase

Phyre2

PDB 3ngt chain J

3D model

Region: 13 - 160
Aligned: 145
Modelled: 148
Confidence: 100.0%
Identity: 32%
PDB header:transferase
Chain: J: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: structure of leishmania ndkb complexed with amp.

Phyre2

PDB 3q89 chain H

3D model

Region: 12 - 161
Aligned: 145
Modelled: 150
Confidence: 100.0%
Identity: 30%
PDB header:transferase
Chain: H: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of staphylococcus aureus nucleoside diphosphate2 kinase complexed with cdp

Phyre2

PDB 1xiq chain A

3D model

Region: 12 - 161
Aligned: 145
Modelled: 150
Confidence: 100.0%
Identity: 28%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1s57 chain A

3D model

Region: 10 - 161
Aligned: 147
Modelled: 152
Confidence: 100.0%
Identity: 29%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1ucn chain A

3D model

Region: 10 - 161
Aligned: 147
Modelled: 152
Confidence: 100.0%
Identity: 28%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 3js9 chain A

3D model

Region: 12 - 161
Aligned: 145
Modelled: 147
Confidence: 100.0%
Identity: 23%
PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase family protein;
PDBTitle: crystal structure of nucleoside diphosphate kinase family protein from2 babesia bovis

Phyre2

PDB 4dut chain A

3D model

Region: 12 - 150
Aligned: 136
Modelled: 139
Confidence: 100.0%
Identity: 35%
PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: the structure of nucleoside diphosphate kinase (ndk) from burkholderia2 thailandensis

Phyre2

PDB 1w7w chain A

3D model

Region: 10 - 160
Aligned: 148
Modelled: 151
Confidence: 100.0%
Identity: 27%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1ehw chain A

3D model

Region: 13 - 148
Aligned: 133
Modelled: 136
Confidence: 100.0%
Identity: 31%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1be4 chain A

3D model

Region: 10 - 161
Aligned: 147
Modelled: 152
Confidence: 100.0%
Identity: 29%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1hlw chain A

3D model

Region: 10 - 161
Aligned: 146
Modelled: 149
Confidence: 100.0%
Identity: 29%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 1nb2 chain A

3D model

Region: 13 - 160
Aligned: 145
Modelled: 148
Confidence: 100.0%
Identity: 28%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 2dya chain A domain 1

3D model

Region: 12 - 164
Aligned: 147
Modelled: 150
Confidence: 100.0%
Identity: 31%
Fold: Ferredoxin-like
Superfamily: Nucleoside diphosphate kinase, NDK
Family: Nucleoside diphosphate kinase, NDK

Phyre2

PDB 3g36 chain D

3D model

Region: 156 - 198
Aligned: 43
Modelled: 42
Confidence: 99.4%
Identity: 37%
PDB header:nuclear protein
Chain: D: PDB Molecule:protein dpy-30 homolog;
PDBTitle: crystal structure of the human dpy-30-like c-terminal domain

Phyre2
1
c3ztqC_
2
d1u8wa_
3
c3mpdA_
4
d3bbba1
5
d1pkua1
6
d1nhkl_
7
c2hurF_
8
c3ngtJ_
9
c3q89H_
10
d1xiqa_
11
d1s57a_
12
d1ucna_
13
c3js9A_
14
c4dutA_
15
d1w7wa_
16
d1ehwa_
17
d1be4a_
18
d1hlwa_
19
d1nb2a_
20
d2dyaa1
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
c3g36D_
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
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89
90
91
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98
99



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3ztqC_
100.0 39 PDB header:transferase
Chain: C: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: hexagonal crystal form p61 of the aquifex aeolicus nucleoside2 diphosphate kinase
2d1u8wa_
100.0 28 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
3c3mpdA_
100.0 25 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of nucleoside diphosphate kinase from2 encephalitozoon cuniculi, cubic form, apo
4d3bbba1
100.0 32 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
5d1pkua1
100.0 29 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
6d1nhkl_
100.0 32 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
7c2hurF_
100.0 39 PDB header:signaling protein,transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: escherichia coli nucleoside diphosphate kinase
8c3ngtJ_
100.0 32 PDB header:transferase
Chain: J: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: structure of leishmania ndkb complexed with amp.
9c3q89H_
100.0 30 PDB header:transferase
Chain: H: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of staphylococcus aureus nucleoside diphosphate2 kinase complexed with cdp
10d1xiqa_
100.0 28 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
11d1s57a_
100.0 29 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
12d1ucna_
100.0 28 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
13c3js9A_
100.0 23 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase family protein;
PDBTitle: crystal structure of nucleoside diphosphate kinase family protein from2 babesia bovis
14c4dutA_
100.0 35 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: the structure of nucleoside diphosphate kinase (ndk) from burkholderia2 thailandensis
15d1w7wa_
100.0 27 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
16d1ehwa_
100.0 31 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
17d1be4a_
100.0 29 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
18d1hlwa_
100.0 29 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
19d1nb2a_
100.0 28 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
20d2dyaa1
100.0 31 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
21c2vu5A_
not modelled 100.0 28 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of pndk from bacillus anthracis
22c4di6F_
not modelled 100.0 23 PDB header:transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of nucleoside-diphosphate kinase from borrelia2 burgdorferi
23d1k44a_
not modelled 100.0 36 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
24c1w7wF_
not modelled 100.0 27 PDB header:transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: structure and mutational analysis of a plant mitochondrial2 nucleoside diphosphate kinase: identification of residues3 involved in serine phosphorylation and oligomerization.
25d2az3a1
not modelled 100.0 29 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
26d1xqia1
not modelled 100.0 39 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
27d1zs6a1
not modelled 100.0 29 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
28d1wkja1
not modelled 100.0 32 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
29d1nsqa_
not modelled 100.0 30 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
30d2b8qa1
not modelled 100.0 29 Fold:Ferredoxin-like
Superfamily:Nucleoside diphosphate kinase, NDK
Family:Nucleoside diphosphate kinase, NDK
31c3b6bF_
not modelled 100.0 28 PDB header:transferase
Chain: F: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of acanthamoeba polyphaga mimivirus2 nucleoside diphosphate kinase complexed with dgdp
32c2az1B_
not modelled 100.0 28 PDB header:transferase
Chain: B: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: structure of a halophilic nucleoside diphosphate kinase2 from halobacterium salinarum
33c3b54A_
not modelled 100.0 28 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: saccharomyces cerevisiae nucleoside diphosphate kinase
34c3r9lA_
not modelled 100.0 35 PDB header:transferase
Chain: A: PDB Molecule:nucleoside diphosphate kinase;
PDBTitle: crystal structure of nucleoside diphosphate kinase from giardia2 lamblia featuring a disordered dinucleotide binding site
35c3g36D_
99.4 37 PDB header:nuclear protein
Chain: D: PDB Molecule:protein dpy-30 homolog;
PDBTitle: crystal structure of the human dpy-30-like c-terminal domain
36c2bx6A_
not modelled 98.1 21 PDB header:transduction protein
Chain: A: PDB Molecule:xrp2 protein;
PDBTitle: crystal structure of the human retinitis pigmentosa2 protein 2 (rp2)
37d2ezwa1
not modelled 93.9 26 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
38d2hwna1
not modelled 60.3 31 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
39d1r2aa_
not modelled 58.0 31 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
40c1y7pB_
not modelled 57.1 17 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:hypothetical protein af1403;
PDBTitle: 1.9 a crystal structure of a protein of unknown function2 af1403 from archaeoglobus fulgidus, probable metabolic3 regulator
41c3p04A_
not modelled 39.7 14 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized bcr;
PDBTitle: crystal structure of the bcr protein from corynebacterium glutamicum.2 northeast structural genomics consortium target cgr8
42c2rd5D_
not modelled 34.8 23 PDB header:protein binding
Chain: D: PDB Molecule:pii protein;
PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana
43d1ukxa_
not modelled 32.8 22 Fold:UBC-like
Superfamily:UBC-like
Family:RWD domain
44d2fgca1
not modelled 27.0 22 Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
45c3bqsB_
not modelled 25.3 10 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of an uncharacterized protein from2 listeria monocytogenes, trigonal form
46d2fi0a1
not modelled 17.1 12 Fold:SP0561-like
Superfamily:SP0561-like
Family:SP0561-like
47d1nfpa_
not modelled 16.2 8 Fold:TIM beta/alpha-barrel
Superfamily:Bacterial luciferase-like
Family:Non-fluorescent flavoprotein (luxF, FP390)
48c4dhdA_
not modelled 15.8 18 PDB header:transferase
Chain: A: PDB Molecule:polyprenyl synthetase;
PDBTitle: crystal structure of isoprenoid synthase a3msh1 (target efi-501992)2 from pyrobaculum calidifontis
49c2ebkA_
not modelled 15.4 21 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:rwd domain-containing protein 3;
PDBTitle: solution structure of the rwd domain of human rwd domain2 containing protein 3
50d1kvka2
not modelled 13.4 18 Fold:Ferredoxin-like
Superfamily:GHMP Kinase, C-terminal domain
Family:Mevalonate kinase
51d1d8ja_
not modelled 12.8 19 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:The central core domain of TFIIE beta
52d1ydla1
not modelled 12.3 11 Fold:TFB5-like
Superfamily:TFB5-like
Family:TFB5-like
53d1wdcc_
not modelled 12.2 27 Fold:EF Hand-like
Superfamily:EF-hand
Family:Calmodulin-like
54c2z62A_
not modelled 11.4 24 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 4, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tv3 hybrid of human tlr4 and hagfish vlrb.61
55c1yfdA_
not modelled 11.3 19 PDB header:oxidoreductase
Chain: A: PDB Molecule:ribonucleoside-diphosphate reductase 1 beta
PDBTitle: crystal structure of the y122h mutant of ribonucleotide2 reductase r2 protein from e. coli
56c2qnfB_
not modelled 10.8 23 PDB header:hydrolase/dna
Chain: B: PDB Molecule:recombination endonuclease vii;
PDBTitle: crystal structure of t4 endonuclease vii h43n mutant in2 complex with heteroduplex dna containing base mismatches
57c4a1qB_
not modelled 10.7 30 PDB header:viral protein
Chain: B: PDB Molecule:orf e73;
PDBTitle: solution structure of e73 protein from sulfolobus spindle-2 shaped virus ragged hills, a hyperthermophilic3 crenarchaeal virus from yellowstone national park
58c1go4F_
not modelled 9.8 23 PDB header:cell cycle
Chain: F: PDB Molecule:mad1 (mitotic arrest deficient)-like 1;
PDBTitle: crystal structure of mad1-mad2 reveals a conserved mad22 binding motif in mad1 and cdc20.
59d1whza_
not modelled 9.8 25 Fold:dsRBD-like
Superfamily:YcfA/nrd intein domain
Family:YcfA-like
60d2dawa1
not modelled 9.8 20 Fold:UBC-like
Superfamily:UBC-like
Family:RWD domain
61c3bq3A_
not modelled 9.3 13 PDB header:cell cycle, ligase
Chain: A: PDB Molecule:defective in cullin neddylation protein 1;
PDBTitle: crystal structure of s. cerevisiae dcn1
62d2f06a1
not modelled 9.2 10 Fold:Ferredoxin-like
Superfamily:ACT-like
Family:BT0572-like
63c2a3lA_
not modelled 9.2 25 PDB header:hydrolase
Chain: A: PDB Molecule:amp deaminase;
PDBTitle: x-ray structure of adenosine 5'-monophosphate deaminase from2 arabidopsis thaliana in complex with coformycin 5'-phosphate
64d2a3la1
not modelled 9.2 25 Fold:TIM beta/alpha-barrel
Superfamily:Metallo-dependent hydrolases
Family:Adenosine/AMP deaminase
65d1d02a_
not modelled 8.5 36 Fold:Restriction endonuclease-like
Superfamily:Restriction endonuclease-like
Family:Restriction endonuclease MunI
66d2f1fa2
not modelled 8.1 12 Fold:Ferredoxin-like
Superfamily:ACT-like
Family:IlvH-like
67c4dbgB_
not modelled 7.9 33 PDB header:ligase
Chain: B: PDB Molecule:ring finger protein 31;
PDBTitle: crystal structure of hoil-1l-ubl complexed with a hoip-uba derivative
68d1br1b_
not modelled 7.8 20 Fold:EF Hand-like
Superfamily:EF-hand
Family:Calmodulin-like
69d1bg6a2
not modelled 7.4 13 Fold:NAD(P)-binding Rossmann-fold domains
Superfamily:NAD(P)-binding Rossmann-fold domains
Family:6-phosphogluconate dehydrogenase-like, N-terminal domain
70c3dgpB_
not modelled 7.3 14 PDB header:transcription
Chain: B: PDB Molecule:rna polymerase ii transcription factor b subunit 5;
PDBTitle: crystal structure of the complex between tfb5 and the c-terminal2 domain of tfb2
71c2daeA_
not modelled 7.3 27 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:kiaa0733 protein;
PDBTitle: solution structure of the n-terminal cue domain in the2 human mitogen-activated protein kinase kinase kinase 73 interacting protein 2 (map3k7ip2)
72d1dzfa1
not modelled 7.3 14 Fold:Restriction endonuclease-like
Superfamily:Eukaryotic RPB5 N-terminal domain
Family:Eukaryotic RPB5 N-terminal domain
73c3zvrA_
not modelled 6.7 24 PDB header:hydrolase
Chain: A: PDB Molecule:dynamin-1;
PDBTitle: crystal structure of dynamin
74d2i5nh2
not modelled 6.3 33 Fold:Single transmembrane helix
Superfamily:Photosystem II reaction centre subunit H, transmembrane region
Family:Photosystem II reaction centre subunit H, transmembrane region
75d2nrqa1
not modelled 6.3 19 Fold:RL5-like
Superfamily:RL5-like
Family:SSO1042-like
76d2daya1
not modelled 6.2 18 Fold:UBC-like
Superfamily:UBC-like
Family:RWD domain
77c2yz0A_
not modelled 6.2 8 PDB header:transferase
Chain: A: PDB Molecule:serine/threonine-protein kinase gcn2;
PDBTitle: solution structure of rwd/gi domain of saccharomyces2 cerevisiae gcn2
78c3owpB_
not modelled 6.1 45 PDB header:transferase/transferase inhibitor
Chain: B: PDB Molecule:camp-dependent protein kinase inhibitor alpha;
PDBTitle: human camp-dependent protein kinase in complex with an inhibitor
79c3fjqI_
not modelled 6.1 45 PDB header:transferase
Chain: I: PDB Molecule:camp-dependent protein kinase inhibitor alpha;
PDBTitle: crystal structure of camp-dependent protein kinase catalytic2 subunit alpha in complex with peptide inhibitor pki alpha3 (6-25)
80c3pooB_
not modelled 6.1 45 PDB header:transferase/transferase inhibitor
Chain: B: PDB Molecule:camp-dependent protein kinase inhibitor alpha;
PDBTitle: human camp-dependent protein kinase in complex with an inhibitor
81c1svhB_
not modelled 6.1 45 PDB header:transferase
Chain: B: PDB Molecule:camp-dependent protein kinase inhibitor, alpha
PDBTitle: crystal structure of protein kinase a in complex with2 azepane derivative 8
82c3e8cJ_
not modelled 6.1 45 PDB header:transferase
Chain: J: PDB Molecule:camp-dependent protein kinase inhibitor peptide;
PDBTitle: crystal structures of the kinase domain of pka in complex with atp-2 competitive inhibitors
83c3p0mB_
not modelled 6.1 45 PDB header:transferase
Chain: B: PDB Molecule:camp-dependent protein kinase inhibitor alpha;
PDBTitle: human camp-dependent protein kinase in complex with an inhibitor
84c1sveB_
not modelled 6.1 45 PDB header:transferase
Chain: B: PDB Molecule:camp-dependent protein kinase inhibitor, alpha
PDBTitle: crystal structure of protein kinase a in complex with2 azepane derivative 1
85c1yg0A_
not modelled 6.0 25 PDB header:metal transport
Chain: A: PDB Molecule:cop associated protein;
PDBTitle: solution structure of apo-copp from helicobacter pylori
86d1g7sa3
not modelled 5.9 15 Fold:Initiation factor IF2/eIF5b, domain 3
Superfamily:Initiation factor IF2/eIF5b, domain 3
Family:Initiation factor IF2/eIF5b, domain 3
87c1kxfA_
not modelled 5.8 29 PDB header:viral protein
Chain: A: PDB Molecule:sindbis virus capsid protein;
PDBTitle: sindbis virus capsid, (wild-type) residues 1-264,2 tetragonal crystal form (form ii)
88c3odnA_
not modelled 5.7 25 PDB header:membrane protein
Chain: A: PDB Molecule:dally-like protein;
PDBTitle: the crystal structure of drosophila dally-like protein core domain
89d2nlya1
not modelled 5.7 16 Fold:7-stranded beta/alpha barrel
Superfamily:Glycoside hydrolase/deacetylase
Family:Divergent polysaccharide deacetylase
90d1ep5a_
not modelled 5.7 24 Fold:Trypsin-like serine proteases
Superfamily:Trypsin-like serine proteases
Family:Viral proteases
91d1ywxa1
not modelled 5.6 20 Fold:Ribosomal proteins S24e, L23 and L15e
Superfamily:Ribosomal proteins S24e, L23 and L15e
Family:Ribosomal protein S24e
92c2xecD_
not modelled 5.6 22 PDB header:isomerase
Chain: D: PDB Molecule:putative maleate isomerase;
PDBTitle: nocardia farcinica maleate cis-trans isomerase bound to2 tris
93d1ufza_
not modelled 5.6 11 Fold:RuvA C-terminal domain-like
Superfamily:HBS1-like domain
Family:HBS1-like domain
94c2yewG_
not modelled 5.4 29 PDB header:virus
Chain: G: PDB Molecule:capsid protein;
PDBTitle: modeling barmah forest virus structural proteins
95c3re1B_
not modelled 5.3 18 PDB header:lyase
Chain: B: PDB Molecule:uroporphyrinogen-iii synthetase;
PDBTitle: crystal structure of uroporphyrinogen iii synthase from pseudomonas2 syringae pv. tomato dc3000
96d1wgla_
not modelled 5.3 23 Fold:RuvA C-terminal domain-like
Superfamily:UBA-like
Family:CUE domain
97d2g7oa1
not modelled 5.3 23 Fold:TraM-like
Superfamily:TraM-like
Family:TraM-like
98c3ceuA_
not modelled 5.3 18 PDB header:transferase
Chain: A: PDB Molecule:thiamine phosphate pyrophosphorylase;
PDBTitle: crystal structure of thiamine phosphate pyrophosphorylase2 (bt_0647) from bacteroides thetaiotaomicron. northeast3 structural genomics consortium target btr268
99c3h2bB_
not modelled 5.2 15 PDB header:transferase
Chain: B: PDB Molecule:sam-dependent methyltransferase;
PDBTitle: crystal structure of the sam-dependent methyltransferase2 cg3271 from corynebacterium glutamicum in complex with s-3 adenosyl-l-homocysteine and pyrophosphate. northeast4 structural genomics consortium target cgr113a

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