Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA0PK00
DateFri May 25 09:38:31 BST 2012
Unique Job ID9897288fcc7d7a4c

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c1deqO_
Top template information
PDB header:
PDB COMPND:
Confidence and coverage
Confidence: 97.4% Coverage: 29%
98 residues ( 29% of your sequence) have been modelled with 97.4% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MSGQLERCEREWHELEGEFQELQETHRIYKQKLEELAALQTLCSSSISKQKKHLKDLKLT
Secondary structure 
SS confidence 
Disorder  ????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  LQRCKRHASREEAELVQQMAANIKERQDVFFDMEAYLPKKNGLYLNLVLGNVNVTLLSNQ
Secondary structure 
SS confidence 
Disorder 
?????????
?
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  AKFAYKDEYEKFKLYLTIILLLGAVACRFVLHYRVTDEVFNFLLVWYYCTLTIRESILIS
Secondary structure 
SS confidence 
Disorder 
?
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  NGSRIKGWWVSHHYVSTFLSGVMLTWPNGPIYQKFRNQFLAFSIFQSCVQFLQYYYQRGC
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  LYRLRALGERNHLDLTVEGFQSWMWRGLTFLLPFLFCGHFWQLYNAVTLFELSSHEECRE
Secondary structure 
SS confidence 
Disorder 
??
??
Disorder confidence 
 
   .........310.........320.........330.........
Sequence  WQVFVLAFTFLILFLGNFLTTLKVVHAKLQKNRGKTKQP
Secondary structure 
SS confidence 
Disorder 
?????????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1deq chain O

3D model

Region: 1 - 98
Aligned: 98
Modelled: 98
Confidence: 97.4%
Identity: 7%
PDB header:
PDB COMPND:

Phyre2

PDB 3ghg chain K

3D model

Region: 1 - 101
Aligned: 101
Modelled: 101
Confidence: 97.4%
Identity: 5%
PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen

Phyre2

PDB 1ei3 chain E

3D model

Region: 1 - 101
Aligned: 101
Modelled: 101
Confidence: 97.3%
Identity: 7%
PDB header:
PDB COMPND:

Phyre2

PDB 3dtp chain A

3D model

Region: 1 - 97
Aligned: 89
Modelled: 97
Confidence: 97.0%
Identity: 12%
PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map

Phyre2

PDB 3u59 chain C

3D model

Region: 1 - 96
Aligned: 95
Modelled: 96
Confidence: 97.0%
Identity: 5%
PDB header:contractile protein
Chain: C: PDB Molecule:tropomyosin beta chain;
PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta

Phyre2

PDB 3oja chain B

3D model

Region: 1 - 96
Aligned: 88
Modelled: 96
Confidence: 96.9%
Identity: 13%
PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex

Phyre2

PDB 1ei3 chain C

3D model

Region: 1 - 97
Aligned: 97
Modelled: 97
Confidence: 96.8%
Identity: 6%
PDB header:
PDB COMPND:

Phyre2

PDB 2dq3 chain A

3D model

Region: 5 - 97
Aligned: 93
Modelled: 93
Confidence: 96.7%
Identity: 12%
PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: crystal structure of aq_298

Phyre2

PDB 3vkg chain B

3D model

Region: 3 - 97
Aligned: 95
Modelled: 95
Confidence: 96.4%
Identity: 9%
PDB header:motor protein
Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: crystal structure of an motor protein

Phyre2

PDB 1deq chain F

3D model

Region: 1 - 102
Aligned: 101
Modelled: 102
Confidence: 96.4%
Identity: 10%
PDB header:
PDB COMPND:

Phyre2

PDB 2fxm chain B

3D model

Region: 1 - 97
Aligned: 89
Modelled: 97
Confidence: 96.2%
Identity: 12%
PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment

Phyre2

PDB 2y3a chain B

3D model

Region: 1 - 97
Aligned: 96
Modelled: 97
Confidence: 96.1%
Identity: 15%
PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta;
PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941

Phyre2

PDB 3q8t chain B

3D model

Region: 3 - 94
Aligned: 91
Modelled: 92
Confidence: 96.0%
Identity: 12%
PDB header:apoptosis
Chain: B: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the coiled coil domain of beclin 1, an essential2 autophagy protein

Phyre2

PDB 1s94 chain A

3D model

Region: 3 - 96
Aligned: 94
Modelled: 94
Confidence: 96.0%
Identity: 15%
PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:s-syntaxin;
PDBTitle: crystal structure of the habc domain of neuronal syntaxin from the2 squid loligo pealei

Phyre2

PDB 1s94 chain A

3D model

Region: 3 - 96
Aligned: 94
Modelled: 94
Confidence: 96.0%
Identity: 15%
Fold: STAT-like
Superfamily: t-snare proteins
Family: t-snare proteins

Phyre2

PDB 1bf5 chain A

3D model

Region: 1 - 100
Aligned: 99
Modelled: 100
Confidence: 95.7%
Identity: 9%
PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: tyrosine phosphorylated stat-1/dna complex

Phyre2

PDB 3hnw chain B

3D model

Region: 1 - 70
Aligned: 70
Modelled: 70
Confidence: 95.7%
Identity: 7%
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750

Phyre2

PDB 3na7 chain A

3D model

Region: 1 - 98
Aligned: 98
Modelled: 98
Confidence: 95.7%
Identity: 9%
PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874

Phyre2

PDB 2d3e chain D

3D model

Region: 3 - 97
Aligned: 94
Modelled: 95
Confidence: 95.3%
Identity: 15%
PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1
PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin

Phyre2

PDB 2efr chain B

3D model

Region: 5 - 97
Aligned: 92
Modelled: 93
Confidence: 95.1%
Identity: 17%
PDB header:contractile protein
Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution

Phyre2
1
c1deqO_
2
c3ghgK_
3
c1ei3E_
4
c3dtpA_
5
c3u59C_
6
c3ojaB_
7
c1ei3C_
8
c2dq3A_
9
c3vkgB_
10
c1deqF_
11
c2fxmB_
12
c2y3aB_
13
c3q8tB_
14
c1s94A_
15
d1s94a_
16
c1bf5A_
17
c3hnwB_
18
c3na7A_
19
c2d3eD_
20
c2efrB_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1deqO_
97.4 7 PDB header:
PDB COMPND:
2c3ghgK_
97.4 5 PDB header:blood clotting
Chain: K: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of human fibrinogen
3c1ei3E_
97.3 7 PDB header:
PDB COMPND:
4c3dtpA_
97.0 12 PDB header:contractile protein
Chain: A: PDB Molecule:myosin 2 heavy chain chimera of smooth and
PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
5c3u59C_
97.0 5 PDB header:contractile protein
Chain: C: PDB Molecule:tropomyosin beta chain;
PDBTitle: n-terminal 98-aa fragment of smooth muscle tropomyosin beta
6c3ojaB_
96.9 13 PDB header:protein binding
Chain: B: PDB Molecule:anopheles plasmodium-responsive leucine-rich repeat protein
PDBTitle: crystal structure of lrim1/apl1c complex
7c1ei3C_
96.8 6 PDB header:
PDB COMPND:
8c2dq3A_
96.7 12 PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: crystal structure of aq_298
9c3vkgB_
96.4 9 PDB header:motor protein
Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: crystal structure of an motor protein
10c1deqF_
96.4 10 PDB header:
PDB COMPND:
11c2fxmB_
96.2 12 PDB header:contractile protein
Chain: B: PDB Molecule:myosin heavy chain, cardiac muscle beta isoform;
PDBTitle: structure of the human beta-myosin s2 fragment
12c2y3aB_
96.1 15 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit beta;
PDBTitle: crystal structure of p110beta in complex with icsh2 of p85beta and2 the drug gdc-0941
13c3q8tB_
96.0 12 PDB header:apoptosis
Chain: B: PDB Molecule:beclin-1;
PDBTitle: crystal structure of the coiled coil domain of beclin 1, an essential2 autophagy protein
14c1s94A_
96.0 15 PDB header:endocytosis/exocytosis
Chain: A: PDB Molecule:s-syntaxin;
PDBTitle: crystal structure of the habc domain of neuronal syntaxin from the2 squid loligo pealei
15d1s94a_
96.0 15 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
16c1bf5A_
95.7 9 PDB header:gene regulation/dna
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: tyrosine phosphorylated stat-1/dna complex
17c3hnwB_
95.7 7 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of a basic coiled-coil protein of unknown function2 from eubacterium eligens atcc 27750
18c3na7A_
95.7 9 PDB header:gene regulation, chaperone
Chain: A: PDB Molecule:hp0958;
PDBTitle: 2.2 angstrom structure of the hp0958 protein from helicobacter pylori2 ccug 17874
19c2d3eD_
95.3 15 PDB header:contractile protein
Chain: D: PDB Molecule:general control protein gcn4 and tropomyosin 1
PDBTitle: crystal structure of the c-terminal fragment of rabbit2 skeletal alpha-tropomyosin
20c2efrB_
95.1 17 PDB header:contractile protein
Chain: B: PDB Molecule:general control protein gcn4 and tropomyosin 1 alpha chain;
PDBTitle: crystal structure of the c-terminal tropomyosin fragment with n- and2 c-terminal extensions of the leucine zipper at 1.8 angstroms3 resolution
21c3hizB_
not modelled 94.9 17 PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit
PDBTitle: crystal structure of p110alpha h1047r mutant in complex with2 nish2 of p85alpha
22c3ol1A_
not modelled 94.7 7 PDB header:structural protein
Chain: A: PDB Molecule:vimentin;
PDBTitle: crystal structure of vimentin (fragment 144-251) from homo sapiens,2 northeast structural genomics consortium target hr4796b
23c2dq0A_
not modelled 94.7 6 PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: crystal structure of seryl-trna synthetase from pyrococcus2 horikoshii complexed with a seryl-adenylate analog
24c2b9cA_
not modelled 94.7 16 PDB header:contractile protein
Chain: A: PDB Molecule:striated-muscle alpha tropomyosin;
PDBTitle: structure of tropomyosin's mid-region: bending and binding2 sites for actin
25c3cwgA_
not modelled 94.5 9 PDB header:transcription
Chain: A: PDB Molecule:signal transducer and activator of transcription
PDBTitle: unphosphorylated mouse stat3 core fragment
26c3ipkA_
not modelled 94.5 8 PDB header:cell adhesion
Chain: A: PDB Molecule:agi/ii;
PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans
27c2wpqA_
not modelled 94.5 15 PDB header:membrane protein
Chain: A: PDB Molecule:trimeric autotransporter adhesin fragment;
PDBTitle: salmonella enterica sada 479-519 fused to gcn4 adaptors (2 sadak3, in-register fusion)
28c1bg1A_
not modelled 94.4 8 PDB header:transcription/dna
Chain: A: PDB Molecule:protein (transcription factor stat3b);
PDBTitle: transcription factor stat3b/dna complex
29c1y4cA_
not modelled 94.4 12 PDB header:de novo protein
Chain: A: PDB Molecule:maltose binding protein fused with designed
PDBTitle: designed helical protein fusion mbp
30c3vkhD_
not modelled 94.2 9 PDB header:motor protein
Chain: D: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: crystal structure of an motor protein
31c1c1gA_
not modelled 94.1 7 PDB header:contractile protein
Chain: A: PDB Molecule:tropomyosin;
PDBTitle: crystal structure of tropomyosin at 7 angstroms resolution2 in the spermine-induced crystal form
32c1l8dB_
not modelled 93.6 19 PDB header:replication
Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase;
PDBTitle: rad50 coiled-coil zn hook
33c2gl2B_
not modelled 93.3 15 PDB header:cell adhesion
Chain: B: PDB Molecule:adhesion a;
PDBTitle: crystal structure of the tetra muntant (t66g,r67g,f68g,2 y69g) of bacterial adhesin fada
34d1seta1
not modelled 93.2 9 Fold:Long alpha-hairpin
Superfamily:tRNA-binding arm
Family:Seryl-tRNA synthetase (SerRS)
35c3l9oA_
not modelled 92.9 10 PDB header:hydrolase
Chain: A: PDB Molecule:atp-dependent rna helicase dob1;
PDBTitle: crystal structure of mtr4, a co-factor of the nuclear exosome
36c4a55B_
not modelled 92.2 14 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: crystal structure of p110alpha in complex with ish2 of p85alpha and2 the inhibitor pik-108
37c3lssA_
not modelled 91.7 17 PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase;
PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp
38d1gqea_
not modelled 91.4 11 Fold:Release factor
Superfamily:Release factor
Family:Release factor
39c1jchC_
not modelled 91.2 15 PDB header:ribosome inhibitor, hydrolase
Chain: C: PDB Molecule:colicin e3;
PDBTitle: crystal structure of colicin e3 in complex with its immunity protein
40c2oevA_
not modelled 91.1 14 PDB header:protein transport
Chain: A: PDB Molecule:programmed cell death 6-interacting protein;
PDBTitle: crystal structure of alix/aip1
41c1sryB_
not modelled 90.7 10 PDB header:ligase(synthetase)
Chain: B: PDB Molecule:seryl-trna synthetase;
PDBTitle: refined crystal structure of the seryl-trna synthetase from2 thermus thermophilus at 2.5 angstroms resolution
42c3o0zD_
not modelled 90.5 17 PDB header:transferase
Chain: D: PDB Molecule:rho-associated protein kinase 1;
PDBTitle: crystal structure of a coiled-coil domain from human rock i
43c3a7pB_
not modelled 90.2 20 PDB header:protein transport
Chain: B: PDB Molecule:autophagy protein 16;
PDBTitle: the crystal structure of saccharomyces cerevisiae atg16
44c1ciiA_
not modelled 90.0 11 PDB header:transmembrane protein
Chain: A: PDB Molecule:colicin ia;
PDBTitle: colicin ia
45c3vkhB_
not modelled 89.9 6 PDB header:motor protein
Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic;
PDBTitle: crystal structure of an motor protein
46c2v71A_
not modelled 88.9 12 PDB header:nuclear protein
Chain: A: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: coiled-coil region of nudel
47c3qo8A_
not modelled 88.8 17 PDB header:ligase
Chain: A: PDB Molecule:seryl-trna synthetase, cytoplasmic;
PDBTitle: crystal structure of seryl-trna synthetase from candida albicans
48c2zdiA_
not modelled 88.8 21 PDB header:chaperone
Chain: A: PDB Molecule:prefoldin subunit beta;
PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3
49c2eqbC_
not modelled 88.6 11 PDB header:endocytosis/exocytosis
Chain: C: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the rab gtpase sec4p, the sec2p gef2 domain, and phosphate complex
50c2dfsA_
not modelled 88.5 17 PDB header:contractile protein/transport protein
Chain: A: PDB Molecule:myosin-5a;
PDBTitle: 3-d structure of myosin-v inhibited state
51c2rd0B_
not modelled 88.2 16 PDB header:transferase/oncoprotein
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: structure of a human p110alpha/p85alpha complex
52c1m1jA_
not modelled 87.0 9 PDB header:blood clotting
Chain: A: PDB Molecule:fibrinogen alpha subunit;
PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands
53c3ojaA_
not modelled 86.9 6 PDB header:protein binding
Chain: A: PDB Molecule:leucine-rich immune molecule 1;
PDBTitle: crystal structure of lrim1/apl1c complex
54c2pmsD_
not modelled 86.6 20 PDB header:metal transport, hydrolase
Chain: D: PDB Molecule:pneumococcal surface protein a (pspa);
PDBTitle: crystal structure of the complex of human lactoferrin n-lobe and2 lactoferrin-binding domain of pneumococcal surface protein a
55c2e7sM_
not modelled 86.3 11 PDB header:endocytosis/exocytosis
Chain: M: PDB Molecule:rab guanine nucleotide exchange factor sec2;
PDBTitle: crystal structure of the yeast sec2p gef domain
56c2xgjA_
not modelled 86.2 7 PDB header:hydrolase/rna
Chain: A: PDB Molecule:atp-dependent rna helicase dob1;
PDBTitle: structure of mtr4, a dexh helicase involved in nuclear rna2 processing and surveillance
57c2v66C_
not modelled 86.1 14 PDB header:structural protein
Chain: C: PDB Molecule:nuclear distribution protein nude-like 1;
PDBTitle: crystal structure of the coiled-coil domain of ndel1 (a.a.2 58 to 169)c
58c1g8xB_
not modelled 85.9 3 PDB header:structural protein
Chain: B: PDB Molecule:myosin ii heavy chain fused to alpha-actinin 3;
PDBTitle: structure of a genetically engineered molecular motor
59c1f5nA_
not modelled 85.5 11 PDB header:signaling protein
Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1;
PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp.
60c1cz7C_
not modelled 85.5 10 PDB header:contractile protein
Chain: C: PDB Molecule:microtubule motor protein ncd;
PDBTitle: the crystal structure of a minus-end directed microtubule2 motor protein ncd reveals variable dimer conformations
61c1i84V_
not modelled 84.6 14 PDB header:contractile protein
Chain: V: PDB Molecule:smooth muscle myosin heavy chain;
PDBTitle: cryo-em structure of the heavy meromyosin subfragment of2 chicken gizzard smooth muscle myosin with regulatory light3 chain in the dephosphorylated state. only c alphas4 provided for regulatory light chain. only backbone atoms5 provided for s2 fragment.
62c2i1jA_
not modelled 84.1 12 PDB header:cell adhesion, membrane protein
Chain: A: PDB Molecule:moesin;
PDBTitle: moesin from spodoptera frugiperda at 2.1 angstroms resolution
63c4dndA_
not modelled 83.9 13 PDB header:transport protein
Chain: A: PDB Molecule:syntaxin-10;
PDBTitle: crystal structure of syntaxin 10 from homo sapiens
64c2ch7A_
not modelled 82.6 10 PDB header:chemotaxis
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of the cytoplasmic domain of a bacterial2 chemoreceptor from thermotoga maritima
65c1hciB_
not modelled 81.9 7 PDB header:triple-helix coiled coil
Chain: B: PDB Molecule:alpha-actinin 2;
PDBTitle: crystal structure of the rod domain of alpha-actinin
66d1fxkc_
not modelled 81.9 16 Fold:Long alpha-hairpin
Superfamily:Prefoldin
Family:Prefoldin
67c4dylA_
not modelled 81.4 10 PDB header:transferase
Chain: A: PDB Molecule:tyrosine-protein kinase fes/fps;
PDBTitle: f-bar domain of human fes tyrosine kinase
68d1ez3a_
not modelled 80.4 13 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
69c1sjjB_
not modelled 80.4 6 PDB header:contractile protein
Chain: B: PDB Molecule:actinin;
PDBTitle: cryo-em structure of chicken gizzard smooth muscle alpha-2 actinin
70c1ik9B_
not modelled 79.8 10 PDB header:gene regulation/ligase
Chain: B: PDB Molecule:dna repair protein xrcc4;
PDBTitle: crystal structure of a xrcc4-dna ligase iv complex
71c2dnxA_
not modelled 79.1 15 PDB header:transport protein
Chain: A: PDB Molecule:syntaxin-12;
PDBTitle: solution structure of rsgi ruh-063, an n-terminal domain of2 syntaxin 12 from human cdna
72c2v1yB_
not modelled 77.7 12 PDB header:transferase
Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha;
PDBTitle: structure of a phosphoinositide 3-kinase alpha adaptor-2 binding domain (abd) in a complex with the ish2 domain3 from p85 alpha
73c1n73C_
not modelled 77.2 13 PDB header:blood clotting
Chain: C: PDB Molecule:fibrin gamma chain;
PDBTitle: fibrin d-dimer, lamprey complexed with the peptide ligand: gly-his-2 arg-pro-amide
74c1wleB_
not modelled 77.2 9 PDB header:ligase
Chain: B: PDB Molecule:seryl-trna synthetase;
PDBTitle: crystal structure of mammalian mitochondrial seryl-trna2 synthetase complexed with seryl-adenylate
75c2zdiC_
not modelled 76.2 19 PDB header:chaperone
Chain: C: PDB Molecule:prefoldin subunit alpha;
PDBTitle: crystal structure of prefoldin from pyrococcus horikoshii2 ot3
76c3pe0B_
not modelled 76.1 13 PDB header:structural protein
Chain: B: PDB Molecule:plectin;
PDBTitle: structure of the central region of the plakin domain of plectin
77c3i2wB_
not modelled 75.8 11 PDB header:endocytosis
Chain: B: PDB Molecule:syndapin;
PDBTitle: crystal structure of efc/f-bar domain of drosophila2 syndapin/pacsin
78c3hajA_
not modelled 74.4 12 PDB header:endocytosis
Chain: A: PDB Molecule:human pacsin2 f-bar;
PDBTitle: crystal structure of human pacsin2 f-bar domain (p2121212 lattice)
79c3ghgD_
not modelled 73.4 12 PDB header:blood clotting
Chain: D: PDB Molecule:fibrinogen alpha chain;
PDBTitle: crystal structure of human fibrinogen
80d1ykhb1
not modelled 72.9 17 Fold:Mediator hinge subcomplex-like
Superfamily:Mediator hinge subcomplex-like
Family:CSE2-like
81c1deqD_
not modelled 72.9 16 PDB header:
PDB COMPND:
82c1yvlB_
not modelled 72.7 7 PDB header:signaling protein
Chain: B: PDB Molecule:signal transducer and activator of transcription
PDBTitle: structure of unphosphorylated stat1
83c3m9bK_
not modelled 72.5 19 PDB header:chaperone
Chain: K: PDB Molecule:proteasome-associated atpase;
PDBTitle: crystal structure of the amino terminal coiled coil domain and the2 inter domain of the mycobacterium tuberculosis proteasomal atpase mpa
84c3kltB_
not modelled 72.0 9 PDB header:structural protein
Chain: B: PDB Molecule:vimentin;
PDBTitle: crystal structure of a vimentin fragment
85d1fioa_
not modelled 72.0 8 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
86c4aniA_
not modelled 71.7 12 PDB header:chaperone
Chain: A: PDB Molecule:protein grpe;
PDBTitle: structural basis for the intermolecular communication between2 dnak and grpe in the dnak chaperone system from3 geobacillus kaustophilus hta426
87c3errB_
not modelled 71.3 12 PDB header:ligase
Chain: B: PDB Molecule:fusion protein of microtubule binding domain from
PDBTitle: microtubule binding domain from mouse cytoplasmic dynein as2 a fusion with seryl-trna synthetase
88c3u0cA_
not modelled 70.8 11 PDB header:cell invasion
Chain: A: PDB Molecule:invasin ipab;
PDBTitle: crystal structure of n-terminal region of type iii secretion first2 translocator ipab (residues 74-224)
89c3q0xA_
not modelled 69.4 13 PDB header:structural protein
Chain: A: PDB Molecule:centriole protein;
PDBTitle: n-terminal coiled-coil dimer domain of c. reinhardtii sas-6 homolog2 bld12p
90c3oa7A_
not modelled 68.4 13 PDB header:structural protein
Chain: A: PDB Molecule:head morphogenesis protein, chaotic nuclear migration
PDBTitle: structure of the c-terminal domain of cnm67, a core component of the2 spindle pole body of saccharomyces cerevisiae
91c3peuB_
not modelled 67.3 13 PDB header:hydrolase
Chain: B: PDB Molecule:nucleoporin gle1;
PDBTitle: s. cerevisiae dbp5 l327v c-terminal domain bound to gle1 h337r and ip6
92c2qihA_
not modelled 66.6 7 PDB header:cell adhesion
Chain: A: PDB Molecule:protein uspa1;
PDBTitle: crystal structure of 527-665 fragment of uspa1 protein from2 moraxella catarrhalis
93d1lvfa_
not modelled 64.3 15 Fold:STAT-like
Superfamily:t-snare proteins
Family:t-snare proteins
94d1ivsa1
not modelled 64.2 15 Fold:Long alpha-hairpin
Superfamily:tRNA-binding arm
Family:Valyl-tRNA synthetase (ValRS) C-terminal domain
95d2ap3a1
not modelled 64.1 8 Fold:Four-helical up-and-down bundle
Superfamily:MW0975(SA0943)-like
Family:MW0975(SA0943)-like
96c3qh9A_
not modelled 61.2 19 PDB header:structural protein
Chain: A: PDB Molecule:liprin-beta-2;
PDBTitle: human liprin-beta2 coiled-coil
97c3n4xB_
not modelled 60.8 18 PDB header:replication
Chain: B: PDB Molecule:monopolin complex subunit csm1;
PDBTitle: structure of csm1 full-length
98c1gaxB_
not modelled 60.5 3 PDB header:ligase/rna
Chain: B: PDB Molecule:valyl-trna synthetase;
PDBTitle: crystal structure of thermus thermophilus valyl-trna2 synthetase complexed with trna(val) and valyl-adenylate3 analogue
99c1gk4A_
not modelled 59.2 11 PDB header:vimentin
Chain: A: PDB Molecule:vimentin;
PDBTitle: human vimentin coil 2b fragment (cys2)
100c3okqA_
not modelled 57.9 12 PDB header:protein binding
Chain: A: PDB Molecule:bud site selection protein 6;
PDBTitle: crystal structure of a core domain of yeast actin nucleation cofactor2 bud6
101c3lllA_
not modelled 55.9 12 PDB header:endocytosis
Chain: A: PDB Molecule:protein kinase c and casein kinase substrate in neurons
PDBTitle: crystal structure of mouse pacsin2 f-bar domain
102c2odvA_
not modelled 55.2 15 PDB header:structural protein
Chain: A: PDB Molecule:plectin 1;
PDBTitle: crystal structure of a fragment of the plakin domain of plectin, cys2 to ala mutant.
103d1fxka_
not modelled 54.4 17 Fold:Long alpha-hairpin
Superfamily:Prefoldin
Family:Prefoldin
104c1j1eB_
not modelled 53.8 17 PDB header:contractile protein
Chain: B: PDB Molecule:troponin t;
PDBTitle: crystal structure of the 52kda domain of human cardiac2 troponin in the ca2+ saturated form
105c1yv0T_
not modelled 52.9 15 PDB header:contractile protein
Chain: T: PDB Molecule:troponin t, fast skeletal muscle isoforms;
PDBTitle: crystal structure of skeletal muscle troponin in the ca2+-2 free state
106c2p03A_
not modelled 51.8 9 PDB header:cell adhesion
Chain: A: PDB Molecule:alpha-2-macroglobulin receptor-associated
PDBTitle: the structure of receptor-associated protein(rap)
107c3ipdB_
not modelled 51.6 11 PDB header:exocytosis
Chain: B: PDB Molecule:syntaxin-1a;
PDBTitle: helical extension of the neuronal snare complex into the2 membrane, spacegroup i 21 21 21
108c3d5cX_
not modelled 49.9 20 PDB header:ribosome
Chain: X: PDB Molecule:peptide chain release factor 1;
PDBTitle: structural basis for translation termination on the 70s ribosome. this2 file contains the 30s subunit, release factor 1 (rf1), two trna, and3 mrna molecules of the second 70s ribosome. the entire crystal4 structure contains two 70s ribosomes as described in remark 400.
109c1lwuH_
not modelled 49.3 7 PDB header:blood clotting
Chain: H: PDB Molecule:fibrinogen beta chain;
PDBTitle: crystal structure of fragment d from lamprey fibrinogen complexed with2 the peptide gly-his-arg-pro-amide
110c3m3wA_
not modelled 48.3 13 PDB header:endocytosis
Chain: A: PDB Molecule:protein kinase c and casein kinase ii substrate protein 3;
PDBTitle: crystal strcuture of mouse pacsin3 bar domain mutant
111c2ve7A_
not modelled 48.1 12 PDB header:cell cycle
Chain: A: PDB Molecule:kinetochore protein hec1, kinetochore protein spc25;
PDBTitle: crystal structure of a bonsai version of the human ndc802 complex
112d1j1ja_
not modelled 47.5 8 Fold:alpha-alpha superhelix
Superfamily:Translin
Family:Translin
113d1k4ta1
not modelled 47.3 17 Fold:Long alpha-hairpin
Superfamily:Eukaryotic DNA topoisomerase I, dispensable insert domain
Family:Eukaryotic DNA topoisomerase I, dispensable insert domain
114c3sfvB_
not modelled 47.3 19 PDB header:protein transport/protein binding
Chain: B: PDB Molecule:lida protein, substrate of the dot/icm system;
PDBTitle: crystal structure of the gdp-bound rab1a s25n mutant in complex with2 the coiled-coil domain of lida from legionella pneumophila
115c3vbbB_
not modelled 47.1 18 PDB header:ligase
Chain: B: PDB Molecule:seryl-trna synthetase, cytoplasmic;
PDBTitle: crystal structure of seryl-trna synthetase from human at 2.9 angstroms
116c3dpqE_
not modelled 46.2 11 PDB header:chaperone, peptide binding protein
Chain: E: PDB Molecule:chaperone protein dnak;
PDBTitle: crystal structure of the substrate binding domain of e.2 coli dnak in complex with a long pyrrhocoricin-derived3 inhibitor peptide (form b)
117c2d4yA_
not modelled 45.6 14 PDB header:structural protein
Chain: A: PDB Molecule:flagellar hook-associated protein 1;
PDBTitle: crystal structure of a 49k fragment of hap1 (flgk)
118c3g67A_
not modelled 45.3 13 PDB header:signaling protein
Chain: A: PDB Molecule:methyl-accepting chemotaxis protein;
PDBTitle: crystal structure of a soluble chemoreceptor from thermotoga2 maritima
119c1ekuA_
not modelled 44.6 12 PDB header:immune system
Chain: A: PDB Molecule:interferon gamma;
PDBTitle: crystal structure of a biologically active single chain2 mutant of human ifn-gamma
120c3cvfA_
not modelled 44.3 16 PDB header:signaling protein
Chain: A: PDB Molecule:homer protein homolog 3;
PDBTitle: crystal structure of the carboxy terminus of homer3

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