Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA1A5B4
DateWed May 9 17:58:46 BST 2012
Unique Job ID71e4a0c996e80f57

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template d2axti1
Top template information
Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein I, PsbI
Family:PsbI-like
Confidence and coverage
Confidence: 32.6% Coverage: 4%
33 residues ( 4% of your sequence) have been modelled with 32.6% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
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3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MQGEESLRILVEPEGDSFPLMEISTCETEASEQWDYVLVAQRHTQRDPRQARQQQFLEEL
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Disorder  ???????



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   .........70.........80.........90.........100.........110.........120
Sequence  RRKGFHIKVIRDQKQVFFGIRADNSVFGLYRTFLLEPEGPAPHAELAAPTTIPVTTSLRI
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?

































?????????????








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   .........130.........140.........150.........160.........170.........180
Sequence  RIVNFVVMNNKTSAGETFEDLMKDGVFEARFPLHKGEGRLKKTWARWRHMFREQPVDEIR
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???????????



























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   .........190.........200.........210.........220.........230.........240
Sequence  NYFGEKVALYFVWLGWYTYMLVPAALTGLLVFLSGFSLFEASQISKEICEAHDILMCPLG
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?
??????
















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   .........250.........260.........270.........280.........290.........300
Sequence  DHSRRYQRLSETCTFAKLTHLFDNDGTVVFAIFMALWATVFLEIWKRQRARVVLHWDLYV
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   .........310.........320.........330.........340.........350.........360
Sequence  WDEEQEEMALQLINCPDYKLRPYQHSYLRSTVILVLTLLMICLMIGMAHVLVVYRVLASA
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????????














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   .........370.........380.........390.........400.........410.........420
Sequence  LFSSSAVPFLEEQVTTAVVVTGALVHYVTIIIMTKINRCVALKLCDFEMPRTFSERESRF
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?????????







































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   .........430.........440.........450.........460.........470.........480
Sequence  TIRFFTLQFFTHFSSLIYIAFILGRINGHPGKSTRLAGLWKLEECHASGCMMDLFVQMAI
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?
?

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   .........490.........500.........510.........520.........530.........540
Sequence  IMGLKQTLSNCVEYLVPWVTHKCRSLRASESGHLPRDPELRDWRRNYLLNPVNTFSLFDE
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??

???????????








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   .........550.........560.........570.........580.........590.........600
Sequence  FMEMMIQYGFTTIFVAAFPLAPLLALFSNLVEIRLDAIKMVWLQRRLVPRKAKDIGTWLQ
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   .........610.........620.........630.........640.........650.........660
Sequence  VLETIGVLAVIANGMVIAFTSEFIPRVVYKYRYSPCLKEGNSTVDCLKGYVNHSLSVFHT
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   .........670.........680.........690.........700.........710.........720
Sequence  KDFQDPDGIEGSENVTLCRYRDYRNPPDYNFSEQFWFLLAIRLAFVILFEHVALCIKLIA
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??????????











?

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   .........730.........740.........750.........760.........770.........780
Sequence  AWFVPDIPQSVKNKVLEVKYQRLREKMWHGRQRLGGVGAGSRPPMPAHPTPASIFSARST
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???????????????????????????
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   ..
Sequence  DV
Secondary structure 

SS confidence 

Disorder  ??
Disorder confidence 

 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2axt chain I domain 1

3D model

Region: 420 - 452
Aligned: 33
Modelled: 33
Confidence: 32.6%
Identity: 21%
Fold: Single transmembrane helix
Superfamily: Photosystem II reaction center protein I, PsbI
Family: PsbI-like

Phyre2

PDB 3oq2 chain A

3D model

Region: 36 - 71
Aligned: 36
Modelled: 36
Confidence: 29.7%
Identity: 8%
PDB header:immune system
Chain: A: PDB Molecule:crispr-associated protein cas2;
PDBTitle: structure of a crispr associated protein cas2 from desulfovibrio2 vulgaris

Phyre2

PDB 1se7 chain A

3D model

Region: 172 - 190
Aligned: 18
Modelled: 19
Confidence: 24.4%
Identity: 50%
Fold: DNA polymerase III theta subunit-like
Superfamily: DNA polymerase III theta subunit-like
Family: DNA polymerase III theta subunit-like

Phyre2

PDB 2b4v chain A domain 2

3D model

Region: 29 - 97
Aligned: 67
Modelled: 69
Confidence: 20.8%
Identity: 10%
Fold: Nucleotidyltransferase
Superfamily: Nucleotidyltransferase
Family: RNA editing terminal uridyl transferase 2, RET2, catalytic domain

Phyre2

PDB 1r2a chain A

3D model

Region: 147 - 192
Aligned: 39
Modelled: 46
Confidence: 16.6%
Identity: 23%
Fold: Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Superfamily: Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Family: Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit

Phyre2

PDB 2dlq chain A domain 4

3D model

Region: 237 - 243
Aligned: 7
Modelled: 7
Confidence: 14.5%
Identity: 29%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: Classic zinc finger, C2H2

Phyre2

PDB 2lis chain A

3D model

Region: 156 - 174
Aligned: 19
Modelled: 19
Confidence: 14.4%
Identity: 11%
Fold: Fertilization protein
Superfamily: Fertilization protein
Family: Fertilization protein

Phyre2

PDB 3czp chain A

3D model

Region: 695 - 755
Aligned: 61
Modelled: 61
Confidence: 14.0%
Identity: 10%
PDB header:transferase
Chain: A: PDB Molecule:putative polyphosphate kinase 2;
PDBTitle: crystal structure of putative polyphosphate kinase 2 from pseudomonas2 aeruginosa pa01

Phyre2

PDB 3voq chain A

3D model

Region: 567 - 575
Aligned: 9
Modelled: 9
Confidence: 13.4%
Identity: 22%
PDB header:membrane protein
Chain: A: PDB Molecule:target of rapamycin complex 2 subunit mapkap1;
PDBTitle: crystal structure of the pleckstrin homology domain of human sin1, a2 torc2 subunit

Phyre2

PDB 1har chain A

3D model

Region: 34 - 65
Aligned: 31
Modelled: 32
Confidence: 13.1%
Identity: 16%
Fold: DNA/RNA polymerases
Superfamily: DNA/RNA polymerases
Family: Reverse transcriptase

Phyre2

PDB 3kny chain A

3D model

Region: 726 - 741
Aligned: 16
Modelled: 16
Confidence: 13.1%
Identity: 38%
PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein bt_3535;
PDBTitle: crystal structure of a two domain protein with unknown function2 (bt_3535) from bacteroides thetaiotaomicron vpi-5482 at 2.60 a3 resolution

Phyre2

PDB 3dkx chain A

3D model

Region: 139 - 155
Aligned: 17
Modelled: 17
Confidence: 10.9%
Identity: 41%
PDB header:replication
Chain: A: PDB Molecule:replication protein repb;
PDBTitle: crystal structure of the replication initiator protein2 encoded on plasmid pmv158 (repb), trigonal form, to 2.7 ang3 resolution

Phyre2

PDB 1pk8 chain A domain 1

3D model

Region: 31 - 57
Aligned: 27
Modelled: 27
Confidence: 10.3%
Identity: 19%
Fold: PreATP-grasp domain
Superfamily: PreATP-grasp domain
Family: Synapsin domain

Phyre2

PDB 1i7n chain A domain 1

3D model

Region: 31 - 57
Aligned: 27
Modelled: 27
Confidence: 9.8%
Identity: 19%
Fold: PreATP-grasp domain
Superfamily: PreATP-grasp domain
Family: Synapsin domain

Phyre2

PDB 3eud chain E

3D model

Region: 68 - 83
Aligned: 16
Modelled: 16
Confidence: 9.5%
Identity: 19%
PDB header:nuclear protein
Chain: E: PDB Molecule:protein shq1;
PDBTitle: structure of the cs domain of the essential h/aca rnp2 assembly protein shq1p

Phyre2

PDB 2kvg chain A

3D model

Region: 754 - 773
Aligned: 20
Modelled: 20
Confidence: 9.4%
Identity: 35%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 32;
PDBTitle: structure of the three-cys2his2 domain of mouse testis zinc2 finger protein

Phyre2

PDB 1jg5 chain A

3D model

Region: 722 - 741
Aligned: 20
Modelled: 20
Confidence: 9.2%
Identity: 25%
Fold: GTP cyclohydrolase I feedback regulatory protein, GFRP
Superfamily: GTP cyclohydrolase I feedback regulatory protein, GFRP
Family: GTP cyclohydrolase I feedback regulatory protein, GFRP

Phyre2

PDB 1s1h chain O

3D model

Region: 723 - 737
Aligned: 15
Modelled: 15
Confidence: 9.0%
Identity: 20%
PDB header:ribosome
Chain: O: PDB Molecule:40s ribosomal protein s13;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.

Phyre2

PDB 1h2v chain C domain 1

3D model

Region: 596 - 621
Aligned: 26
Modelled: 26
Confidence: 8.8%
Identity: 23%
Fold: alpha-alpha superhelix
Superfamily: ARM repeat
Family: MIF4G domain-like

Phyre2

PDB 2eia chain A domain 2

3D model

Region: 732 - 780
Aligned: 48
Modelled: 49
Confidence: 8.8%
Identity: 17%
Fold: Retrovirus capsid protein, N-terminal core domain
Superfamily: Retrovirus capsid protein, N-terminal core domain
Family: Retrovirus capsid protein, N-terminal core domain

Phyre2
1

d2axti1
2

c3oq2A_
3

d1se7a_
4

d2b4va2
5

d1r2aa_
6

d2dlqa4
7

d2lisa_
8

c3czpA_
9

c3voqA_
10

d1hara_
11

c3knyA_
12

c3dkxA_
13

d1pk8a1
14

d1i7na1
15

c3eudE_
16

c2kvgA_
17

d1jg5a_
18

c1s1hO_
19

d1h2vc1
20

d2eiaa2
21



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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d2axti1



32.6 21 Fold:Single transmembrane helix
Superfamily:Photosystem II reaction center protein I, PsbI
Family:PsbI-like
2c3oq2A_



29.7 8 PDB header:immune system
Chain: A: PDB Molecule:crispr-associated protein cas2;
PDBTitle: structure of a crispr associated protein cas2 from desulfovibrio2 vulgaris
3d1se7a_



24.4 50 Fold:DNA polymerase III theta subunit-like
Superfamily:DNA polymerase III theta subunit-like
Family:DNA polymerase III theta subunit-like
4d2b4va2



20.8 10 Fold:Nucleotidyltransferase
Superfamily:Nucleotidyltransferase
Family:RNA editing terminal uridyl transferase 2, RET2, catalytic domain
5d1r2aa_



16.6 23 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
6d2dlqa4



14.5 29 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
7d2lisa_



14.4 11 Fold:Fertilization protein
Superfamily:Fertilization protein
Family:Fertilization protein
8c3czpA_



14.0 10 PDB header:transferase
Chain: A: PDB Molecule:putative polyphosphate kinase 2;
PDBTitle: crystal structure of putative polyphosphate kinase 2 from pseudomonas2 aeruginosa pa01
9c3voqA_



13.4 22 PDB header:membrane protein
Chain: A: PDB Molecule:target of rapamycin complex 2 subunit mapkap1;
PDBTitle: crystal structure of the pleckstrin homology domain of human sin1, a2 torc2 subunit
10d1hara_



13.1 16 Fold:DNA/RNA polymerases
Superfamily:DNA/RNA polymerases
Family:Reverse transcriptase
11c3knyA_



13.1 38 PDB header:unknown function
Chain: A: PDB Molecule:hypothetical protein bt_3535;
PDBTitle: crystal structure of a two domain protein with unknown function2 (bt_3535) from bacteroides thetaiotaomicron vpi-5482 at 2.60 a3 resolution
12c3dkxA_



10.9 41 PDB header:replication
Chain: A: PDB Molecule:replication protein repb;
PDBTitle: crystal structure of the replication initiator protein2 encoded on plasmid pmv158 (repb), trigonal form, to 2.7 ang3 resolution
13d1pk8a1



10.3 19 Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:Synapsin domain
14d1i7na1



9.8 19 Fold:PreATP-grasp domain
Superfamily:PreATP-grasp domain
Family:Synapsin domain
15c3eudE_



9.5 19 PDB header:nuclear protein
Chain: E: PDB Molecule:protein shq1;
PDBTitle: structure of the cs domain of the essential h/aca rnp2 assembly protein shq1p
16c2kvgA_



9.4 35 PDB header:transcription
Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 32;
PDBTitle: structure of the three-cys2his2 domain of mouse testis zinc2 finger protein
17d1jg5a_



9.2 25 Fold:GTP cyclohydrolase I feedback regulatory protein, GFRP
Superfamily:GTP cyclohydrolase I feedback regulatory protein, GFRP
Family:GTP cyclohydrolase I feedback regulatory protein, GFRP
18c1s1hO_



9.0 20 PDB header:ribosome
Chain: O: PDB Molecule:40s ribosomal protein s13;
PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i.
19d1h2vc1



8.8 23 Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:MIF4G domain-like
20d2eiaa2



8.8 17 Fold:Retrovirus capsid protein, N-terminal core domain
Superfamily:Retrovirus capsid protein, N-terminal core domain
Family:Retrovirus capsid protein, N-terminal core domain
21c2azeC_



not modelled 8.6 25 PDB header:cell cycle, transcription
Chain: C: PDB Molecule:retinoblastoma-associated protein;
PDBTitle: structure of the rb c-terminal domain bound to an e2f1-dp12 heterodimer
22d2ae9a1



not modelled 8.4 21 Fold:DNA polymerase III theta subunit-like
Superfamily:DNA polymerase III theta subunit-like
Family:DNA polymerase III theta subunit-like
23c3zqpB_



not modelled 8.3 9 PDB header:dna-binding protein
Chain: B: PDB Molecule:terminase small subunit;
PDBTitle: crystal structure of the small terminase oligomerization2 domain from a spp1-like bacteriophage
24c3h87D_



not modelled 8.3 29 PDB header:toxin/antitoxin
Chain: D: PDB Molecule:putative uncharacterized protein;
PDBTitle: rv0301 rv0300 toxin antitoxin complex from mycobacterium tuberculosis
25c3h8kB_



not modelled 8.2 21 PDB header:ligase
Chain: B: PDB Molecule:autocrine motility factor receptor, isoform 2;
PDBTitle: crystal structure of ube2g2 complxed with the g2br domain of gp78 at2 1.8-a resolution
26d1nxia_



not modelled 8.2 15 Fold:Ferredoxin-like
Superfamily:Hypothetical protein VC0424
Family:Hypothetical protein VC0424
27d1p16a2



not modelled 8.1 17 Fold:ATP-grasp
Superfamily:DNA ligase/mRNA capping enzyme, catalytic domain
Family:mRNA capping enzyme
28c3gkuB_



not modelled 8.0 9 PDB header:rna binding protein
Chain: B: PDB Molecule:probable rna-binding protein;
PDBTitle: crystal structure of a probable rna-binding protein from clostridium2 symbiosum atcc 14940
29d3lyna_



not modelled 8.0 5 Fold:Fertilization protein
Superfamily:Fertilization protein
Family:Fertilization protein
30c2k1kA_



not modelled 8.0 57 PDB header:signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3
31c2k1lB_



not modelled 8.0 57 PDB header:signaling protein
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3
32c2k1lA_



not modelled 8.0 57 PDB header:signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3
33c2k1kB_



not modelled 8.0 57 PDB header:signaling protein
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3
34c1yshE_



not modelled 7.8 20 PDB header:structural protein/rna
Chain: E: PDB Molecule:40s ribosomal protein s13;
PDBTitle: localization and dynamic behavior of ribosomal protein l30e
35c2np3A_



not modelled 7.7 23 PDB header:transcription
Chain: A: PDB Molecule:putative tetr-family regulator;
PDBTitle: crystal structure of tetr-family regulator (sco0857) from streptomyces2 coelicolor a3.
36c1vk5A_



not modelled 7.7 36 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:expressed protein;
PDBTitle: x-ray structure of gene product from arabidopsis thaliana at3g22680
37d1vk5a_



not modelled 7.7 36 Fold:Hypothetical protein At3g22680
Superfamily:Hypothetical protein At3g22680
Family:Hypothetical protein At3g22680
38c3sooB_



not modelled 7.7 33 PDB header:rna binding protein
Chain: B: PDB Molecule:line-1 type transposase domain-containing protein 1;
PDBTitle: crystal structure of a line-1 type transposase domain-containing2 protein 1 (l1td1) from homo sapiens at 2.73 a resolution
39d2gova1



not modelled 7.7 12 Fold:Probable bacterial effector-binding domain
Superfamily:Probable bacterial effector-binding domain
Family:SOUL heme-binding protein
40d1vj7a1



not modelled 7.2 36 Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
41c3nr1A_



not modelled 7.1 36 PDB header:hydrolase
Chain: A: PDB Molecule:hd domain-containing protein 3;
PDBTitle: a metazoan ortholog of spot hydrolyzes ppgpp and plays a role in2 starvation responses
42c1dipA_



not modelled 7.0 19 PDB header:acetylation
Chain: A: PDB Molecule:delta-sleep-inducing peptide immunoreactive
PDBTitle: the solution structure of porcine delta-sleep-inducing2 peptide immunoreactive peptide, nmr, 10 structures
43c2jugB_



not modelled 7.0 17 PDB header:biosynthetic protein
Chain: B: PDB Molecule:tubc protein;
PDBTitle: multienzyme docking in hybrid megasynthetases
44d1bpoa1



not modelled 7.0 16 Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:Clathrin heavy-chain linker domain
45c2yx0A_



not modelled 6.9 25 PDB header:metal binding protein
Chain: A: PDB Molecule:radical sam enzyme;
PDBTitle: crystal structure of p. horikoshii tyw1
46c2huoA_



not modelled 6.8 22 PDB header:oxidoreductase
Chain: A: PDB Molecule:inositol oxygenase;
PDBTitle: crystal structure of mouse myo-inositol oxygenase in complex with2 substrate
47d3bxda1



not modelled 6.8 22 Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:MioX-like
48c3nqwB_



not modelled 6.7 21 PDB header:hydrolase
Chain: B: PDB Molecule:cg11900;
PDBTitle: a metazoan ortholog of spot hydrolyzes ppgpp and plays a role in2 starvation responses
49d2fzta1



not modelled 6.7 10 Fold:Methionine synthase domain-like
Superfamily:TM0693-like
Family:TM0693-like
50d1a6fa_



not modelled 6.7 13 Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:RNase P protein
51c3kowH_



not modelled 6.5 17 PDB header:metal binding protein
Chain: H: PDB Molecule:d-ornithine aminomutase s component;
PDBTitle: crystal structure of ornithine 4,5 aminomutase backsoaked complex
52d2h7aa1



not modelled 6.5 11 Fold:YcgL-like
Superfamily:YcgL-like
Family:YcgL-like
53c3nr7A_



not modelled 6.5 29 PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding protein h-ns;
PDBTitle: crystal structure of s. typhimurium h-ns 1-83
54c2k8qA_



not modelled 6.4 17 PDB header:structural protein
Chain: A: PDB Molecule:protein shq1;
PDBTitle: nmr structure of shq1p n-terminal domain
55d2fb5a1



not modelled 6.4 80 Fold:YojJ-like
Superfamily:YojJ-like
Family:YojJ-like
56d2a65a1



not modelled 6.4 16 Fold:SNF-like
Superfamily:SNF-like
Family:SNF-like
57d2z1ca1



not modelled 6.4 14 Fold:OB-fold
Superfamily:HupF/HypC-like
Family:HupF/HypC-like
58c3k4xA_



not modelled 6.3 11 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:proliferating cell nuclear antigen;
PDBTitle: eukaryotic sliding clamp pcna bound to dna
59c2vxgB_



not modelled 6.3 21 PDB header:gene regulation
Chain: B: PDB Molecule:cg6181-pa, isoform a;
PDBTitle: crystal structure of the conserved c-terminal region of ge-2 1
60c1vj7B_



not modelled 6.3 36 PDB header:hydrolase, transferase
Chain: B: PDB Molecule:bifunctional rela/spot;
PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis.
61d1szia_



not modelled 6.3 19 Fold:Four-helical up-and-down bundle
Superfamily:Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
Family:Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain
62c3m03B_



not modelled 6.2 28 PDB header:dna binding protein
Chain: B: PDB Molecule:origin recognition complex subunit 6;
PDBTitle: crystal structure of human orc6 fragment
63d1fftb2



not modelled 6.2 14 Fold:Transmembrane helix hairpin
Superfamily:Cytochrome c oxidase subunit II-like, transmembrane region
Family:Cytochrome c oxidase subunit II-like, transmembrane region
64c3c0fB_



not modelled 6.1 33 PDB header:unknown function
Chain: B: PDB Molecule:uncharacterized protein af_1514;
PDBTitle: crystal structure of a novel non-pfam protein af1514 from archeoglobus2 fulgidus dsm 4304 solved by s-sad using a cr x-ray source
65d2hwna1



not modelled 6.1 29 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit
66d1d6ta_



not modelled 6.1 13 Fold:Ribosomal protein S5 domain 2-like
Superfamily:Ribosomal protein S5 domain 2-like
Family:RNase P protein
67d2axtz1



not modelled 6.0 13 Fold:Transmembrane helix hairpin
Superfamily:PsbZ-like
Family:PsbZ-like
68c3if4C_



not modelled 6.0 24 PDB header:structural genomics, unknown function
Chain: C: PDB Molecule:integron cassette protein hfx_cass5;
PDBTitle: structure from the mobile metagenome of north west arm2 sewage outfall: integron cassette protein hfx_cass5
69d1n5ga_



not modelled 5.9 17 Fold:Zinc finger domain of DNA polymerase-alpha
Superfamily:Zinc finger domain of DNA polymerase-alpha
Family:Zinc finger domain of DNA polymerase-alpha
70d1jb0i_



not modelled 5.9 44 Fold:Single transmembrane helix
Superfamily:Subunit VIII of photosystem I reaction centre, PsaI
Family:Subunit VIII of photosystem I reaction centre, PsaI
71c2ro1A_



not modelled 5.8 25 PDB header:transcription
Chain: A: PDB Molecule:transcription intermediary factor 1-beta;
PDBTitle: nmr solution structures of human kap1 phd finger-bromodomain
72d2gz4a1



not modelled 5.7 11 Fold:HD-domain/PDEase-like
Superfamily:HD-domain/PDEase-like
Family:HD domain
73c2kwhA_



not modelled 5.6 6 PDB header:transport protein
Chain: A: PDB Molecule:rala-binding protein 1;
PDBTitle: ral binding domain of rlip76 (ralbp1)
74d2itba1



not modelled 5.5 8 Fold:Ferritin-like
Superfamily:Ferritin-like
Family:MiaE-like
75c3izbO_



not modelled 5.4 12 PDB header:ribosome
Chain: O: PDB Molecule:40s ribosomal protein rps13 (s15p);
PDBTitle: localization of the small subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome
76c2cpmA_



not modelled 5.4 18 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:sperm-associated antigen 7;
PDBTitle: solution structure of the r3h domain of human sperm-2 associated antigen 7
77d1t3ta3



not modelled 5.4 15 Fold:PurS-like
Superfamily:PurS-like
Family:FGAM synthase PurL, PurS-like domain
78c2hw4A_



not modelled 5.3 12 PDB header:structural genomics, hydrolase
Chain: A: PDB Molecule:14 kda phosphohistidine phosphatase;
PDBTitle: crystal structure of human phosphohistidine phosphatase
79d2uubc1



not modelled 5.2 17 Fold:Alpha-lytic protease prodomain-like
Superfamily:Prokaryotic type KH domain (KH-domain type II)
Family:Prokaryotic type KH domain (KH-domain type II)
80d1p9ya_



not modelled 5.2 23 Fold:Ribosome binding domain-like
Superfamily:Trigger factor ribosome-binding domain
Family:Trigger factor ribosome-binding domain
81c3r8kB_



not modelled 5.2 15 PDB header:apoptosis
Chain: B: PDB Molecule:heme-binding protein 2;
PDBTitle: crystal structure of human soul protein (hexagonal form)
82c3mjhD_



not modelled 5.2 27 PDB header:protein transport
Chain: D: PDB Molecule:early endosome antigen 1;
PDBTitle: crystal structure of human rab5a in complex with the c2h2 zinc finger2 of eea1
83d3d3ra1



not modelled 5.2 21 Fold:OB-fold
Superfamily:HupF/HypC-like
Family:HupF/HypC-like
84d1l8qa1



not modelled 5.1 53 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:TrpR-like
Family:Chromosomal replication initiation factor DnaA C-terminal domain IV

Binding site prediction 

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