Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA0PJY2
DateFri May 25 09:29:34 BST 2012
Unique Job ID993c879d1f628d04

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c1tf6D_
Top template information
PDB header:transcription/dna
Chain: D: PDB Molecule:protein (transcription factor iiia);
PDBTitle: co-crystal structure of xenopus tfiiia zinc finger domain2 bound to the 5s ribosomal rna gene internal control region
Confidence and coverage
Confidence: 99.9% Coverage: 36%
169 residues ( 36% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MDSSCHNATTKMLATAPARGNMMSTSKPLAFSIERIMARTPEPKALPVPHFLQGALPKGE
Secondary structure 
SS confidence 
Disorder  ??????????????????????????????
?????????????????????????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  PKHSLHLNSSIPCMIPFVPVAYDTSPKAGVTGSEPRKASLEAPAAPAAVPSAPAFSCSDL
Secondary structure 
SS confidence 
Disorder  ?????????????
??
?
?
?????????
?
????????????????
?
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  LNCALSLKGDLARDALPLQQYKLVRPRVVNHSSFHAMGALCYLNRGDGPCHPAAGVNIHP
Secondary structure 
SS confidence 
Disorder 
?
?
?
???
???????
??
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  VASYFLSSPLHPQPKTYLAERNKLVVPAVEKYPSGVAFKDLSQAQLQHYMKESAQLLSEK
Secondary structure 
SS confidence 
Disorder  ?
?
????????
?
?
?
?
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  IAFKTSDFSRGSPNAKPKVFTCEVCGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQA
Secondary structure 
SS confidence 
Disorder 
?
?
?
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  STLCRHKIIHTQEKPHKCNQCGKAFNRSSTLNTHTRIHAGYKPFVCEFCGKGFHQKGNYK
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........370.........380.........390.........400.........410.........420
Sequence  NHKLTHSGEKQFKCNICNKAFHQVYNLTFHMHTHNDKKPFTCPTCGKGFCRNFDLKKHVR
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........430.........440.........450.........460.........470.....
Sequence  KLHDSSLGLARTPAGEPGTEPPPPLPQQPPMTLPPLQPPLPTPGPLQPGLHQGHQ
Secondary structure 
SS confidence 
Disorder 
?
?
?
???????????????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1tf6 chain D

3D model

Region: 255 - 423
Aligned: 169
Modelled: 169
Confidence: 99.9%
Identity: 20%
PDB header:transcription/dna
Chain: D: PDB Molecule:protein (transcription factor iiia);
PDBTitle: co-crystal structure of xenopus tfiiia zinc finger domain2 bound to the 5s ribosomal rna gene internal control region

Phyre2

PDB 2wbt chain A

3D model

Region: 281 - 424
Aligned: 120
Modelled: 122
Confidence: 99.9%
Identity: 22%
PDB header:dna-binding protein
Chain: A: PDB Molecule:b-129;
PDBTitle: the structure of a double c2h2 zinc finger protein from a2 hyperthermophilic archaeal virus in the absence of dna

Phyre2

PDB 2rpc chain A

3D model

Region: 238 - 403
Aligned: 146
Modelled: 146
Confidence: 99.9%
Identity: 25%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: solution structure of the tandem zf-c2h2 domains from the2 human zinc finger protein zic 3

Phyre2

PDB 2csh chain A

3D model

Region: 308 - 415
Aligned: 105
Modelled: 108
Confidence: 99.9%
Identity: 29%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 297b;
PDBTitle: solution structure of tandem repeat of the zf-c2h2 domains2 of human zinc finger protein 297b

Phyre2

PDB 2dmd chain A

3D model

Region: 309 - 402
Aligned: 94
Modelled: 94
Confidence: 99.8%
Identity: 35%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1 and 2;
PDBTitle: solution structure of the n-terminal c2h2 type zinc-binding2 domain of the zinc finger protein 64, isoforms 1 and 2

Phyre2

PDB 1x6h chain A

3D model

Region: 329 - 409
Aligned: 81
Modelled: 81
Confidence: 99.8%
Identity: 25%
PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional repressor ctcf;
PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human transcriptional repressor ctcf

Phyre2

PDB 2i13 chain A

3D model

Region: 269 - 422
Aligned: 151
Modelled: 154
Confidence: 99.8%
Identity: 43%
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:aart;
PDBTitle: aart, a six finger zinc finger designed to recognize ann triplets

Phyre2

PDB 1wjp chain A

3D model

Region: 339 - 435
Aligned: 94
Modelled: 97
Confidence: 99.8%
Identity: 16%
PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 295;
PDBTitle: solution structure of zf-c2h2 domains from human zinc2 finger protein 295

Phyre2

PDB 2ee8 chain A

3D model

Region: 303 - 403
Aligned: 101
Modelled: 101
Confidence: 99.8%
Identity: 31%
PDB header:gene regulation
Chain: A: PDB Molecule:protein odd-skipped-related 2;
PDBTitle: solution structure of three zf-c2h2 domains from mouse2 protein odd-skipped-related 2 splicing isoform 2

Phyre2

PDB 1g2d chain C

3D model

Region: 341 - 426
Aligned: 85
Modelled: 86
Confidence: 99.8%
Identity: 36%
PDB header:transcription/dna
Chain: C: PDB Molecule:tata box zinc finger protein;
PDBTitle: structure of a cys2his2 zinc finger/tata box complex (clone2 #2)

Phyre2

PDB 2dmi chain A

3D model

Region: 326 - 434
Aligned: 109
Modelled: 109
Confidence: 99.8%
Identity: 17%
PDB header:transcription
Chain: A: PDB Molecule:teashirt homolog 3;
PDBTitle: solution structure of the first and the second zf-c2h2 like2 domains of human teashirt homolog 3

Phyre2

PDB 2kmk chain A

3D model

Region: 344 - 424
Aligned: 81
Modelled: 80
Confidence: 99.7%
Identity: 36%
PDB header:dna binding protein/dna
Chain: A: PDB Molecule:zinc finger protein gfi-1;
PDBTitle: gfi-1 zinc fingers 3-5 complexed with dna

Phyre2

PDB 2cot chain A

3D model

Region: 326 - 400
Aligned: 75
Modelled: 75
Confidence: 99.7%
Identity: 31%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 435;
PDBTitle: solution structure of the first and second zf-c2h2 domain2 of zinc finger protein 435

Phyre2

PDB 2dlq chain A

3D model

Region: 310 - 426
Aligned: 117
Modelled: 117
Confidence: 99.7%
Identity: 32%
PDB header:transcription
Chain: A: PDB Molecule:gli-kruppel family member hkr3;
PDBTitle: solution structure of the tandem four zf-c2h2 domain2 repeats of murine gli-kruppel family member hkr3

Phyre2

PDB 1llm chain C

3D model

Region: 342 - 423
Aligned: 81
Modelled: 82
Confidence: 99.7%
Identity: 28%
PDB header:transcription/dna
Chain: C: PDB Molecule:chimera of zif23-gcn4;
PDBTitle: crystal structure of a zif23-gcn4 chimera bound to dna

Phyre2

PDB 2yt9 chain A

3D model

Region: 338 - 426
Aligned: 89
Modelled: 89
Confidence: 99.7%
Identity: 36%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger-containing protein 1;
PDBTitle: solution structure of c2h2 type zinc finger domain 345 in2 zinc finger protein 278

Phyre2

PDB 2lce chain A

3D model

Region: 337 - 400
Aligned: 64
Modelled: 64
Confidence: 99.7%
Identity: 39%
PDB header:transcription regulator
Chain: A: PDB Molecule:b-cell lymphoma 6 protein;
PDBTitle: chemical shift assignment of hr4436b from homo sapiens, northeast2 structural genomics consortium

Phyre2

PDB 1x6e chain A

3D model

Region: 359 - 425
Aligned: 67
Modelled: 67
Confidence: 99.7%
Identity: 36%
PDB header:dna binding protein
Chain: A: PDB Molecule:zinc finger protein 24;
PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human zinc finger protein 24

Phyre2

PDB 2d9h chain A

3D model

Region: 367 - 438
Aligned: 72
Modelled: 72
Confidence: 99.7%
Identity: 28%
PDB header:dna binding protein
Chain: A: PDB Molecule:zinc finger protein 692;
PDBTitle: solution structure of the forth and fifth zf-c2h2 domains2 of zinc finger protein 692

Phyre2

PDB 1x5w chain A

3D model

Region: 365 - 431
Aligned: 67
Modelled: 67
Confidence: 99.7%
Identity: 25%
PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1;
PDBTitle: solution structure of the c2h2 type zinc-binding domain of2 human zinc finger protein 64, isoforms 1 and 2

Phyre2
1
c1tf6D_
2
c2wbtA_
3
c2rpcA_
4
c2cshA_
5
c2dmdA_
6
c1x6hA_
7
c2i13A_
8
c1wjpA_
9
c2ee8A_
10
c1g2dC_
11
c2dmiA_
12
c2kmkA_
13
c2cotA_
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c2dlqA_
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c1llmC_
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c2yt9A_
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c2lceA_
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c1x6eA_
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c2d9hA_
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c1x5wA_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1tf6D_
99.9 20 PDB header:transcription/dna
Chain: D: PDB Molecule:protein (transcription factor iiia);
PDBTitle: co-crystal structure of xenopus tfiiia zinc finger domain2 bound to the 5s ribosomal rna gene internal control region
2c2wbtA_
99.9 22 PDB header:dna-binding protein
Chain: A: PDB Molecule:b-129;
PDBTitle: the structure of a double c2h2 zinc finger protein from a2 hyperthermophilic archaeal virus in the absence of dna
3c2rpcA_
99.9 25 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: solution structure of the tandem zf-c2h2 domains from the2 human zinc finger protein zic 3
4c2cshA_
99.9 29 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 297b;
PDBTitle: solution structure of tandem repeat of the zf-c2h2 domains2 of human zinc finger protein 297b
5c2dmdA_
99.8 35 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1 and 2;
PDBTitle: solution structure of the n-terminal c2h2 type zinc-binding2 domain of the zinc finger protein 64, isoforms 1 and 2
6c1x6hA_
99.8 25 PDB header:dna binding protein
Chain: A: PDB Molecule:transcriptional repressor ctcf;
PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human transcriptional repressor ctcf
7c2i13A_
99.8 43 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:aart;
PDBTitle: aart, a six finger zinc finger designed to recognize ann triplets
8c1wjpA_
99.8 16 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 295;
PDBTitle: solution structure of zf-c2h2 domains from human zinc2 finger protein 295
9c2ee8A_
99.8 31 PDB header:gene regulation
Chain: A: PDB Molecule:protein odd-skipped-related 2;
PDBTitle: solution structure of three zf-c2h2 domains from mouse2 protein odd-skipped-related 2 splicing isoform 2
10c1g2dC_
99.8 36 PDB header:transcription/dna
Chain: C: PDB Molecule:tata box zinc finger protein;
PDBTitle: structure of a cys2his2 zinc finger/tata box complex (clone2 #2)
11c2dmiA_
99.8 17 PDB header:transcription
Chain: A: PDB Molecule:teashirt homolog 3;
PDBTitle: solution structure of the first and the second zf-c2h2 like2 domains of human teashirt homolog 3
12c2kmkA_
99.7 36 PDB header:dna binding protein/dna
Chain: A: PDB Molecule:zinc finger protein gfi-1;
PDBTitle: gfi-1 zinc fingers 3-5 complexed with dna
13c2cotA_
99.7 31 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 435;
PDBTitle: solution structure of the first and second zf-c2h2 domain2 of zinc finger protein 435
14c2dlqA_
99.7 32 PDB header:transcription
Chain: A: PDB Molecule:gli-kruppel family member hkr3;
PDBTitle: solution structure of the tandem four zf-c2h2 domain2 repeats of murine gli-kruppel family member hkr3
15c1llmC_
99.7 28 PDB header:transcription/dna
Chain: C: PDB Molecule:chimera of zif23-gcn4;
PDBTitle: crystal structure of a zif23-gcn4 chimera bound to dna
16c2yt9A_
99.7 36 PDB header:transcription
Chain: A: PDB Molecule:zinc finger-containing protein 1;
PDBTitle: solution structure of c2h2 type zinc finger domain 345 in2 zinc finger protein 278
17c2lceA_
99.7 39 PDB header:transcription regulator
Chain: A: PDB Molecule:b-cell lymphoma 6 protein;
PDBTitle: chemical shift assignment of hr4436b from homo sapiens, northeast2 structural genomics consortium
18c1x6eA_
99.7 36 PDB header:dna binding protein
Chain: A: PDB Molecule:zinc finger protein 24;
PDBTitle: solution structures of the c2h2 type zinc finger domain of2 human zinc finger protein 24
19c2d9hA_
99.7 28 PDB header:dna binding protein
Chain: A: PDB Molecule:zinc finger protein 692;
PDBTitle: solution structure of the forth and fifth zf-c2h2 domains2 of zinc finger protein 692
20c1x5wA_
99.7 25 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 64, isoforms 1;
PDBTitle: solution structure of the c2h2 type zinc-binding domain of2 human zinc finger protein 64, isoforms 1 and 2
21c2adrA_
not modelled 99.6 34 PDB header:transcription regulation
Chain: A: PDB Molecule:adr1;
PDBTitle: adr1 dna-binding domain from saccharomyces cerevisiae, nmr,2 25 structures
22c2gliA_
not modelled 99.6 17 PDB header:transcription/dna
Chain: A: PDB Molecule:protein (five-finger gli);
PDBTitle: five-finger gli/dna complex
23c2dlkA_
not modelled 99.6 26 PDB header:dna binding protein
Chain: A: PDB Molecule:novel protein;
PDBTitle: solution structure of the first and the second zf-c2h22 domains of zinc finger protein 692
24c1tf3A_
not modelled 99.6 35 PDB header:transcription/dna
Chain: A: PDB Molecule:transcription factor iiia;
PDBTitle: tfiiia finger 1-3 bound to dna, nmr, 22 structures
25c2ebtA_
not modelled 99.6 32 PDB header:transcription
Chain: A: PDB Molecule:krueppel-like factor 5;
PDBTitle: solution structure of three tandem repeats of zf-c2h22 domains from human kruppel-like factor 5
26c2ej4A_
not modelled 99.6 19 PDB header:gene regulation
Chain: A: PDB Molecule:zinc finger protein zic 3;
PDBTitle: functional and structural basis of nuclear localization2 signal in zic3 zinc finger domain: a role of conserved3 tryptophan residue in the zinc finger domain
27c2drpD_
not modelled 99.6 29 PDB header:transcription/dna
Chain: D: PDB Molecule:protein (tramtrack dna-binding domain);
PDBTitle: the crystal structure of a two zinc-finger peptide reveals2 an extension to the rules for zinc-finger/dna recognition
28c2ct1A_
not modelled 99.6 37 PDB header:transcription
Chain: A: PDB Molecule:transcriptional repressor ctcf;
PDBTitle: solution structure of the zinc finger domain of2 transcriptional repressor ctcf protein
29d2csha1
not modelled 99.6 30 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
30c2ctdA_
not modelled 99.6 15 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 512;
PDBTitle: solution structure of two zf-c2h2 domains from human zinc2 finger protein 512
31c1un6D_
not modelled 99.6 22 PDB header:rna-binding protein/rna
Chain: D: PDB Molecule:transcription factor iiia;
PDBTitle: the crystal structure of a zinc finger - rna complex2 reveals two modes of molecular recognition
32c1f2iI_
not modelled 99.6 27 PDB header:transcription/dna
Chain: I: PDB Molecule:fusion of n-terminal 17-mer peptide extension to
PDBTitle: cocrystal structure of selected zinc finger dimer bound to2 dna
33c1bboA_
not modelled 99.5 27 PDB header:dna-binding protein
Chain: A: PDB Molecule:human enhancer-binding protein mbp-1;
PDBTitle: high-resolution solution structure of the double cys2*his22 zinc finger from the human enhancer binding protein mbp-1
34c2epaA_
not modelled 99.5 27 PDB header:transcription
Chain: A: PDB Molecule:krueppel-like factor 10;
PDBTitle: solution structure of the first and second zf-c2h2 domains2 from human krueppel-like factor 10
35c2prtA_
not modelled 99.5 33 PDB header:transcription/dna
Chain: A: PDB Molecule:wilms tumor 1;
PDBTitle: structure of the wilms tumor suppressor protein zinc finger2 domain bound to dna
36c2ghfA_
not modelled 99.4 20 PDB header:transcription, metal binding protein
Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 1;
PDBTitle: solution structure of the complete zinc-finger region of2 human zinc-fingers and homeoboxes 1 (zhx1)
37c2emcA_
not modelled 99.4 32 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 641-2 673) of human zinc finger protein 473
38c2eomA_
not modelled 99.4 29 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 341-2 373) of human zinc finger protein 95 homolog
39c2en6A_
not modelled 99.4 38 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 268;
PDBTitle: solution structure of the c2h2 type zinc finger (region 887-2 919) of human zinc finger protein 268
40c2ythA_
not modelled 99.4 36 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the c2h2 type zinc finger (region 479-2 511) of human zinc finger protein 224
41c2epzA_
not modelled 99.4 34 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the 4th c2h2 type zinc finger domain2 of zinc finger protein 28 homolog
42c1ubdC_
not modelled 99.4 31 PDB header:transcription/dna
Chain: C: PDB Molecule:protein (yy1 zinc finger domain);
PDBTitle: co-crystal structure of human yy1 zinc finger domain bound2 to the adeno-associated virus p5 initiator element
43c2ytjA_
not modelled 99.4 34 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 484;
PDBTitle: solution structure of the c2h2 type zinc finger (region 771-2 803) of human zinc finger protein 484
44c2ytmA_
not modelled 99.4 31 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 696-2 728) of human zinc finger protein 28 homolog
45c2em3A_
not modelled 99.4 36 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 640-2 672) of human zinc finger protein 28 homolog
46c2emlA_
not modelled 99.4 33 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 752-2 784) of human zinc finger protein 28 homolog
47c2gqjA_
not modelled 99.4 18 PDB header:gene regulation
Chain: A: PDB Molecule:zinc finger protein kiaa1196;
PDBTitle: solution structure of the two zf-c2h2 like domains(493-575)2 of human zinc finger protein kiaa1196
48c2epsA_
not modelled 99.4 24 PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the 4th zinc finger domain of zinc2 finger protein 278
49c1zu1A_
not modelled 99.3 12 PDB header:rna binding protein
Chain: A: PDB Molecule:rna binding protein zfa;
PDBTitle: solution structure of the n-terminal zinc fingers of the2 xenopus laevis double stranded rna binding protein zfa
50c2eovA_
not modelled 99.3 29 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 484;
PDBTitle: solution structure of the c2h2 type zinc finger (region 519-2 551) of human zinc finger protein 484
51c2em0A_
not modelled 99.3 34 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the 18th zf-c2h2 domain from human2 zinc finger protein 224
52c2emwA_
not modelled 99.3 33 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 268;
PDBTitle: solution structure of the c2h2 type zinc finger (region 301-2 331) of human zinc finger protein 268
53c2epwA_
not modelled 99.3 36 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 268;
PDBTitle: solution structure of the 24th c2h2 type zinc finger domain2 of zinc finger protein 268
54c2eq4A_
not modelled 99.3 28 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the 11th c2h2 type zinc finger domain2 of zinc finger protein 224
55c1b8tA_
not modelled 99.3 15 PDB header:contractile
Chain: A: PDB Molecule:protein (crp1);
PDBTitle: solution structure of the chicken crp1
56c2epqA_
not modelled 99.3 27 PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the third zinc finger domain of zinc2 finger protein 278
57c2eozA_
not modelled 99.3 32 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 809-2 841) of human zinc finger protein 473
58c2em4A_
not modelled 99.3 26 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 724-2 756) of human zinc finger protein 28 homolog
59c2eohA_
not modelled 99.3 26 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 28 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 780-2 812) of human zinc finger protein 28 homolog
60c2epuA_
not modelled 99.3 28 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 32;
PDBTitle: solution structure of the secound c2h2 type zinc finger2 domain of zinc finger protein 32
61c2eprA_
not modelled 99.2 33 PDB header:transcription
Chain: A: PDB Molecule:poz-, at hook-, and zinc finger-containing
PDBTitle: solution structure of the secound zinc finger domain of2 zinc finger protein 278
62c2eoqA_
not modelled 99.2 36 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the c2h2 type zinc finger (region 283-2 315) of human zinc finger protein 224
63c2yttA_
not modelled 99.2 35 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 204-2 236) of human zinc finger protein 473
64c2entA_
not modelled 99.2 29 PDB header:transcription
Chain: A: PDB Molecule:krueppel-like factor 15;
PDBTitle: solution structure of the second c2h2-type zinc finger2 domain from human krueppel-like factor 15
65c2em5A_
not modelled 99.2 24 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 768-2 800) of human zinc finger protein 95 homolog
66c2emzA_
not modelled 99.2 33 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 628-2 660) of human zinc finger protein 95 homolog
67c2ytbA_
not modelled 99.2 33 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 32;
PDBTitle: solution structure of c2h2 type zinc finger domain 5 in2 zinc finger protein 32
68c2epcA_
not modelled 99.1 25 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 32;
PDBTitle: solution structure of zinc finger domain 7 in zinc finger2 protein 32
69c2en3A_
not modelled 99.1 26 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 95 homolog;
PDBTitle: solution structure of the c2h2 type zinc finger (region 796-2 828) of human zinc finger protein 95 homolog
70c2en2A_
not modelled 99.1 33 PDB header:transcription
Chain: A: PDB Molecule:b-cell lymphoma 6 protein;
PDBTitle: solution structure of the c2h2 type zinc finger (region 598-2 626) of human b-cell lymphoma 6 protein
71d2ct1a2
not modelled 99.1 28 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
72c2ytaA_
not modelled 99.1 35 PDB header:metal binding protein
Chain: A: PDB Molecule:zinc finger protein 32;
PDBTitle: solution structure of c2h2 type zinc finger domain 3 in2 zinc finger protein 32
73c2elzA_
not modelled 99.1 29 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the 17th zf-c2h2 domain from human2 zinc finger protein 224
74d1x6ha2
not modelled 99.1 34 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
75d2epsa1
not modelled 99.1 29 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
76c2en8A_
not modelled 99.0 31 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 224;
PDBTitle: solution structure of the c2h2 type zinc finger (region 171-2 203) of human zinc finger protein 224
77c2el5A_
not modelled 99.0 32 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 268;
PDBTitle: solution structure of the 18th zf-c2h2 domain from human2 zinc finger protein 268
78c2yteA_
not modelled 99.0 28 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 484-2 512) of human zinc finger protein 473
79d1p7aa_
not modelled 99.0 30 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
80c2eoxA_
not modelled 99.0 29 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the c2h2 type zinc finger (region 315-2 345) of human zinc finger protein 473
81d2cota2
not modelled 99.0 24 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
82d2epra1
not modelled 98.9 42 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
83c2yu5A_
not modelled 98.9 32 PDB header:rna binding protein
Chain: A: PDB Molecule:zinc finger protein 473;
PDBTitle: solution structure of the zf-c2h2 domain (669-699aa) in2 zinc finger protein 473
84c2elsA_
not modelled 98.9 34 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 2nd c2h2 zinc finger of human2 zinc finger protein 406
85c2eltA_
not modelled 98.9 31 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 3rd c2h2 zinc finger of human2 zinc finger protein 406
86d2dlka2
not modelled 98.9 33 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
87c2elqA_
not modelled 98.8 37 PDB header:transcription
Chain: A: PDB Molecule:zinc finger protein 406;
PDBTitle: solution structure of the 14th c2h2 zinc finger of human2 zinc finger protein 406
88d1srka_
not modelled 98.8 24 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
89c1zw8A_
not modelled 98.8 19 PDB header:transcription
Chain: A: PDB Molecule:zinc-responsive transcriptional regulator zap1;
PDBTitle: solution structure of a zap1 zinc-responsive domain2 provides insights into metalloregulatory transcriptional3 repression in saccharomyces cerevisiae
90d1x6ea1
not modelled 98.8 39 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
91d1ncsa_
not modelled 98.7 29 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
92c1xf7A_
not modelled 98.7 34 PDB header:transcription
Chain: A: PDB Molecule:wilms' tumor protein;
PDBTitle: high resolution nmr structure of the wilms' tumor2 suppressor protein (wt1) finger 3
93d1xf7a_
not modelled 98.7 34 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
94d1u85a1
not modelled 98.7 36 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
95c1ardA_
not modelled 98.7 31 PDB header:transcription regulation
Chain: A: PDB Molecule:yeast transcription factor adr1;
PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding
96c1areA_
not modelled 98.7 31 PDB header:transcription regulation
Chain: A: PDB Molecule:yeast transcription factor adr1;
PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding
97c1arfA_
not modelled 98.6 31 PDB header:transcription regulation
Chain: A: PDB Molecule:yeast transcription factor adr1;
PDBTitle: structures of dna-binding mutant zinc finger domains:2 implications for dna binding
98d2adra1
not modelled 98.6 31 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
99c1meyG_
not modelled 98.6 43 PDB header:transferase/dna
Chain: G: PDB Molecule:consensus zinc finger;
PDBTitle: crystal structure of a designed zinc finger protein bound2 to dna
100c1va3A_
not modelled 98.6 41 PDB header:transcription
Chain: A: PDB Molecule:transcription factor sp1;
PDBTitle: solution structure of transcription factor sp1 dna binding2 domain (zinc finger 3)
101c1sp1A_
not modelled 98.6 41 PDB header:zinc finger
Chain: A: PDB Molecule:sp1f3;
PDBTitle: nmr structure of a zinc finger domain from transcription2 factor sp1f3, minimized average structure
102d1sp1a_
not modelled 98.6 41 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
103d1f2ig1
not modelled 98.6 24 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
104c1va1A_
not modelled 98.5 26 PDB header:transcription
Chain: A: PDB Molecule:transcription factor sp1;
PDBTitle: solution structure of transcription factor sp1 dna binding2 domain (zinc finger 1)
105d1a1ia2
not modelled 98.5 39 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
106c1rikA_
not modelled 98.5 39 PDB header:de novo protein
Chain: A: PDB Molecule:e6apc1 peptide;
PDBTitle: e6-binding zinc finger (e6apc1)
107d2glia3
not modelled 98.5 32 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
108d1paaa_
not modelled 98.4 33 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
109d1ubdc3
not modelled 98.4 36 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
110c2d9kA_
not modelled 98.4 17 PDB header:immune system
Chain: A: PDB Molecule:fln29 gene product;
PDBTitle: solution structure of the zf-traf domain of fln29 gene2 product
111d2cota1
not modelled 98.4 41 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
112d1llmc2
not modelled 98.4 41 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
113d1sp2a_
not modelled 98.4 34 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
114d1u86a1
not modelled 98.4 32 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
115d1tf3a2
not modelled 98.4 39 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
116c3hcsA_
not modelled 98.4 14 PDB header:signaling protein
Chain: A: PDB Molecule:tnf receptor-associated factor 6;
PDBTitle: crystal structure of the n-terminal domain of traf6
117d1a1ia3
not modelled 98.3 38 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
118d1x6ea2
not modelled 98.3 42 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
119c2xqnT_
not modelled 98.3 14 PDB header:metal-binding protein
Chain: T: PDB Molecule:testin;
PDBTitle: complex of the 2nd and 3rd lim domains of tes with the evh12 domain of mena and the n-terminal domain of actin-like protein3 arp7a
120d1aaya1
not modelled 98.2 26 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2

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Transmembrane helix prediction 

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