Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA1A519
DateWed May 9 17:50:13 BST 2012
Unique Job ID86ab4f1d67910893

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c3k1qC_
Top template information
PDB header:virus
Chain: C: PDB Molecule:vp3b, the building block protein of inner shell;
PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics
Confidence and coverage
Confidence: 63.7% Coverage: 7%
23 residues ( 7% of your sequence) have been modelled with 63.7% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
Please note: You must be registered and logged in to use Phyrealarm.
Warning: 76% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MKRRQKRKHLENEESQETAEKGGGMSKSQEDALQPGSTRVAKGWSQGVGEVTSTSEYCSC
Secondary structure 
SS confidence 
Disorder  ???
?????????????????????????????????????????????????
?
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  VSSSRKLIHSGIQRIHRDSPQPQSPLAQVQERGETPPRSQHVSLSSYSSYKTCVSSLCVN
Secondary structure 
SS confidence 
Disorder  ???????????????????????????????????????????
????????????????
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  KEERGMKIYYMQVQMNKGVAVSWETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVSTRN
Secondary structure 
SS confidence 
Disorder  ????
?????????????
????
?????
??
???????????????????
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  LLSDSEPSGEEKEHEERTESDSLPGSPTVEDTPRAKTPDWLVTMENGFRCMACCRVFTTM
Secondary structure 
SS confidence 
Disorder 
?????????????????????????????????????????????
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  EALQEHVQFGIREGFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEE
Secondary structure 
SS confidence 
Disorder 
?
?
?????????????????????????????
Disorder confidence 
 
   .........310.........320.........330
Sequence  GQPTEEDLGLRRSWSQCPGCVFHSPKDRNS
Secondary structure 
SS confidence 
Disorder  ?????????
???????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3k1q chain C

3D model

Region: 226 - 248
Aligned: 23
Modelled: 23
Confidence: 63.7%
Identity: 39%
PDB header:virus
Chain: C: PDB Molecule:vp3b, the building block protein of inner shell;
PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics

Phyre2

PDB 1zr9 chain A domain 1

3D model

Region: 228 - 246
Aligned: 19
Modelled: 19
Confidence: 57.5%
Identity: 42%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: HkH motif-containing C2H2 finger

Phyre2

PDB 1zr9 chain A

3D model

Region: 228 - 246
Aligned: 19
Modelled: 19
Confidence: 57.5%
Identity: 42%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 593;
PDBTitle: solution structure of a human c2h2-type zinc finger protein

Phyre2

PDB 2dmi chain A

3D model

Region: 223 - 248
Aligned: 26
Modelled: 26
Confidence: 51.8%
Identity: 31%
PDB header:transcription
Chain: A: PDB Molecule:teashirt homolog 3;
PDBTitle: solution structure of the first and the second zf-c2h2 like2 domains of human teashirt homolog 3

Phyre2

PDB 2eps chain A domain 1

3D model

Region: 223 - 259
Aligned: 37
Modelled: 37
Confidence: 50.3%
Identity: 22%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: Classic zinc finger, C2H2

Phyre2

PDB 2epp chain A domain 1

3D model

Region: 228 - 252
Aligned: 25
Modelled: 25
Confidence: 48.0%
Identity: 36%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: Classic zinc finger, C2H2

Phyre2

PDB 2ghf chain A

3D model

Region: 225 - 259
Aligned: 35
Modelled: 35
Confidence: 45.2%
Identity: 20%
PDB header:transcription, metal binding protein
Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 1;
PDBTitle: solution structure of the complete zinc-finger region of2 human zinc-fingers and homeoboxes 1 (zhx1)

Phyre2

PDB 1hcn chain A

3D model

Region: 228 - 240
Aligned: 13
Modelled: 13
Confidence: 42.5%
Identity: 46%
Fold: Cystine-knot cytokines
Superfamily: Cystine-knot cytokines
Family: Gonadodropin/Follitropin

Phyre2

PDB 2d9h chain A

3D model

Region: 223 - 248
Aligned: 26
Modelled: 26
Confidence: 42.1%
Identity: 19%
PDB header:dna binding protein
Chain: A: PDB Molecule:zinc finger protein 692;
PDBTitle: solution structure of the forth and fifth zf-c2h2 domains2 of zinc finger protein 692

Phyre2

PDB 2ctd chain A

3D model

Region: 228 - 259
Aligned: 32
Modelled: 32
Confidence: 41.5%
Identity: 19%
PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 512;
PDBTitle: solution structure of two zf-c2h2 domains from human zinc2 finger protein 512

Phyre2

PDB 1zw8 chain A

3D model

Region: 228 - 248
Aligned: 21
Modelled: 21
Confidence: 41.4%
Identity: 24%
PDB header:transcription
Chain: A: PDB Molecule:zinc-responsive transcriptional regulator zap1;
PDBTitle: solution structure of a zap1 zinc-responsive domain2 provides insights into metalloregulatory transcriptional3 repression in saccharomyces cerevisiae

Phyre2

PDB 1zu1 chain A

3D model

Region: 228 - 248
Aligned: 21
Modelled: 21
Confidence: 38.7%
Identity: 24%
PDB header:rna binding protein
Chain: A: PDB Molecule:rna binding protein zfa;
PDBTitle: solution structure of the n-terminal zinc fingers of the2 xenopus laevis double stranded rna binding protein zfa

Phyre2

PDB 2kmk chain A

3D model

Region: 228 - 248
Aligned: 21
Modelled: 21
Confidence: 37.3%
Identity: 29%
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:zinc finger protein gfi-1;
PDBTitle: gfi-1 zinc fingers 3-5 complexed with dna

Phyre2

PDB 2dlq chain A

3D model

Region: 228 - 254
Aligned: 27
Modelled: 27
Confidence: 36.3%
Identity: 30%
PDB header:transcription
Chain: A: PDB Molecule:gli-kruppel family member hkr3;
PDBTitle: solution structure of the tandem four zf-c2h2 domain2 repeats of murine gli-kruppel family member hkr3

Phyre2

PDB 2ej4 chain A

3D model

Region: 220 - 249
Aligned: 30
Modelled: 30
Confidence: 35.7%
Identity: 30%
PDB header:gene regulation
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: functional and structural basis of nuclear localization2 signal in zic3 zinc finger domain: a role of conserved3 tryptophan residue in the zinc finger domain

Phyre2

PDB 1cn3 chain F

3D model

Region: 215 - 221
Aligned: 7
Modelled: 7
Confidence: 30.8%
Identity: 57%
PDB header:viral protein
Chain: F: PDB Molecule:fragment of coat protein vp2;
PDBTitle: interaction of polyomavirus internal protein vp2 with major2 capsid protein vp1 and implications for participation of3 vp2 in viral entry

Phyre2

PDB 2ct1 chain A

3D model

Region: 228 - 257
Aligned: 30
Modelled: 30
Confidence: 30.4%
Identity: 27%
PDB header:transcription
Chain: A: PDB Molecule:transcriptional repressor ctcf;
PDBTitle: solution structure of the zinc finger domain of2 transcriptional repressor ctcf protein

Phyre2

PDB 2y3a chain B

3D model

Region: 221 - 246
Aligned: 26
Modelled: 26
Confidence: 30.0%
Identity: 15%
PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta;
PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941

Phyre2

PDB 2kno chain A

3D model

Region: 221 - 246
Aligned: 26
Modelled: 26
Confidence: 29.8%
Identity: 23%
PDB header:hydrolase
Chain: A: PDB Molecule:tensin-like c1 domain-containing phosphatase;
PDBTitle: nmr solution structure of sh2 domain of the human tensin like c12 domain containing phosphatase (tenc1)

Phyre2

PDB 2eps chain A

3D model

Region: 228 - 259
Aligned: 32
Modelled: 32
Confidence: 26.6%
Identity: 25%
PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the 4th zinc finger domain of zinc2 finger protein 278

Phyre2
1
c3k1qC_
2
d1zr9a1
3
c1zr9A_
4
c2dmiA_
5
d2epsa1
6
d2eppa1
7
c2ghfA_
8
d1hcna_
9
c2d9hA_
10
c2ctdA_
11
c1zw8A_
12
c1zu1A_
13
c2kmkA_
14
c2dlqA_
15
c2ej4A_
16
c1cn3F_
17
c2ct1A_
18
c2y3aB_
19
c2knoA_
20
c2epsA_
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
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92
93
94
95
96
97
98
99



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c3k1qC_
63.7 39 PDB header:virus
Chain: C: PDB Molecule:vp3b, the building block protein of inner shell;
PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics
2d1zr9a1
57.5 42 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:HkH motif-containing C2H2 finger
3c1zr9A_
57.5 42 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 593;
PDBTitle: solution structure of a human c2h2-type zinc finger protein
4c2dmiA_
51.8 31 PDB header:transcription
Chain: A: PDB Molecule:teashirt homolog 3;
PDBTitle: solution structure of the first and the second zf-c2h2 like2 domains of human teashirt homolog 3
5d2epsa1
50.3 22 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
6d2eppa1
48.0 36 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
7c2ghfA_
45.2 20 PDB header:transcription, metal binding protein
Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 1;
PDBTitle: solution structure of the complete zinc-finger region of2 human zinc-fingers and homeoboxes 1 (zhx1)
8d1hcna_
42.5 46 Fold:Cystine-knot cytokines
Superfamily:Cystine-knot cytokines
Family:Gonadodropin/Follitropin
9c2d9hA_
42.1 19 PDB header:dna binding protein
Chain: A: PDB Molecule:zinc finger protein 692;
PDBTitle: solution structure of the forth and fifth zf-c2h2 domains2 of zinc finger protein 692
10c2ctdA_
41.5 19 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 512;
PDBTitle: solution structure of two zf-c2h2 domains from human zinc2 finger protein 512
11c1zw8A_
41.4 24 PDB header:transcription
Chain: A: PDB Molecule:zinc-responsive transcriptional regulator zap1;
PDBTitle: solution structure of a zap1 zinc-responsive domain2 provides insights into metalloregulatory transcriptional3 repression in saccharomyces cerevisiae
12c1zu1A_
38.7 24 PDB header:rna binding protein
Chain: A: PDB Molecule:rna binding protein zfa;
PDBTitle: solution structure of the n-terminal zinc fingers of the2 xenopus laevis double stranded rna binding protein zfa
13c2kmkA_
37.3 29 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:zinc finger protein gfi-1;
PDBTitle: gfi-1 zinc fingers 3-5 complexed with dna
14c2dlqA_
36.3 30 PDB header:transcription
Chain: A: PDB Molecule:gli-kruppel family member hkr3;
PDBTitle: solution structure of the tandem four zf-c2h2 domain2 repeats of murine gli-kruppel family member hkr3
15c2ej4A_
35.7 30 PDB header:gene regulation
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: functional and structural basis of nuclear localization2 signal in zic3 zinc finger domain: a role of conserved3 tryptophan residue in the zinc finger domain
16c1cn3F_
30.8 57 PDB header:viral protein
Chain: F: PDB Molecule:fragment of coat protein vp2;
PDBTitle: interaction of polyomavirus internal protein vp2 with major2 capsid protein vp1 and implications for participation of3 vp2 in viral entry
17c2ct1A_
30.4 27 PDB header:transcription
Chain: A: PDB Molecule:transcriptional repressor ctcf;
PDBTitle: solution structure of the zinc finger domain of2 transcriptional repressor ctcf protein
18c2y3aB_
30.0 15 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta;
PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941
19c2knoA_
29.8 23 PDB header:hydrolase
Chain: A: PDB Molecule:tensin-like c1 domain-containing phosphatase;
PDBTitle: nmr solution structure of sh2 domain of the human tensin like c12 domain containing phosphatase (tenc1)
20c2epsA_
26.6 25 PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the 4th zinc finger domain of zinc2 finger protein 278
21c1x5wA_
not modelled 25.5 19 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1;
PDBTitle: solution structure of the c2h2 type zinc-binding domain of2 human zinc finger protein 64, isoforms 1 and 2
22c1g83A_
not modelled 25.2 21 PDB header:transferase
Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fyn;
PDBTitle: crystal structure of fyn sh3-sh2
23d2oq1a1
not modelled 24.1 17 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
24c1wjpA_
not modelled 23.4 26 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 295;
PDBTitle: solution structure of zf-c2h2 domains from human zinc2 finger protein 295
25c2dlkA_
not modelled 23.1 31 PDB header:dna binding protein
Chain: A: PDB Molecule:novel protein;
PDBTitle: solution structure of the first and the second zf-c2h22 domains of zinc finger protein 692
26c2cshA_
not modelled 23.1 17 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 297b;
PDBTitle: solution structure of tandem repeat of the zf-c2h2 domains2 of human zinc finger protein 297b
27c2jvyA_
not modelled 23.1 36 PDB header:metal binding protein
Chain: A: PDB Molecule:nf-kappa-b essential modulator;
PDBTitle: solution structure of the eda-id-related c417f mutant of2 human nemo zinc finger
28d1njqa_
not modelled 22.6 37 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Plant C2H2 finger (QALGGH zinc finger)
29d1f2fa_
not modelled 21.3 10 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
30c2elxA_
not modelled 21.2 22 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 8th c2h2 zinc finger of mouse2 zinc finger protein 406
31d1g0da4
not modelled 21.1 21 Fold:Cysteine proteinases
Superfamily:Cysteine proteinases
Family:Transglutaminase core
32c2qrsA_
not modelled 20.6 27 PDB header:immune system
Chain: A: PDB Molecule:h-2 class i histocompatibility antigen k-b alpha
PDBTitle: crystal structure of a single chain trimer composed of the2 mhc i heavy chain h-2kb y84a, beta-2microglobulin, and3 ovalbumin-derived peptide.
33c2drpD_
not modelled 20.6 24 PDB header:transcription/dna
Chain: D: PDB Molecule:protein (tramtrack dna-binding domain);
PDBTitle: the crystal structure of a two zinc-finger peptide reveals2 an extension to the rules for zinc-finger/dna recognition
34c2yteA_
not modelled 20.0 23 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 484-2 512) of human zinc finger protein 473
35c2ebtA_
not modelled 19.5 29 PDB header:transcription
Chain: A: PDB Molecule:krueppel-like factor 5;
PDBTitle: solution structure of three tandem repeats of zf-c2h22 domains from human kruppel-like factor 5
36c1g6uB_
not modelled 19.1 39 PDB header:de novo protein
Chain: B: PDB Molecule:domain swapped dimer;
PDBTitle: crystal structure of a domain swapped dimer
37c2eozA_
not modelled 19.0 26 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 809-2 841) of human zinc finger protein 473
38c2elzA_
not modelled 19.0 21 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the 17th zf-c2h2 domain from human2 zinc finger protein 224
39c1nl0G_
not modelled 18.9 67 PDB header:immune system
Chain: G: PDB Molecule:factor ix;
PDBTitle: crystal structure of human factor ix gla domain in complex2 of an inhibitory antibody, 10c12
40c2ablA_
not modelled 18.7 21 PDB header:transferase
Chain: A: PDB Molecule:abl tyrosine kinase;
PDBTitle: sh3-sh2 domain fragment of human bcr-abl tyrosine kinase
41d2drpa1
not modelled 18.6 35 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
42d1vd4a_
not modelled 18.5 44 Fold:Rubredoxin-like
Superfamily:Zinc beta-ribbon
Family:Transcriptional factor domain
43c3vk6A_
not modelled 18.1 29 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase hakai;
PDBTitle: crystal structure of a phosphotyrosine binding domain
44d1srka_
not modelled 18.0 27 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
45d2adra2
not modelled 17.5 38 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
46d1kzfa_
not modelled 17.2 10 Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:Autoinducer synthetase
47d2oq1a2
not modelled 17.2 19 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
48c2gqjA_
not modelled 17.1 24 PDB header:gene regulation
Chain: A: PDB Molecule:zinc finger protein kiaa1196;
PDBTitle: solution structure of the two zf-c2h2 like domains(493-575)2 of human zinc finger protein kiaa1196
49d2shpa2
not modelled 17.0 12 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
50c2en3A_
not modelled 16.5 31 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 796-2 828) of human zinc finger protein 95 homolog
51c2rpcA_
not modelled 16.1 28 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: solution structure of the tandem zf-c2h2 domains from the2 human zinc finger protein zic 3
52d1ro5a_
not modelled 16.1 26 Fold:Acyl-CoA N-acyltransferases (Nat)
Superfamily:Acyl-CoA N-acyltransferases (Nat)
Family:Autoinducer synthetase
53c2eohA_
not modelled 15.8 19 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 780-2 812) of human zinc finger protein 28 homolog
54c1x6cA_
not modelled 15.4 26 PDB header:signaling protein
Chain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type
PDBTitle: solution structures of the sh2 domain of human protein-2 tyrosine phosphatase shp-1
55c2eovA_
not modelled 15.0 29 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 484;
PDBTitle: solution structure of the c2h2 type zinc finger (region 519-2 551) of human zinc finger protein 484
56d1wira_
not modelled 15.0 32 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:variant C2H2 finger
57d2ct1a2
not modelled 14.8 23 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
58c1va1A_
not modelled 14.7 24 PDB header:transcription
Chain: A: PDB Molecule:transcription factor sp1;
PDBTitle: solution structure of transcription factor sp1 dna binding2 domain (zinc finger 1)
59c1un6D_
not modelled 14.6 24 PDB header:rna-binding protein/rna
Chain: D: PDB Molecule:transcription factor iiia;
PDBTitle: the crystal structure of a zinc finger - rna complex2 reveals two modes of molecular recognition
60c1tf3A_
not modelled 14.0 31 PDB header:transcription/dna
Chain: A: PDB Molecule:transcription factor iiia;
PDBTitle: tfiiia finger 1-3 bound to dna, nmr, 22 structures
61c1rimA_
not modelled 13.8 26 PDB header:de novo protein
Chain: A: PDB Molecule:e6apc2 peptide;
PDBTitle: e6-binding zinc finger (e6apc2)
62c2ytaA_
not modelled 13.8 23 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 32;
PDBTitle: solution structure of c2h2 type zinc finger domain 3 in2 zinc finger protein 32
63c2dlyA_
not modelled 13.7 13 PDB header:transferase
Chain: A: PDB Molecule:fyn-related kinase;
PDBTitle: solution structure of the sh2 domain of murine fyn-related2 kinase
64c2yt9A_
not modelled 13.5 23 PDB header:transcription
Chain: A: PDB Molecule:zinc finger-containing protein 1;
PDBTitle: solution structure of c2h2 type zinc finger domain 345 in2 zinc finger protein 278
65c2lctA_
not modelled 13.4 17 PDB header:signaling protein
Chain: A: PDB Molecule:proto-oncogene vav;
PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
66c2epzA_
not modelled 13.4 31 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the 4th c2h2 type zinc finger domain2 of zinc finger protein 28 homolog
67c2dmwA_
not modelled 13.3 28 PDB header:membrane protein
Chain: A: PDB Molecule:synaptobrevin-like 1 variant;
PDBTitle: solution structure of the longin domain of synaptobrevin-2 like protein 1
68c2eo3A_
not modelled 13.3 18 PDB header:signaling protein
Chain: A: PDB Molecule:crk-like protein;
PDBTitle: solution structure of the sh2 domain from human crk-like2 protein
69c2adrA_
not modelled 12.8 37 PDB header:transcription regulation
Chain: A: PDB Molecule:adr1;
PDBTitle: adr1 dna-binding domain from saccharomyces cerevisiae, nmr,2 25 structures
70c3iufA_
not modelled 12.7 17 PDB header:protein binding
Chain: A: PDB Molecule:zinc finger protein ubi-d4;
PDBTitle: crystal structure of the c2h2-type zinc finger domain of human ubi-d4
71c2en8A_
not modelled 12.6 26 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the c2h2 type zinc finger (region 171-2 203) of human zinc finger protein 224
72d1ubdc3
not modelled 12.5 33 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
73c2ci8A_
not modelled 12.1 33 PDB header:translation
Chain: A: PDB Molecule:cytoplasmic protein nck1;
PDBTitle: sh2 domain of human nck1 adaptor protein - uncomplexed
74d2eyva1
not modelled 12.1 33 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
75c2yu5A_
not modelled 12.1 42 PDB header:rna binding protein
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the zf-c2h2 domain (669-699aa) in2 zinc finger protein 473
76c1rikA_
not modelled 11.8 26 PDB header:de novo protein
Chain: A: PDB Molecule:e6apc1 peptide;
PDBTitle: e6-binding zinc finger (e6apc1)
77d2glia1
not modelled 11.7 33 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
78d2csha1
not modelled 11.6 21 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
79d1a81e1
not modelled 11.6 19 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
80d1u86a1
not modelled 11.5 31 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
81d1a81a1
not modelled 11.5 19 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
82c2kvgA_
not modelled 11.4 26 PDB header:transcription
Chain: A: PDB Molecule:zinc finger and btb domain-containing protein 32;
PDBTitle: structure of the three-cys2his2 domain of mouse testis zinc2 finger protein
83c2cseW_
not modelled 11.1 23 PDB header:virus
Chain: W: PDB Molecule:major core protein lambda 1;
PDBTitle: features of reovirus outer-capsid protein mu1 revealed by2 electron and image reconstruction of the virion at 7.0-a3 resolution
84c3pt1A_
not modelled 11.1 13 PDB header:hydrolase
Chain: A: PDB Molecule:upf0364 protein ymr027w;
PDBTitle: structure of duf89 from saccharomyces cerevisiae co-crystallized with2 f6p.
85c2emcA_
not modelled 10.8 31 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 641-2 673) of human zinc finger protein 473
86d1opka2
not modelled 10.8 23 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
87c2eprA_
not modelled 10.8 26 PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the secound zinc finger domain of2 zinc finger protein 278
88c2dm0A_
not modelled 10.7 17 PDB header:transferase
Chain: A: PDB Molecule:tyrosine-protein kinase txk;
PDBTitle: solution structure of the sh2 domain of human tyrosine-2 protein kinase txk
89d1pica_
not modelled 10.6 15 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
90c2lceA_
not modelled 10.6 18 PDB header:transcription regulator
Chain: A: PDB Molecule:b-cell lymphoma 6 protein;
PDBTitle: chemical shift assignment of hr4436b from homo sapiens, northeast2 structural genomics consortium
91c2ee8A_
not modelled 10.5 27 PDB header:gene regulation
Chain: A: PDB Molecule:protein odd-skipped-related 2;
PDBTitle: solution structure of three zf-c2h2 domains from mouse2 protein odd-skipped-related 2 splicing isoform 2
92c2dmdA_
not modelled 10.5 24 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1 and 2;
PDBTitle: solution structure of the n-terminal c2h2 type zinc-binding2 domain of the zinc finger protein 64, isoforms 1 and 2
93c2epwA_
not modelled 10.5 27 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 268;
PDBTitle: solution structure of the 24th c2h2 type zinc finger domain2 of zinc finger protein 268
94d1cwea_
not modelled 10.3 19 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
95c2crcA_
not modelled 10.3 54 PDB header:ligase
Chain: A: PDB Molecule:ubiquitin conjugating enzyme 7 interacting
PDBTitle: solution structure of the zf-ranbp domain of the protein2 hbv associated factor
96c1a81E_
not modelled 10.3 21 PDB header:complex (transferase/peptide)
Chain: E: PDB Molecule:syk kinase;
PDBTitle: crystal structure of the tandem sh2 domain of the syk kinase bound to2 a dually tyrosine-phosphorylated itam
97d1jyra_
not modelled 10.1 12 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
98d1r1qa_
not modelled 10.0 11 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain
99d1csya_
not modelled 10.0 19 Fold:SH2-like
Superfamily:SH2 domain
Family:SH2 domain

Binding site prediction 

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