Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA1KZ92
DateSat Jun 16 10:29:17 BST 2012
Unique Job ID818a75a12f16e0cb

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2gjmA_
Top template information
PDB header:oxidoreductase
Chain: A: PDB Molecule:lactoperoxidase;
PDBTitle: crystal structure of buffalo lactoperoxidase at 2.75a resolution
Confidence and coverage
Confidence:100.0% Coverage: 39%
572 residues ( 39% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
1157 residues ( 79%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MEPRLFCWTTLFLLAGWCLPGLPCPSRCLCFKSTVRCMHLMLDHIPQVPQQTTVLDLRFN
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   .........70.........80.........90.........100.........110.........120
Sequence  RIREIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALDKQTFKG
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   .........130.........140.........150.........160.........170.........180
Sequence  LISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKRLRLDSN
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   .........190.........200.........210.........220.........230.........240
Sequence  ALVCDCDLMWLGELLQGFAQHGHTQAAATCEYPRRLHGRAVASVTVEEFNCQSPRITFEP
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   .........250.........260.........270.........280.........290.........300
Sequence  QDVEVPSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDTRLNVFDDGTLMIRNTRESDQ
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   .........310.........320.........330.........340.........350.........360
Sequence  GVYQCMARNSAGEAKTQSAMLRYSSLPAKPSFVIQPQDTEVLIGTSTTLECMATGHPHPL
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   .........370.........380.........390.........400.........410.........420
Sequence  ITWTRDNGLELDGSRHVATSSGLYLQNITQRDHGRFTCHANNSHGTVQAAANIIVQAPPQ
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   .........430.........440.........450.........460.........470.........480
Sequence  FTVTPKDQVVLEEHAVEWLCEADGNPPPVIVWTKTGGQLPVEGQHTVLSSGTLRIDRAAQ
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   .........490.........500.........510.........520.........530.........540
Sequence  HDQGQYECQAVSSLGVKKVSVQLTVKPKALAVFTQLPQDTSVEVGKNINISCHAQGEPQP
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   .........550.........560.........570.........580.........590.........600
Sequence  IITWNKEGVQITESGKFHVDDEGTLTIYDAGFPDQGRYECVARNSFGLAVTNMFLTVTAI
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   .........610.........620.........630.........640.........650.........660
Sequence  QGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPHTSSDLLAQFHYPRDPLIVEMAR
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   .........670.........680.........690.........700.........710.........720
Sequence  AGEIFEHTLQLIRERVKQGLTVDLEGKEFRYNDLVSPRSLSLIANLSGCTARRPLPNCSN
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   .........730.........740.........750.........760.........770.........780
Sequence  RCFHAKYRAHDGTCNNLQQPTWGAALTAFARLLQPAYRDGIRAPRGLGLPVGSRQPLPPP
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   .........790.........800.........810.........820.........830.........840
Sequence  RLVATVWARAAAVTPDHSYTRMLMHWGWFLEHDLDHTVPALSTARFSDGRPCSSVCTNDP
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   .........850.........860.........870.........880.........890.........900
Sequence  PCFPMNTRHADPRGTHAPCMLFARSSPACASGRPSATVDSVYAREQINQQTAYIDGSNVY
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   .........910.........920.........930.........940.........950.........960
Sequence  GSSERESQALRDPSVPRGLLKTGFPWPPSGKPLLPFSTGPPTECARQEQESPCFLAGDHR
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   .........970.........980.........990.........1000.........1010.........1020
Sequence  ANEHLALAAMHTLWFREHNRMATELSALNPHWEGNTVYQEARKIVGAELQHITYSHWLPK
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   .........1030.........1040.........1050.........1060.........1070.........1080
Sequence  VLGDPGTRMLRGYRGYNPNVNAGIINSFATAAFRFGHTLINPILYRLNATLGEISEGHLP
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   .........1090.........1100.........1110.........1120.........1130.........1140
Sequence  FHKALFSPSRIIKEGGIDPVLRGLFGVAAKWRAPSYLLSPELTQRLFSAAYSAAVDSAAT
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   .........1150.........1160.........1170.........1180.........1190.........1200
Sequence  IIQRGRDHGIPPYVDFRVFCNLTSVKNFEDLQNEIKDSEIRQKLRKLYGSPGDIDLWPAL
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   .........1210.........1220.........1230.........1240.........1250.........1260
Sequence  MVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLKQASLSRVLCDN
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   .........1270.........1280.........1290.........1300.........1310.........1320
Sequence  GDSIQQVQADVFVKAEYPQDYLNCSEIPKVDLRVWQDCCADCRSRGQFRAVTQESQKKRS
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   .........1330.........1340.........1350.........1360.........1370.........1380
Sequence  AQYSYPVDKDMELSHLRSRQQDKIYVGEDARNVTVLAKTKFSQDFSTFAAEIQETITALR
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   .........1390.........1400.........1410.........1420.........1430.........1440
Sequence  EQINKLEARLRQAGCTDVRGVPRKAEERWMKEDCTHCICESGQVTCVVEICPPAPCPSPE
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   .........1450.........1460...
Sequence  LVKGTCCPVCRDRGMPSDSPEKR
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2gjm chain A

3D model

Region: 716 - 1297
Aligned: 572
Modelled: 582
Confidence: 100.0%
Identity: 40%
PDB header:oxidoreductase
Chain: A: PDB Molecule:lactoperoxidase;
PDBTitle: crystal structure of buffalo lactoperoxidase at 2.75a resolution

Phyre2

PDB 1d2v chain D

3D model

Region: 830 - 1297
Aligned: 459
Modelled: 468
Confidence: 100.0%
Identity: 42%
PDB header:oxidoreductase
Chain: D: PDB Molecule:myeloperoxidase;
PDBTitle: crystal structure of bromide-bound human myeloperoxidase isoform c at2 ph 5.5

Phyre2

PDB 1q4g chain A domain 1

3D model

Region: 702 - 1276
Aligned: 459
Modelled: 501
Confidence: 100.0%
Identity: 19%
Fold: Heme-dependent peroxidases
Superfamily: Heme-dependent peroxidases
Family: Myeloperoxidase-like

Phyre2

PDB 1cvu chain A domain 1

3D model

Region: 715 - 1271
Aligned: 449
Modelled: 483
Confidence: 100.0%
Identity: 20%
Fold: Heme-dependent peroxidases
Superfamily: Heme-dependent peroxidases
Family: Myeloperoxidase-like

Phyre2

PDB 2oyu chain P

3D model

Region: 738 - 1276
Aligned: 439
Modelled: 474
Confidence: 100.0%
Identity: 20%
PDB header:oxidoreductase
Chain: P: PDB Molecule:prostaglandin g/h synthase 1;
PDBTitle: indomethacin-(s)-alpha-ethyl-ethanolamide bound to cyclooxygenase-1

Phyre2

PDB 3pgh chain D

3D model

Region: 739 - 1271
Aligned: 435
Modelled: 465
Confidence: 100.0%
Identity: 20%
PDB header:oxidoreductase
Chain: D: PDB Molecule:cyclooxygenase-2;
PDBTitle: cyclooxygenase-2 (prostaglandin synthase-2) complexed with a non-2 selective inhibitor, flurbiprofen

Phyre2

PDB 1pgg chain B

3D model

Region: 738 - 1275
Aligned: 438
Modelled: 473
Confidence: 100.0%
Identity: 19%
PDB header:oxidoreductase
Chain: B: PDB Molecule:prostaglandin h2 synthase-1;
PDBTitle: prostaglandin h2 synthase-1 complexed with 1-(4-iodobenzoyl)-5-2 methoxy-2-methylindole-3-acetic acid (iodoindomethacin), trans model

Phyre2

PDB 1ht8 chain B

3D model

Region: 738 - 1275
Aligned: 438
Modelled: 470
Confidence: 100.0%
Identity: 19%
PDB header:oxidoreductase
Chain: B: PDB Molecule:prostaglandin h2 synthase-1;
PDBTitle: the 2.7 angstrom resolution model of ovine cox-1 complexed with2 alclofenac

Phyre2

PDB 1ddx chain A

3D model

Region: 739 - 1271
Aligned: 435
Modelled: 472
Confidence: 100.0%
Identity: 21%
PDB header:oxidoreductase
Chain: A: PDB Molecule:protein (prostaglandin h2 synthase-2);
PDBTitle: crystal structure of a mixture of arachidonic acid and prostaglandin2 bound to the cyclooxygenase active site of cox-2: prostaglandin3 structure

Phyre2

PDB 2id5 chain D

3D model

Region: 24 - 324
Aligned: 294
Modelled: 301
Confidence: 100.0%
Identity: 35%
PDB header:ligand binding protein,membrane protein
Chain: D: PDB Molecule:leucine rich repeat neuronal 6a;
PDBTitle: crystal structure of the lingo-1 ectodomain

Phyre2

PDB 3b43 chain A

3D model

Region: 230 - 599
Aligned: 367
Modelled: 370
Confidence: 100.0%
Identity: 27%
PDB header:structural protein
Chain: A: PDB Molecule:titin;
PDBTitle: i-band fragment i65-i70 from titin

Phyre2

PDB 2xot chain A

3D model

Region: 19 - 326
Aligned: 302
Modelled: 308
Confidence: 100.0%
Identity: 25%
PDB header:cell adhesion
Chain: A: PDB Molecule:amphoterin-induced protein 1;
PDBTitle: crystal structure of neuronal leucine rich repeat protein amigo-1

Phyre2

PDB 2ifg chain B

3D model

Region: 24 - 601
Aligned: 334
Modelled: 344
Confidence: 100.0%
Identity: 28%
PDB header:transferase
Chain: B: PDB Molecule:high affinity nerve growth factor receptor;
PDBTitle: structure of the extracellular segment of human trka in complex with2 nerve growth factor

Phyre2

PDB 3dmk chain B

3D model

Region: 233 - 597
Aligned: 362
Modelled: 365
Confidence: 100.0%
Identity: 26%
PDB header:cell adhesion
Chain: B: PDB Molecule:down syndrome cell adhesion molecule (dscam) isoform
PDBTitle: crystal structure of down syndrome cell adhesion molecule (dscam)2 isoform 1.30.30, n-terminal eight ig domains

Phyre2

PDB 3qs7 chain F

3D model

Region: 241 - 595
Aligned: 325
Modelled: 355
Confidence: 100.0%
Identity: 15%
PDB header:cytokine/signaling protein
Chain: F: PDB Molecule:fl cytokine receptor;
PDBTitle: crystal structure of a human flt3 ligand-receptor ternary complex

Phyre2

PDB 3laf chain A

3D model

Region: 233 - 600
Aligned: 364
Modelled: 368
Confidence: 100.0%
Identity: 24%
PDB header:apoptosis
Chain: A: PDB Molecule:deleted in colorectal cancer;
PDBTitle: structure of dcc, a netrin-1 receptor

Phyre2

PDB 1e07 chain A

3D model

Region: 235 - 599
Aligned: 355
Modelled: 365
Confidence: 100.0%
Identity: 22%
PDB header:glycoprotein
Chain: A: PDB Molecule:carcinoembryonic antigen;
PDBTitle: model of human carcinoembryonic antigen by homology2 modelling and curve-fitting to experimental solution3 scattering data

Phyre2

PDB 3jxa chain A

3D model

Region: 232 - 598
Aligned: 361
Modelled: 367
Confidence: 100.0%
Identity: 28%
PDB header:cell adhesion
Chain: A: PDB Molecule:contactin 4;
PDBTitle: immunoglobulin domains 1-4 of mouse cntn4

Phyre2

PDB 1bih chain A

3D model

Region: 232 - 598
Aligned: 362
Modelled: 367
Confidence: 100.0%
Identity: 22%
PDB header:insect immunity
Chain: A: PDB Molecule:hemolin;
PDBTitle: crystal structure of the insect immune protein hemolin: a2 new domain arrangement with implications for homophilic3 adhesion

Phyre2

PDB 3qs9 chain F

3D model

Region: 241 - 595
Aligned: 315
Modelled: 324
Confidence: 100.0%
Identity: 20%
PDB header:cytokine/signaling protein
Chain: F: PDB Molecule:fl cytokine receptor;
PDBTitle: crystal structure of a human flt3 ligand-receptor ternary complex

Phyre2
1

c2gjmA_
2

c1d2vD_
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d1q4ga1
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d1cvua1
5

c2oyuP_
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c3pghD_
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c1pggB_
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c1ht8B_
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c1ddxA_
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c2id5D_
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c3b43A_
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c2xotA_
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c2ifgB_
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c3dmkB_
15

c3qs7F_
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c3lafA_
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c1e07A_
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c3jxaA_
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c1bihA_
20

c3qs9F_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2gjmA_



100.0 40 PDB header:oxidoreductase
Chain: A: PDB Molecule:lactoperoxidase;
PDBTitle: crystal structure of buffalo lactoperoxidase at 2.75a resolution
2c1d2vD_



100.0 42 PDB header:oxidoreductase
Chain: D: PDB Molecule:myeloperoxidase;
PDBTitle: crystal structure of bromide-bound human myeloperoxidase isoform c at2 ph 5.5
3d1q4ga1



100.0 19 Fold:Heme-dependent peroxidases
Superfamily:Heme-dependent peroxidases
Family:Myeloperoxidase-like
4d1cvua1



100.0 20 Fold:Heme-dependent peroxidases
Superfamily:Heme-dependent peroxidases
Family:Myeloperoxidase-like
5c2oyuP_



100.0 20 PDB header:oxidoreductase
Chain: P: PDB Molecule:prostaglandin g/h synthase 1;
PDBTitle: indomethacin-(s)-alpha-ethyl-ethanolamide bound to cyclooxygenase-1
6c3pghD_



100.0 20 PDB header:oxidoreductase
Chain: D: PDB Molecule:cyclooxygenase-2;
PDBTitle: cyclooxygenase-2 (prostaglandin synthase-2) complexed with a non-2 selective inhibitor, flurbiprofen
7c1pggB_



100.0 19 PDB header:oxidoreductase
Chain: B: PDB Molecule:prostaglandin h2 synthase-1;
PDBTitle: prostaglandin h2 synthase-1 complexed with 1-(4-iodobenzoyl)-5-2 methoxy-2-methylindole-3-acetic acid (iodoindomethacin), trans model
8c1ht8B_



100.0 19 PDB header:oxidoreductase
Chain: B: PDB Molecule:prostaglandin h2 synthase-1;
PDBTitle: the 2.7 angstrom resolution model of ovine cox-1 complexed with2 alclofenac
9c1ddxA_



100.0 21 PDB header:oxidoreductase
Chain: A: PDB Molecule:protein (prostaglandin h2 synthase-2);
PDBTitle: crystal structure of a mixture of arachidonic acid and prostaglandin2 bound to the cyclooxygenase active site of cox-2: prostaglandin3 structure
10c2id5D_



100.0 35 PDB header:ligand binding protein,membrane protein
Chain: D: PDB Molecule:leucine rich repeat neuronal 6a;
PDBTitle: crystal structure of the lingo-1 ectodomain
11c3b43A_



100.0 27 PDB header:structural protein
Chain: A: PDB Molecule:titin;
PDBTitle: i-band fragment i65-i70 from titin
12c2xotA_



100.0 25 PDB header:cell adhesion
Chain: A: PDB Molecule:amphoterin-induced protein 1;
PDBTitle: crystal structure of neuronal leucine rich repeat protein amigo-1
13c2ifgB_



100.0 28 PDB header:transferase
Chain: B: PDB Molecule:high affinity nerve growth factor receptor;
PDBTitle: structure of the extracellular segment of human trka in complex with2 nerve growth factor
14c3dmkB_



100.0 26 PDB header:cell adhesion
Chain: B: PDB Molecule:down syndrome cell adhesion molecule (dscam) isoform
PDBTitle: crystal structure of down syndrome cell adhesion molecule (dscam)2 isoform 1.30.30, n-terminal eight ig domains
15c3qs7F_



100.0 15 PDB header:cytokine/signaling protein
Chain: F: PDB Molecule:fl cytokine receptor;
PDBTitle: crystal structure of a human flt3 ligand-receptor ternary complex
16c3lafA_



100.0 24 PDB header:apoptosis
Chain: A: PDB Molecule:deleted in colorectal cancer;
PDBTitle: structure of dcc, a netrin-1 receptor
17c1e07A_



100.0 22 PDB header:glycoprotein
Chain: A: PDB Molecule:carcinoembryonic antigen;
PDBTitle: model of human carcinoembryonic antigen by homology2 modelling and curve-fitting to experimental solution3 scattering data
18c3jxaA_



100.0 28 PDB header:cell adhesion
Chain: A: PDB Molecule:contactin 4;
PDBTitle: immunoglobulin domains 1-4 of mouse cntn4
19c1bihA_



100.0 22 PDB header:insect immunity
Chain: A: PDB Molecule:hemolin;
PDBTitle: crystal structure of the insect immune protein hemolin: a2 new domain arrangement with implications for homophilic3 adhesion
20c3qs9F_



100.0 20 PDB header:cytokine/signaling protein
Chain: F: PDB Molecule:fl cytokine receptor;
PDBTitle: crystal structure of a human flt3 ligand-receptor ternary complex
21c2om5A_



not modelled 100.0 28 PDB header:cell adhesion
Chain: A: PDB Molecule:contactin 2;
PDBTitle: n-terminal fragment of human tax1
22c3p3yA_



not modelled 100.0 25 PDB header:cell adhesion
Chain: A: PDB Molecule:neurofascin;
PDBTitle: crystal structure of neurofascin homophilic adhesion complex in space2 group p6522
23c2ec8A_



not modelled 100.0 18 PDB header:transferase
Chain: A: PDB Molecule:mast/stem cell growth factor receptor;
PDBTitle: crystal structure of the exctracellular domain of the receptor2 tyrosine kinase, kit
24c1z7zI_



not modelled 100.0 17 PDB header:virus/receptor
Chain: I: PDB Molecule:intercellular adhesion molecule-1;
PDBTitle: cryo-em structure of human coxsackievirus a21 complexed with five2 domain icam-1kilifi
25c2v5mA_



not modelled 100.0 25 PDB header:cell adhesion
Chain: A: PDB Molecule:dscam;
PDBTitle: structural basis for dscam isoform specificity
26c1qgc4_



not modelled 100.0 18 PDB header:virus/immune system
Chain: 4: PDB Molecule:protein (immunoglobulin);
PDBTitle: structure of the complex of an fab fragment of a neutralizing antibody2 with foot and mouth disease virus
27c3chnS_



not modelled 100.0 19 PDB header:immune system
Chain: S: PDB Molecule:secretory component;
PDBTitle: solution structure of human secretory iga1
28c3chnD_



not modelled 100.0 16 PDB header:immune system
Chain: D: PDB Molecule:ig alpha-1 chain c region;
PDBTitle: solution structure of human secretory iga1
29c2rcjD_



not modelled 100.0 16 PDB header:immune system
Chain: D: PDB Molecule:light chain;
PDBTitle: solution structure of human immunoglobulin m
30c2gy7B_



not modelled 100.0 16 PDB header:signaling protein
Chain: B: PDB Molecule:angiopoietin-1 receptor;
PDBTitle: angiopoietin-2/tie2 complex crystal structure
31c2v5rB_



not modelled 100.0 26 PDB header:cell adhesion
Chain: B: PDB Molecule:dscam;
PDBTitle: structural basis for dscam isoform specificity
32c1hzhK_



not modelled 100.0 13 PDB header:immune system
Chain: K: PDB Molecule:immunoglobulin heavy chain;
PDBTitle: crystal structure of the intact human igg b12 with broad and potent2 activity against primary hiv-1 isolates: a template for hiv vaccine3 design
33c2v70D_



not modelled 100.0 32 PDB header:structural protein
Chain: D: PDB Molecule:slit homolog 2 protein n-product;
PDBTitle: third lrr domain of human slit2
34c1igtB_



not modelled 100.0 15 PDB header:immunoglobulin
Chain: B: PDB Molecule:igg2a intact antibody - mab231;
PDBTitle: structure of immunoglobulin
35c2v9sC_



not modelled 100.0 37 PDB header:structural protein
Chain: C: PDB Molecule:slit homolog 2 protein n-product;
PDBTitle: second lrr domain of human slit2
36c2e9wB_



not modelled 100.0 16 PDB header:transferase/hormone
Chain: B: PDB Molecule:mast/stem cell growth factor receptor;
PDBTitle: crystal structure of the extracellular domain of kit in complex with2 stem cell factor (scf)
37c1zvoC_



not modelled 100.0 17 PDB header:immune system
Chain: C: PDB Molecule:myeloma immunoglobulin d delta;
PDBTitle: semi-extended solution structure of human myeloma2 immunoglobulin d determined by constrained x-ray scattering
38c1mcoH_



not modelled 100.0 15 PDB header:immunoglobulin
Chain: H: PDB Molecule:igg1 mcg intact antibody (heavy chain);
PDBTitle: three-dimensional structure of a human immunoglobulin with a hinge2 deletion
39c3oq3B_



not modelled 100.0 19 PDB header:cytokine/viral protein
Chain: B: PDB Molecule:ifn-alpha/beta binding protein c12r;
PDBTitle: structural basis of type-i interferon sequestration by a poxvirus2 decoy receptor
40c1wioA_



not modelled 100.0 20 PDB header:glycoprotein
Chain: A: PDB Molecule:t-cell surface glycoprotein cd4;
PDBTitle: structure of t-cell surface glycoprotein cd4, tetragonal2 crystal form
41d1ozna_



not modelled 100.0 36 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
42c3e6jA_



not modelled 100.0 29 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor diversity region;
PDBTitle: crystal structure of variable lymphocyte receptor (vlr) rbc36 in2 complex with h-trisaccharide
43c3v47B_



not modelled 100.0 37 PDB header:immune system
Chain: B: PDB Molecule:toll-like receptor 5b and variable lymphocyte receptor b.61
PDBTitle: crystal structure of the n-tetminal fragment of zebrafish tlr5 in2 complex with salmonella flagellin
44c3v44A_



not modelled 100.0 34 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 5b and variable lymphocyte receptor b.61
PDBTitle: crystal structure of the n-terminal fragment of zebrafish tlr5
45c2z64A_



not modelled 100.0 36 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 4;
PDBTitle: crystal structure of mouse tlr4 and mouse md-2 complex
46c3fxiA_



not modelled 100.0 36 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 4;
PDBTitle: crystal structure of the human tlr4-human md-2-e.coli lps ra complex
47c1igyB_



not modelled 100.0 12 PDB header:immunoglobulin
Chain: B: PDB Molecule:igg1 intact antibody mab61.1.3;
PDBTitle: structure of immunoglobulin
48c2z66A_



not modelled 100.0 28 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor b, toll-like receptor 4;
PDBTitle: crystal structure of the vt3 hybrid of human tlr4 and hagfish vlrb.61
49c2y25C_



not modelled 100.0 18 PDB header:structural protein
Chain: C: PDB Molecule:myomesin;
PDBTitle: crystal structure of the myomesin domains my11-my13
50c2z63A_



not modelled 100.0 40 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 4, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tv8 hybrid of human tlr4 and hagfish vlrb.61
51c1iraY_



not modelled 100.0 19 PDB header:complex (cytokine receptor/antagonist)
Chain: Y: PDB Molecule:interleukin-1 receptor;
PDBTitle: complex of the interleukin-1 receptor with the interleukin-1 receptor2 antagonist (il1ra)
52c1dnuB_



not modelled 100.0 38 PDB header:oxidoreductase
Chain: B: PDB Molecule:myeloperoxidase;
PDBTitle: structural analyses of human myeloperoxidase-thiocyanate complex
53c2wfhB_



not modelled 100.0 32 PDB header:splicing
Chain: B: PDB Molecule:slit homolog 2 protein c-product;
PDBTitle: the human slit 2 dimerization domain d4
54d1w8aa_



not modelled 100.0 34 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
55c2z81A_



not modelled 100.0 41 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 2, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tlr1-tlr2 heterodimer induced by binding of a2 tri-acylated lipopeptide
56c2o6qA_



not modelled 100.0 33 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor a;
PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors a29
57c3a79A_



not modelled 100.0 40 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 2, variable lymphocyte receptor b;
PDBTitle: crystal structure of tlr2-tlr6-pam2csk4 complex
58c3j0aB_



not modelled 100.0 36 PDB header:immune system
Chain: B: PDB Molecule:toll-like receptor 5;
PDBTitle: homology model of human toll-like receptor 5 fitted into an electron2 microscopy single particle reconstruction
59c2jllA_



not modelled 100.0 17 PDB header:cell adhesion
Chain: A: PDB Molecule:neural cell adhesion molecule 2;
PDBTitle: crystal structure of ncam2 igiv-fn3ii
60c2o6sA_



not modelled 100.0 31 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor b;
PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors b59
61c3shsA_



not modelled 100.0 16 PDB header:viral protein
Chain: A: PDB Molecule:hoc head outer capsid protein;
PDBTitle: three n-terminal domains of the bacteriophage rb49 highly immunogenic2 outer capsid protein (hoc)
62c1p53A_



not modelled 100.0 16 PDB header:cell adhesion
Chain: A: PDB Molecule:intercellular adhesion molecule-1;
PDBTitle: the crystal structure of icam-1 d3-d5 fragment
63c1o0vA_



not modelled 100.0 17 PDB header:immune system
Chain: A: PDB Molecule:immunoglobulin heavy chain epsilon-1;
PDBTitle: the crystal structure of ige fc reveals an asymmetrically bent2 conformation
64c2o26X_



not modelled 100.0 19 PDB header:cytokine/signaling protein
Chain: X: PDB Molecule:mast/stem cell growth factor receptor;
PDBTitle: structure of a class iii rtk signaling assembly
65c2yd9A_



not modelled 100.0 29 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase s;
PDBTitle: crystal structure of the n-terminal ig1-3 module of human receptor2 protein tyrosine phosphatase sigma
66c2y23A_



not modelled 100.0 16 PDB header:structural protein
Chain: A: PDB Molecule:myomesin;
PDBTitle: crystal structure of the myomesin domains my9-my11
67c2z80A_



not modelled 100.0 33 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 2, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tlr1-tlr2 heterodimer induced by binding of a2 tri-acylated lipopeptide
68c1ookG_



not modelled 100.0 28 PDB header:hydrolase
Chain: G: PDB Molecule:platelet glycoprotein ib alpha chain precursor;
PDBTitle: crystal structure of the complex of platelet receptor gpib-alpha and2 human alpha-thrombin
69c2a0zA_



not modelled 100.0 28 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 3;
PDBTitle: the molecular structure of toll-like receptor 3 ligand binding domain
70c2wngA_



not modelled 100.0 16 PDB header:cell adhesion
Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type
PDBTitle: complete extracellular structure of human signal regulatory2 protein (sirp) alpha
71c2z62A_



not modelled 100.0 34 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 4, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tv3 hybrid of human tlr4 and hagfish vlrb.61
72d1p9ag_



not modelled 100.0 27 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
73c2rikA_



not modelled 100.0 26 PDB header:structural protein
Chain: A: PDB Molecule:titin;
PDBTitle: i-band fragment i67-i69 from titin
74c2o6rA_



not modelled 100.0 33 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor b;
PDBTitle: structural diversity of the hagfish variable lymphocyte2 receptors b61
75c3m18A_



not modelled 100.0 30 PDB header:immune system
Chain: A: PDB Molecule:variable lymphocyte receptor a diversity region;
PDBTitle: crystal structure of variable lymphocyte receptor vlra.r2.1 in complex2 with hen egg lysozyme
76c3alpB_



not modelled 100.0 16 PDB header:cell adhesion
Chain: B: PDB Molecule:poliovirus receptor-related protein 1;
PDBTitle: cell adhesion protein
77c3rjdA_



not modelled 100.0 17 PDB header:immune system
Chain: A: PDB Molecule:high affinity immunoglobulin gamma fc receptor i;
PDBTitle: crystal structure of fc ri and its implication to high affinity2 immunoglobulin g binding
78c2wimA_



not modelled 99.9 23 PDB header:cell adhesion
Chain: A: PDB Molecule:neural cell adhesion molecule 2;
PDBTitle: crystal structure of ncam2 ig1-3
79c3a79B_



not modelled 99.9 37 PDB header:immune system
Chain: B: PDB Molecule:toll-like receptor 6, variable lymphocyte receptor b;
PDBTitle: crystal structure of tlr2-tlr6-pam2csk4 complex
80c2z7xB_



not modelled 99.9 40 PDB header:immune system
Chain: B: PDB Molecule:toll-like receptor 1, variable lymphocyte receptor b;
PDBTitle: crystal structure of the tlr1-tlr2 heterodimer induced by binding of a2 tri-acylated lipopeptide
81c1qz1A_



not modelled 99.9 25 PDB header:cell adhesion
Chain: A: PDB Molecule:neural cell adhesion molecule 1, 140 kda isoform;
PDBTitle: crystal structure of the ig 1-2-3 fragment of ncam
82c1za6H_



not modelled 99.9 17 PDB header:immune system
Chain: H: PDB Molecule:igg heavy chain;
PDBTitle: the structure of an antitumor ch2-domain-deleted humanized2 antibody
83c3o4oB_



not modelled 99.9 18 PDB header:immune system
Chain: B: PDB Molecule:interleukin-1 receptor accessory protein;
PDBTitle: crystal structure of an interleukin-1 receptor complex
84c4dkdC_



not modelled 99.9 19 PDB header:cytokine/transferase
Chain: C: PDB Molecule:macrophage colony-stimulating factor 1 receptor;
PDBTitle: crystal structure of human interleukin-34 bound to human csf-1r
85c2ft3B_



not modelled 99.9 31 PDB header:structural protein, signaling protein
Chain: B: PDB Molecule:biglycan;
PDBTitle: crystal structure of the biglycan dimer core protein
86c3f8uB_



not modelled 99.9 14 PDB header:immune system/isomerase
Chain: B: PDB Molecule:tapasin;
PDBTitle: tapasin/erp57 heterodimer
87c3mjgX_



not modelled 99.9 15 PDB header:hormone/transferase
Chain: X: PDB Molecule:beta-type platelet-derived growth factor receptor;
PDBTitle: the structure of a platelet derived growth factor receptor complex
88c1ziwA_



not modelled 99.9 30 PDB header:immune system
Chain: A: PDB Molecule:toll-like receptor 3;
PDBTitle: human toll-like receptor 3 extracellular domain structure
89c3rg1I_



not modelled 99.9 34 PDB header:immune system
Chain: I: PDB Molecule:cd180 molecule;
PDBTitle: crystal structure of the rp105/md-1 complex
90c3s6cA_



not modelled 99.9 13 PDB header:immune system, lipid binding protein
Chain: A: PDB Molecule:beta-2-microglobulin, t-cell surface glycoprotein cd1e,
PDBTitle: structure of human cd1e
91c3ov6A_



not modelled 99.9 13 PDB header:immune system
Chain: A: PDB Molecule:beta-2-microglobulin, t-cell surface glycoprotein cd1c, t-
PDBTitle: cd1c in complex with mpm (mannosyl-beta1-phosphomycoketide)
92c3o3uN_



not modelled 99.9 16 PDB header:transport protein, signaling protein
Chain: N: PDB Molecule:maltose-binding periplasmic protein, advanced glycosylation
PDBTitle: crystal structure of human receptor for advanced glycation endproducts2 (rage)
93c1xkuA_



not modelled 99.9 36 PDB header:structural protein
Chain: A: PDB Molecule:decorin;
PDBTitle: crystal structure of the dimeric protein core of decorin, the2 archetypal small leucine-rich repeat proteoglycan
94d1xkua_



not modelled 99.9 36 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
95c1dgiR_



not modelled 99.9 19 PDB header:virus/viral protein, receptor
Chain: R: PDB Molecule:poliovirus receptor;
PDBTitle:
96c3rbsA_



not modelled 99.9 18 PDB header:contractile protein
Chain: A: PDB Molecule:myomesin-1;
PDBTitle: crystal structure of the myomesin domains 10 and 11
97c2r9uC_



not modelled 99.9 28 PDB header:immune system
Chain: C: PDB Molecule:variable lymphocyte receptor;
PDBTitle: crystal structure of lamprey variable lymphocyte receptor 29132 ectodomain
98c2yd4A_



not modelled 99.9 31 PDB header:hydrolase
Chain: A: PDB Molecule:protein-tyrosine phosphatase crypalpha1 isoform;
PDBTitle: crystal structure of the n-terminal ig1-2 module of chicken receptor2 protein tyrosine phosphatase sigma
99c2yd7A_



not modelled 99.9 35 PDB header:hydrolase
Chain: A: PDB Molecule:ptprd protein;
PDBTitle: crystal structure of the n-terminal ig1-2 module of human receptor2 protein tyrosine phosphatase delta
100c3o4oC_



not modelled 99.9 18 PDB header:immune system
Chain: C: PDB Molecule:interleukin-1 receptor type 2;
PDBTitle: crystal structure of an interleukin-1 receptor complex
101c3ejjX_



not modelled 99.9 18 PDB header:cytokine/signaling protein
Chain: X: PDB Molecule:macrophage colony-stimulating factor 1 receptor;
PDBTitle: structure of m-csf bound to the first three domains of fms
102c3ojaB_



not modelled 99.9 29 PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
103c2yd3A_



not modelled 99.9 33 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase s;
PDBTitle: crystal structure of the n-terminal ig1-2 module of human2 receptor protein tyrosine phosphatase sigma
104c2yd2A_



not modelled 99.9 32 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase s;
PDBTitle: crystal structure of the n-terminal ig1-2 module of human2 receptor protein tyrosine phosphatase sigma
105c3lcyA_



not modelled 99.9 21 PDB header:transferase
Chain: A: PDB Molecule:titin;
PDBTitle: titin ig tandem domains a164-a165
106c3vh8H_



not modelled 99.9 12 PDB header:immune system
Chain: H: PDB Molecule:killer cell immunoglobulin-like receptor 3dl1;
PDBTitle: kir3dl1 in complex with hla-b*5701
107c2r15A_



not modelled 99.9 18 PDB header:contractile protein
Chain: A: PDB Molecule:myomesin-1;
PDBTitle: crystal structure of the myomesin domains 12 and 13
108c1djsA_



not modelled 99.9 26 PDB header:hormone/growth factor/receptor
Chain: A: PDB Molecule:protein (fibroblast growth factor receptor 2);
PDBTitle: ligand-binding portion of fibroblast growth factor receptor 2 in2 complex with fgf1
109c3v2aR_



not modelled 99.9 17 PDB header:hormone/signaling protein
Chain: R: PDB Molecule:vascular endothelial growth factor receptor 2;
PDBTitle: vegfr-2/vegf-a complex structure
110d2ifga3



not modelled 99.9 30 Fold:Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
Superfamily:L domain-like
Family:Ngr ectodomain-like
111c2v5yA_



not modelled 99.9 14 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase mu;
PDBTitle: crystal structure of the receptor protein tyrosine2 phosphatase mu ectodomain
112c3pxjD_



not modelled 99.9 32 PDB header:hydrolase
Chain: D: PDB Molecule:tyrosine-protein phosphatase lar;
PDBTitle: tandem ig repeats of dlar
113c2v9qA_



not modelled 99.9 27 PDB header:receptor
Chain: A: PDB Molecule:roundabout homolog 1;
PDBTitle: first and second ig domains from human robo1
114c2jlkA_



not modelled 99.9 20 PDB header:cell adhesion
Chain: A: PDB Molecule:neural cell adhesion molecule 2;
PDBTitle: crystal structure of ncam2 igiv-fn3i
115c3g3aA_



not modelled 99.9 27 PDB header:hydrolase/immune system
Chain: A: PDB Molecule:variable lymphocyte receptor vlrb.2d;
PDBTitle: structure of a lamprey variable lymphocyte receptor in2 complex with a protein antigen
116c2fboJ_



not modelled 99.9 26 PDB header:immune system
Chain: J: PDB Molecule:variable region-containing chitin-binding
PDBTitle: crystal structure of the two tandem v-type regions of vcbp32 (v-region-containing chitin binding protein) to 1.85 a
117c1sy6A_



not modelled 99.9 17 PDB header:signaling protein/antibiotic
Chain: A: PDB Molecule:t-cell surface glycoprotein cd3 gamma/epsilon
PDBTitle: crystal structure of cd3gammaepsilon heterodimer in complex2 with okt3 fab fragment
118c3pxhA_



not modelled 99.9 34 PDB header:hydrolase
Chain: A: PDB Molecule:receptor-type tyrosine-protein phosphatase f;
PDBTitle: tandem ig domains of tyrosine phosphatase lar
119c2a38A_



not modelled 99.9 29 PDB header:structural protein
Chain: A: PDB Molecule:titin;
PDBTitle: crystal structure of the n-terminus of titin
120c2x1xR_



not modelled 99.9 18 PDB header:hormone/signaling protein
Chain: R: PDB Molecule:vascular endothelial growth factor receptor 2;
PDBTitle: crystal structure of vegf-c in complex with domains 2 and 32 of vegfr2 in a tetragonal crystal form

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