Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA1A5D9
DateFri May 25 10:16:11 BST 2012
Unique Job ID0c8c41615101a198

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c1ciiA_
Top template information
PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
Confidence and coverage
Confidence: 98.9% Coverage: 87%
442 residues ( 87% of your sequence) have been modelled with 98.9% confidence by the single highest scoring template.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MSSPDGPSFPSGPLSGGASPSGDEGFFPFVLERRDSFLGGGPGPEEPEDLALQLQQKEKD
Secondary structure 
SS confidence 
Disorder  ?????????????????????
???????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  LLLAAELGKMLLERNEELRRQLETLSAQHLEREERLQQENHELRRGLAARGAEWEARAVE
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  LEGDVEALRAQLGEQRSEQQDSGRERARALSELSEQNLRLSQQLAQASQTEQELQRELDA
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  LRGQCQAQALAGAELRTRLESLQGENQMLQSRRQDLEAQIRGLREEVEKGEGRLQTTHEE
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  LLLLRRERREHSLELERARSEAGEALSALRRLQRRVSELEEESRLQDADVSAASLQSELA
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  HSLDDGDQGQGADAPGDTPTTRSPKTRKASSPQPSPPEEILEPPKKRTSLSPAEILEEKE
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  VEVAKLQDEISLQQAELQSLREELQRQKELRAQEDPGEALHSALSDRDEAVNKALELSLQ
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........430.........440.........450.........460.........470.........480
Sequence  LNRVSLERDSLSRELLRAIRQKVALTQELEAWQDDMQVVIGQQLRSQRQKELSASASSST
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........490.........500........
Sequence  PRRAAPRFSLRLGPGPAGGFLSNLFRRT
Secondary structure 
SS confidence 
Disorder 
?????
????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1cii chain A

3D model

Region: 1 - 444
Aligned: 442
Modelled: 444
Confidence: 98.9%
Identity: 10%
PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia

Phyre2

PDB 1bg1 chain A

3D model

Region: 50 - 220
Aligned: 171
Modelled: 171
Confidence: 96.6%
Identity: 9%
PDB header:transcription/dna
Chain: A: PDB Molecule:protein (transcription factor stat3b);
PDBTitle: transcription factor stat3b/dna complex

Phyre2

PDB 1bf5 chain A

3D model

Region: 45 - 206
Aligned: 162
Modelled: 162
Confidence: 96.2%
Identity: 12%
PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: tyrosine phosphorylated stat-1/dna complex

Phyre2

PDB 1c1g chain A

3D model

Region: 178 - 459
Aligned: 282
Modelled: 282
Confidence: 95.3%
Identity: 13%
PDB header:contractile protein
Chain: A: PDB Molecule:tropomyosin;
PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form

Phyre2

PDB 3oja chain B

3D model

Region: 89 - 234
Aligned: 146
Modelled: 146
Confidence: 94.6%
Identity: 16%
PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex

Phyre2

PDB 3cwg chain A

3D model

Region: 79 - 234
Aligned: 156
Modelled: 156
Confidence: 94.4%
Identity: 15%
PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment

Phyre2

PDB 3oja chain A

3D model

Region: 32 - 192
Aligned: 161
Modelled: 161
Confidence: 94.4%
Identity: 16%
PDB header:protein binding
Chain: A: PDB Molecule:leucine-rich immune molecule 1;
PDBTitle: crystal structure of lrim1/apl1c complex

Phyre2

PDB 1jch chain C

3D model

Region: 2 - 255
Aligned: 254
Modelled: 254
Confidence: 93.3%
Identity: 10%
PDB header:ribosome inhibitor, hydrolase
Chain: C: PDB Molecule:colicin e3;
PDBTitle: crystal structure of colicin e3 in complex with its immunity protein

Phyre2

PDB 2v71 chain A

3D model

Region: 41 - 193
Aligned: 153
Modelled: 153
Confidence: 91.1%
Identity: 15%
PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: coiled-coil region of nudel

Phyre2

PDB 1ei3 chain C

3D model

Region: 41 - 160
Aligned: 120
Modelled: 120
Confidence: 90.5%
Identity: 8%
PDB header:
PDB COMPND:

Phyre2

PDB 3hiz chain B

3D model

Region: 1 - 162
Aligned: 162
Modelled: 162
Confidence: 89.9%
Identity: 10%
PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit
PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha

Phyre2

PDB 3ghg chain K

3D model

Region: 13 - 139
Aligned: 127
Modelled: 127
Confidence: 89.6%
Identity: 9%
PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen

Phyre2

PDB 1deq chain F

3D model

Region: 114 - 222
Aligned: 109
Modelled: 109
Confidence: 89.5%
Identity: 10%
PDB header:
PDB COMPND:

Phyre2

PDB 3ipk chain A

3D model

Region: 48 - 156
Aligned: 109
Modelled: 109
Confidence: 85.4%
Identity: 14%
PDB header:cell adhesion
Chain: A: PDB Molecule:agi/ii;
PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans

Phyre2

PDB 1ei3 chain E

3D model

Region: 50 - 161
Aligned: 112
Modelled: 112
Confidence: 83.2%
Identity: 11%
PDB header:
PDB COMPND:

Phyre2

PDB 1yvl chain B

3D model

Region: 31 - 276
Aligned: 246
Modelled: 246
Confidence: 80.9%
Identity: 11%
PDB header:signaling protein
Chain: B: PDB Molecule:signal transducer and activator of transcription
PDBTitle: structure of unphosphorylated stat1

Phyre2

PDB 3ol1 chain A

3D model

Region: 40 - 132
Aligned: 93
Modelled: 93
Confidence: 78.6%
Identity: 22%
PDB header:structural protein
Chain: A: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b

Phyre2

PDB 3na7 chain A

3D model

Region: 22 - 187
Aligned: 166
Modelled: 166
Confidence: 78.5%
Identity: 13%
PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874

Phyre2

PDB 2fxm chain B

3D model

Region: 41 - 153
Aligned: 112
Modelled: 113
Confidence: 75.8%
Identity: 21%
PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment

Phyre2

PDB 2d3e chain D

3D model

Region: 46 - 174
Aligned: 128
Modelled: 129
Confidence: 75.0%
Identity: 12%
PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1
PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin

Phyre2

PDB 1wt6 chain B

3D model

Region: 399 - 459
Aligned: 61
Modelled: 61
Confidence: 59.4%
Identity: 16%
PDB header:transferase
Chain: B: PDB Molecule:myotonin-protein kinase;
PDBTitle: coiled-coil domain of dmpk

Phyre2
1
c1ciiA_
2
c1bg1A_
3
c1bf5A_
4
c1c1gA_
5
c3ojaB_
6
c3cwgA_
7
c3ojaA_
8
c1jchC_
9
c2v71A_
10
c1ei3C_
11
c3hizB_
12
c3ghgK_
13
c1deqF_
14
c3ipkA_
15
c1ei3E_
16
c1yvlB_
17
c3ol1A_
18
c3na7A_
19
c2fxmB_
20
c2d3eD_
21
22
23
24
25
26
27
28
29
30
c1wt6B_
31
32
33
34
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49
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1ciiA_
98.9 10 PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
2c1bg1A_
96.6 9 PDB header:transcription/dna
Chain: A: PDB Molecule:protein (transcription factor stat3b);
PDBTitle: transcription factor stat3b/dna complex
3c1bf5A_
96.2 12 PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: tyrosine phosphorylated stat-1/dna complex
4c1c1gA_
95.3 13 PDB header:contractile protein
Chain: A: PDB Molecule:tropomyosin;
PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form
5c3ojaB_
94.6 16 PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
6c3cwgA_
94.4 15 PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment
7c3ojaA_
94.4 16 PDB header:protein binding
Chain: A: PDB Molecule:leucine-rich immune molecule 1;
PDBTitle: crystal structure of lrim1/apl1c complex
8c1jchC_
93.3 10 PDB header:ribosome inhibitor, hydrolase
Chain: C: PDB Molecule:colicin e3;
PDBTitle: crystal structure of colicin e3 in complex with its immunity protein
9c2v71A_
91.1 15 PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: coiled-coil region of nudel
10c1ei3C_
90.5 8 PDB header:
PDB COMPND:
11c3hizB_
89.9 10 PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit
PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha
12c3ghgK_
89.6 9 PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen
13c1deqF_
89.5 10 PDB header:
PDB COMPND:
14c3ipkA_
85.4 14 PDB header:cell adhesion
Chain: A: PDB Molecule:agi/ii;
PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans
15c1ei3E_
83.2 11 PDB header:
PDB COMPND:
16c1yvlB_
80.9 11 PDB header:signaling protein
Chain: B: PDB Molecule:signal transducer and activator of transcription
PDBTitle: structure of unphosphorylated stat1
17c3ol1A_
78.6 22 PDB header:structural protein
Chain: A: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b
18c3na7A_
78.5 13 PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874
19c2fxmB_
75.8 21 PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment
20c2d3eD_
75.0 12 PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1
PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin
21c1deqO_
not modelled 74.8 6 PDB header:
PDB COMPND:
22c2oevA_
not modelled 72.5 9 PDB header:protein transport
Chain: A: PDB Molecule:programmed cell death 6-interacting protein;
PDBTitle: crystal structure of alix/aip1
23c3r6nA_
not modelled 70.9 10 PDB header:cell adhesion
Chain: A: PDB Molecule:desmoplakin;
PDBTitle: crystal structure of a rigid four spectrin repeat fragment of the2 human desmoplakin plakin domain
24c3dtpA_
not modelled 70.2 15 PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
25c1deqD_
not modelled 65.8 8 PDB header:
PDB COMPND:
26c3o0zD_
not modelled 64.6 12 PDB header:transferase
Chain: D: PDB Molecule:rho-associated protein kinase 1;
PDBTitle: crystal structure of a coiled-coil domain from human rock i
27c4a55B_
not modelled 63.9 14 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: crystal structure of p110alpha in complex with ish2 of p85alpha and2 the inhibitor pik-108
28c3l9oA_
not modelled 61.0 10 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dob1;
PDBTitle: crystal structure of mtr4, a co-factor of the nuclear exosome
29c3q8tB_
not modelled 59.7 13 PDB header:apoptosis
Chain: B: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the coiled coil domain of beclin 1, an essential2 autophagy protein
30c1wt6B_
59.4 16 PDB header:transferase
Chain: B: PDB Molecule:myotonin-protein kinase;
PDBTitle: coiled-coil domain of dmpk
31c3u59C_
not modelled 56.7 7 PDB header:contractile protein
Chain: C: PDB Molecule:tropomyosin beta chain;
PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta
32c2efrB_
not modelled 55.0 14 PDB header:contractile protein
Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution
33c2b9cA_
not modelled 52.1 12 PDB header:contractile protein
Chain: A: PDB Molecule:striated-muscle alpha tropomyosin;
PDBTitle: structure of tropomyosin's mid-region: bending and binding2 sites for actin
34c2gl2B_
not modelled 49.4 11 PDB header:cell adhesion
Chain: B: PDB Molecule:adhesion a;
PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada
35c1gk4A_
not modelled 47.7 14 PDB header:vimentin
Chain: A: PDB Molecule:vimentin;
PDBTitle: human vimentin coil 2b fragment (cys2)
36c3hnwB_
not modelled 47.1 8 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750
37c1y4cA_
not modelled 45.7 16 PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp
38d1sa0e_
not modelled 43.5 27 Fold:Non-globular all-alpha subunits of globular proteins
Superfamily:Stathmin
Family:Stathmin
39c2oexB_
not modelled 43.5 9 PDB header:protein transport
Chain: B: PDB Molecule:programmed cell death 6-interacting protein;
PDBTitle: structure of alix/aip1 v domain
40c2es4D_
not modelled 43.2 13 PDB header:hydrolase
Chain: D: PDB Molecule:lipase chaperone;
PDBTitle: crystal structure of the burkholderia glumae lipase-2 specific foldase in complex with its cognate lipase
41d2es4d1
not modelled 43.2 13 Fold:Non-globular all-alpha subunits of globular proteins
Superfamily:Lipase chaperone-like
Family:Lipase chaperone LifO-like
42c2rd0B_
not modelled 42.2 14 PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: structure of a human p110alpha/p85alpha complex
43c3vkgB_
not modelled 40.7 12 PDB header:motor protein
Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: crystal structure of an motor protein
44c2jeeA_
not modelled 31.2 19 PDB header:cell cycle
Chain: A: PDB Molecule:yiiu;
PDBTitle: xray structure of e. coli yiiu
45c3lx4B_
not modelled 31.1 50 PDB header:oxidoreductase
Chain: B: PDB Molecule:fe-hydrogenase;
PDBTitle: stepwise [fefe]-hydrogenase h-cluster assembly revealed in the2 structure of hyda(deltaefg)
46d1d2ta_
not modelled 30.4 40 Fold:Acid phosphatase/Vanadium-dependent haloperoxidase
Superfamily:Acid phosphatase/Vanadium-dependent haloperoxidase
Family:Type 2 phosphatidic acid phosphatase, PAP2
47c3nfgG_
not modelled 30.0 20 PDB header:transcription
Chain: G: PDB Molecule:dna-directed rna polymerase i subunit rpa49;
PDBTitle: crystal structure of dimerization module of rna polymerase i2 subcomplex a49/a34.5
48c1x8yA_
not modelled 29.5 17 PDB header:structural protein
Chain: A: PDB Molecule:lamin a/c;
PDBTitle: human lamin coil 2b
49d3c8ya1
not modelled 29.1 33 Fold:Fe-only hydrogenase
Superfamily:Fe-only hydrogenase
Family:Fe-only hydrogenase
50c2v66C_
not modelled 27.7 14 PDB header:structural protein
Chain: C: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c
51d1r5sa_
not modelled 27.5 33 Fold:Connexin43
Superfamily:Connexin43
Family:Connexin43
52c2qa7B_
not modelled 27.5 28 PDB header:actin binding
Chain: B: PDB Molecule:huntingtin-interacting protein 1;
PDBTitle: crystal structure of huntingtin-interacting protein 12 (hip1) coiled-coil domain with a basic surface suitable3 for hip-protein interactor (hippi)
53c3a5tB_
not modelled 26.8 9 PDB header:transcription regulator/dna
Chain: B: PDB Molecule:transcription factor mafg;
PDBTitle: crystal structure of mafg-dna complex
54d1h2vc2
not modelled 26.2 31 Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:MIF4G domain-like
55c2p22C_
not modelled 24.7 14 PDB header:transport protein
Chain: C: PDB Molecule:protein srn2;
PDBTitle: structure of the yeast escrt-i heterotetramer core
56d1ezsa_
not modelled 23.2 57 Fold:Ecotin, trypsin inhibitor
Superfamily:Ecotin, trypsin inhibitor
Family:Ecotin, trypsin inhibitor
57d1slua_
not modelled 23.0 43 Fold:Ecotin, trypsin inhibitor
Superfamily:Ecotin, trypsin inhibitor
Family:Ecotin, trypsin inhibitor
58c2akcC_
not modelled 22.9 44 PDB header:hydrolase
Chain: C: PDB Molecule:class a nonspecific acid phosphatase phon;
PDBTitle: crystal structure of tungstate complex of the phon protein2 from s. typhimurium
59d1v7mv_
not modelled 22.8 15 Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Short-chain cytokines
60d1xxfc_
not modelled 20.6 43 Fold:Ecotin, trypsin inhibitor
Superfamily:Ecotin, trypsin inhibitor
Family:Ecotin, trypsin inhibitor
61c3movB_
not modelled 20.6 16 PDB header:structural protein
Chain: B: PDB Molecule:lamin-b1;
PDBTitle: crystal structure of human lamin-b1 coil 2 segment
62c3qh9A_
not modelled 19.1 16 PDB header:structural protein
Chain: A: PDB Molecule:liprin-beta-2;
PDBTitle: human liprin-beta2 coiled-coil
63c2ktlA_
not modelled 15.9 32 PDB header:ligase
Chain: A: PDB Molecule:tyrosyl-trna synthetase;
PDBTitle: structure of c-terminal domain from mttyrrs of a. nidulans
64c1l8dB_
not modelled 15.4 21 PDB header:replication
Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase;
PDBTitle: rad50 coiled-coil zn hook
65c1c4cA_
not modelled 15.4 33 PDB header:oxidoreductase
Chain: A: PDB Molecule:protein (fe-only hydrogenase);
PDBTitle: binding of exogenously added carbon monoxide at the active2 site of the fe-only hydrogenase (cpi) from clostridium3 pasteurianum
66c3mv2A_
not modelled 13.2 14 PDB header:protein transport
Chain: A: PDB Molecule:coatomer subunit alpha;
PDBTitle: crystal structure of a-cop in complex with e-cop
67c2pmsD_
not modelled 12.6 17 PDB header:metal transport, hydrolase
Chain: D: PDB Molecule:pneumococcal surface protein a (pspa);
PDBTitle: crystal structure of the complex of human lactoferrin n-lobe and2 lactoferrin-binding domain of pneumococcal surface protein a
68c2v1yB_
not modelled 12.5 11 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: structure of a phosphoinositide 3-kinase alpha adaptor-2 binding domain (abd) in a complex with the ish2 domain3 from p85 alpha
69d1eera_
not modelled 12.5 6 Fold:4-helical cytokines
Superfamily:4-helical cytokines
Family:Short-chain cytokines
70c2e7sM_
not modelled 11.8 14 PDB header:endocytosis/exocytosis
Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the yeast sec2p gef domain
71c2no2A_
not modelled 11.7 22 PDB header:cell adhesion
Chain: A: PDB Molecule:huntingtin-interacting protein 1;
PDBTitle: crystal structure of the dllrkn-containing coiled-coil2 domain of huntingtin-interacting protein 1
72c2rmsB_
not modelled 11.4 32 PDB header:transcription
Chain: B: PDB Molecule:msin3a-binding protein;
PDBTitle: solution structure of the msin3a pah1-sap25 sid complex
73c3if4C_
not modelled 11.3 38 PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:integron cassette protein hfx_cass5;
PDBTitle: structure from the mobile metagenome of north west arm2 sewage outfall: integron cassette protein hfx_cass5
74c1fo0H_
not modelled 10.9 23 PDB header:immune system
Chain: H: PDB Molecule:protein (allogeneic h-2kb mhc class i molecule);
PDBTitle: murine alloreactive scfv tcr-peptide-mhc class i molecule2 complex
75c3bewD_
not modelled 10.8 36 PDB header:immune system
Chain: D: PDB Molecule:major histocompatibility complex class i
PDBTitle: 10mer crystal structure of chicken mhc class i haplotype b21
76c1wbzA_
not modelled 10.4 23 PDB header:immune system
Chain: A: PDB Molecule:h-2 class i histocompatibility antigen, k-b
PDBTitle: crystal structures of murine mhc class i h-2 db and kb2 molecules in complex with ctl epitopes from influenza a3 virus: implications for tcr repertoire selection and4 immunodominance
77c1namH_
not modelled 10.4 23 PDB header:immune system
Chain: H: PDB Molecule:h-2 class i histocompatibility antigen, k-b alpha chain
PDBTitle: murine alloreactive scfv tcr-peptide-mhc class i molecule complex
78c2kw3A_
not modelled 10.3 50 PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding protein rfx5;
PDBTitle: heterotrimeric interaction between rfx5 and rfxap
79c2y3aB_
not modelled 10.2 15 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta;
PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941
80d2ap3a1
not modelled 10.1 8 Fold:Four-helical up-and-down bundle
Superfamily:MW0975(SA0943)-like
Family:MW0975(SA0943)-like
81c3cm8A_
not modelled 10.1 46 PDB header:rna binding protein/transferase
Chain: A: PDB Molecule:polymerase acidic protein;
PDBTitle: a rna polymerase subunit structure from virus
82d1t3ta3
not modelled 10.0 33 Fold:PurS-like
Superfamily:PurS-like
Family:FGAM synthase PurL, PurS-like domain
83d1xbpg2
not modelled 9.9 26 Fold:Ribosomal L11/L12e N-terminal domain
Superfamily:Ribosomal L11/L12e N-terminal domain
Family:Ribosomal L11/L12e N-terminal domain
84c3rooA_
not modelled 9.9 23 PDB header:immune system
Chain: A: PDB Molecule:murine class i major histocompatibility complex h-2kb;
PDBTitle: murine class i major histocompatibility complex h-2kb in complex with2 immunodominant lcmv-derived gp34-41 peptide
85c1qhhA_
not modelled 9.9 18 PDB header:hydrolase
Chain: A: PDB Molecule:protein (pcra (subunit));
PDBTitle: structure of dna helicase with adpnp
86d2gycg2
not modelled 9.6 26 Fold:Ribosomal L11/L12e N-terminal domain
Superfamily:Ribosomal L11/L12e N-terminal domain
Family:Ribosomal L11/L12e N-terminal domain
87c4dylA_
not modelled 9.4 14 PDB header:transferase
Chain: A: PDB Molecule:tyrosine-protein kinase fes/fps;
PDBTitle: f-bar domain of human fes tyrosine kinase
88c1ypzA_
not modelled 9.4 23 PDB header:immune system
Chain: A: PDB Molecule:h2-t22 protein;
PDBTitle: immune receptor
89d2gqba1
not modelled 9.3 30 Fold:RPA2825-like
Superfamily:RPA2825-like
Family:RPA2825-like
90d1h16a_
not modelled 9.3 35 Fold:PFL-like glycyl radical enzymes
Superfamily:PFL-like glycyl radical enzymes
Family:PFL-like
91c2adzA_
not modelled 9.3 23 PDB header:protein binding
Chain: A: PDB Molecule:alpha-1-syntrophin;
PDBTitle: solution structure of the joined ph domain of alpha1-2 syntrophin
92c2k53A_
not modelled 9.2 23 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:a3dk08 protein;
PDBTitle: nmr solution structure of a3dk08 protein from clostridium2 thermocellum: northeast structural genomics consortium3 target cmr9
93c2jq5A_
not modelled 9.0 20 PDB header:structural genomics
Chain: A: PDB Molecule:sec-c motif;
PDBTitle: solution structure of rpa3114, a sec-c motif containing protein from2 rhodopseudomonas palustris; northeast structural genomics consortium3 target rpt5 / ontario center for structural proteomics target rp3097
94c3n4xB_
not modelled 8.9 18 PDB header:replication
Chain: B: PDB Molecule:monopolin complex subunit csm1;
PDBTitle: structure of csm1 full-length
95c2zswG_
not modelled 8.9 23 PDB header:immune system
Chain: G: PDB Molecule:h-2 class i histocompatibility antigen, k-b alpha chain;
PDBTitle: crystal structure of h-2kb in complex with the q600y variant of jhmv2 epitope s598
96c2zswC_
not modelled 8.9 23 PDB header:immune system
Chain: C: PDB Molecule:h-2 class i histocompatibility antigen, k-b alpha chain;
PDBTitle: crystal structure of h-2kb in complex with the q600y variant of jhmv2 epitope s598
97c2zswA_
not modelled 8.9 23 PDB header:immune system
Chain: A: PDB Molecule:h-2 class i histocompatibility antigen, k-b alpha chain;
PDBTitle: crystal structure of h-2kb in complex with the q600y variant of jhmv2 epitope s598
98d1mmsa2
not modelled 8.9 26 Fold:Ribosomal L11/L12e N-terminal domain
Superfamily:Ribosomal L11/L12e N-terminal domain
Family:Ribosomal L11/L12e N-terminal domain
99c2i1jA_
not modelled 8.9 11 PDB header:cell adhesion, membrane protein
Chain: A: PDB Molecule:moesin;
PDBTitle: moesin from spodoptera frugiperda at 2.1 angstroms resolution

Binding site prediction 

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