Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA0PG75
DateFri May 25 09:45:32 BST 2012
Unique Job ID16028dc78376965b

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c1zxuA_
Top template information
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:at5g01750 protein;
PDBTitle: x-ray structure of protein from arabidopsis thaliana2 at5g01750
Confidence and coverage
Confidence: 98.9% Coverage: 52%
141 residues ( 52% of your sequence) have been modelled with 98.9% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MASKDAQNQRRGLPGFLPGAPDPDQSLPASSNPGNQAWQLSLPLPSSFLPTVSLPPGLEY
Secondary structure 
SS confidence 
Disorder  ????????????????????????????????????????????????????????
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  LSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCSTLRSCT
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  LRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPFLPKFTIQN
Secondary structure 
SS confidence 
Disorder 
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  ANKEDILKIVGPCVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNADNFGIHV
Secondary structure 
SS confidence 
Disorder 
???
?
Disorder confidence 
 
   .........250.........260.........270.
Sequence  PADLDVTVKAAMIGACFLFDFMFFEHSLAGL
Secondary structure 
SS confidence 
Disorder 
???????
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 1zxu chain A

3D model

Region: 79 - 262
Aligned: 141
Modelled: 159
Confidence: 98.9%
Identity: 16%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:at5g01750 protein;
PDBTitle: x-ray structure of protein from arabidopsis thaliana2 at5g01750

Phyre2

PDB 2q4m chain A domain 1

3D model

Region: 79 - 262
Aligned: 141
Modelled: 159
Confidence: 98.8%
Identity: 16%
Fold: Tubby C-terminal domain-like
Superfamily: Tubby C-terminal domain-like
Family: At5g01750-like

Phyre2

PDB 1ppv chain A

3D model

Region: 87 - 136
Aligned: 47
Modelled: 50
Confidence: 40.4%
Identity: 11%
Fold: Nudix
Superfamily: Nudix
Family: IPP isomerase-like

Phyre2

PDB 3dy0 chain B

3D model

Region: 116 - 137
Aligned: 22
Modelled: 22
Confidence: 38.1%
Identity: 36%
PDB header:blood clotting, hydrolase inhibitor
Chain: B: PDB Molecule:c-terminus plasma serine protease inhibitor;
PDBTitle: crystal structure of cleaved pci bound to heparin

Phyre2

PDB 1lq8 chain H

3D model

Region: 117 - 137
Aligned: 21
Modelled: 21
Confidence: 37.1%
Identity: 38%
PDB header:blood clotting
Chain: H: PDB Molecule:plasma serine protease inhibitor;
PDBTitle: crystal structure of cleaved protein c inhibitor

Phyre2

PDB 2b26 chain A

3D model

Region: 235 - 252
Aligned: 18
Modelled: 18
Confidence: 27.3%
Identity: 22%
PDB header:chaperone/protein transport
Chain: A: PDB Molecule:sis1 protein;
PDBTitle: the crystal structure of the protein complex of yeast hsp402 sis1 and hsp70 ssa1

Phyre2

PDB 3i38 chain F

3D model

Region: 235 - 252
Aligned: 18
Modelled: 18
Confidence: 27.2%
Identity: 17%
PDB header:chaperone
Chain: F: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578

Phyre2

PDB 2qld chain A

3D model

Region: 235 - 252
Aligned: 18
Modelled: 18
Confidence: 22.2%
Identity: 17%
PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily b member 1;
PDBTitle: human hsp40 hdj1

Phyre2

PDB 1c3g chain A domain 2

3D model

Region: 235 - 252
Aligned: 18
Modelled: 18
Confidence: 20.3%
Identity: 22%
Fold: HSP40/DnaJ peptide-binding domain
Superfamily: HSP40/DnaJ peptide-binding domain
Family: HSP40/DnaJ peptide-binding domain

Phyre2

PDB 3i38 chain I

3D model

Region: 236 - 252
Aligned: 17
Modelled: 17
Confidence: 18.5%
Identity: 18%
PDB header:chaperone
Chain: I: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578

Phyre2

PDB 3i38 chain H

3D model

Region: 235 - 252
Aligned: 18
Modelled: 18
Confidence: 18.1%
Identity: 17%
PDB header:chaperone
Chain: H: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578

Phyre2

PDB 1x5w chain A domain 2

3D model

Region: 136 - 145
Aligned: 10
Modelled: 10
Confidence: 18.0%
Identity: 50%
Fold: beta-beta-alpha zinc fingers
Superfamily: beta-beta-alpha zinc fingers
Family: Classic zinc finger, C2H2

Phyre2

PDB 3i38 chain D

3D model

Region: 235 - 252
Aligned: 18
Modelled: 18
Confidence: 17.3%
Identity: 17%
PDB header:chaperone
Chain: D: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578

Phyre2

PDB 2q2g chain A

3D model

Region: 235 - 252
Aligned: 18
Modelled: 18
Confidence: 16.4%
Identity: 28%
PDB header:chaperone
Chain: A: PDB Molecule:heat shock 40 kda protein, putative (fragment);
PDBTitle: crystal structure of dimerization domain of hsp40 from2 cryptosporidium parvum, cgd2_1800

Phyre2

PDB 1msz chain A

3D model

Region: 230 - 252
Aligned: 23
Modelled: 23
Confidence: 16.3%
Identity: 13%
Fold: IF3-like
Superfamily: R3H domain
Family: R3H domain

Phyre2

PDB 1msz chain A

3D model

Region: 230 - 252
Aligned: 23
Modelled: 23
Confidence: 16.3%
Identity: 13%
PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding protein smubp-2;
PDBTitle: solution structure of the r3h domain from human smubp-2

Phyre2

PDB 3i38 chain K

3D model

Region: 235 - 252
Aligned: 18
Modelled: 18
Confidence: 15.8%
Identity: 17%
PDB header:chaperone
Chain: K: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578

Phyre2

PDB 3i38 chain L

3D model

Region: 235 - 252
Aligned: 18
Modelled: 18
Confidence: 15.7%
Identity: 17%
PDB header:chaperone
Chain: L: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578

Phyre2

PDB 3s2x chain B

3D model

Region: 195 - 224
Aligned: 27
Modelled: 30
Confidence: 15.4%
Identity: 26%
PDB header:transferase
Chain: B: PDB Molecule:acetyl-coa synthase subunit alpha;
PDBTitle: structure of acetyl-coenzyme a synthase alpha subunit c-terminal2 domain

Phyre2

PDB 3i38 chain B

3D model

Region: 235 - 252
Aligned: 18
Modelled: 18
Confidence: 15.2%
Identity: 17%
PDB header:chaperone
Chain: B: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578

Phyre2
1
c1zxuA_
2
d2q4ma1
3
d1ppva_
4
c3dy0B_
5
c1lq8H_
6
c2b26A_
7
c3i38F_
8
c2qldA_
9
d1c3ga2
10
c3i38I_
11
c3i38H_
12
d1x5wa2
13
c3i38D_
14
c2q2gA_
15
d1msza_
16
c1mszA_
17
c3i38K_
18
c3i38L_
19
c3s2xB_
20
c3i38B_
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
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79
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90



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c1zxuA_
98.9 16 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:at5g01750 protein;
PDBTitle: x-ray structure of protein from arabidopsis thaliana2 at5g01750
2d2q4ma1
98.8 16 Fold:Tubby C-terminal domain-like
Superfamily:Tubby C-terminal domain-like
Family:At5g01750-like
3d1ppva_
40.4 11 Fold:Nudix
Superfamily:Nudix
Family:IPP isomerase-like
4c3dy0B_
38.1 36 PDB header:blood clotting, hydrolase inhibitor
Chain: B: PDB Molecule:c-terminus plasma serine protease inhibitor;
PDBTitle: crystal structure of cleaved pci bound to heparin
5c1lq8H_
37.1 38 PDB header:blood clotting
Chain: H: PDB Molecule:plasma serine protease inhibitor;
PDBTitle: crystal structure of cleaved protein c inhibitor
6c2b26A_
27.3 22 PDB header:chaperone/protein transport
Chain: A: PDB Molecule:sis1 protein;
PDBTitle: the crystal structure of the protein complex of yeast hsp402 sis1 and hsp70 ssa1
7c3i38F_
27.2 17 PDB header:chaperone
Chain: F: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
8c2qldA_
22.2 17 PDB header:chaperone
Chain: A: PDB Molecule:dnaj homolog subfamily b member 1;
PDBTitle: human hsp40 hdj1
9d1c3ga2
20.3 22 Fold:HSP40/DnaJ peptide-binding domain
Superfamily:HSP40/DnaJ peptide-binding domain
Family:HSP40/DnaJ peptide-binding domain
10c3i38I_
18.5 18 PDB header:chaperone
Chain: I: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
11c3i38H_
18.1 17 PDB header:chaperone
Chain: H: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
12d1x5wa2
18.0 50 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
13c3i38D_
17.3 17 PDB header:chaperone
Chain: D: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
14c2q2gA_
16.4 28 PDB header:chaperone
Chain: A: PDB Molecule:heat shock 40 kda protein, putative (fragment);
PDBTitle: crystal structure of dimerization domain of hsp40 from2 cryptosporidium parvum, cgd2_1800
15d1msza_
16.3 13 Fold:IF3-like
Superfamily:R3H domain
Family:R3H domain
16c1mszA_
16.3 13 PDB header:dna binding protein
Chain: A: PDB Molecule:dna-binding protein smubp-2;
PDBTitle: solution structure of the r3h domain from human smubp-2
17c3i38K_
15.8 17 PDB header:chaperone
Chain: K: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
18c3i38L_
15.7 17 PDB header:chaperone
Chain: L: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
19c3s2xB_
15.4 26 PDB header:transferase
Chain: B: PDB Molecule:acetyl-coa synthase subunit alpha;
PDBTitle: structure of acetyl-coenzyme a synthase alpha subunit c-terminal2 domain
20c3i38B_
15.2 17 PDB header:chaperone
Chain: B: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
21c2k1lA_
not modelled 15.1 29 PDB header:signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3
22c2k1lB_
not modelled 15.1 29 PDB header:signaling protein
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3
23c2k1kB_
not modelled 15.1 29 PDB header:signaling protein
Chain: B: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3
24c2k1kA_
not modelled 15.1 29 PDB header:signaling protein
Chain: A: PDB Molecule:ephrin type-a receptor 1;
PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3
25c3kg6C_
not modelled 14.5 4 PDB header:lyase
Chain: C: PDB Molecule:curf;
PDBTitle: dehydratase domain from curf module of curacin polyketide synthase
26c3i38G_
not modelled 14.1 17 PDB header:chaperone
Chain: G: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
27c3i38A_
not modelled 14.1 17 PDB header:chaperone
Chain: A: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
28d1eysh1
not modelled 13.3 14 Fold:PRC-barrel domain
Superfamily:PRC-barrel domain
Family:Photosynthetic reaction centre, H-chain, cytoplasmic domain
29c3lz8A_
not modelled 13.0 17 PDB header:chaperone
Chain: A: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone dnaj from klebsiella pneumoniae2 subsp. pneumoniae mgh 78578 at 2.9 a resolution.
30d2dmda3
not modelled 12.5 44 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
31c1eysH_
not modelled 12.5 14 PDB header:electron transport
Chain: H: PDB Molecule:photosynthetic reaction center;
PDBTitle: crystal structure of photosynthetic reaction center from a2 thermophilic bacterium, thermochromatium tepidum
32c3i38C_
not modelled 12.3 17 PDB header:chaperone
Chain: C: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
33c3i38E_
not modelled 12.3 17 PDB header:chaperone
Chain: E: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
34c3i38J_
not modelled 11.6 18 PDB header:chaperone
Chain: J: PDB Molecule:putative chaperone dnaj;
PDBTitle: structure of a putative chaperone protein dnaj from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578
35d1gff1_
not modelled 11.6 22 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:ssDNA viruses
Family:Microviridae-like VP
36c3mcrA_
not modelled 10.9 22 PDB header:oxidoreductase
Chain: A: PDB Molecule:nadh dehydrogenase, subunit c;
PDBTitle: crystal structure of nadh dehydrogenase subunit c (tfu_2693) from2 thermobifida fusca yx-er1 at 2.65 a resolution
37d2i5nh1
not modelled 10.6 24 Fold:PRC-barrel domain
Superfamily:PRC-barrel domain
Family:Photosynthetic reaction centre, H-chain, cytoplasmic domain
38c1upsB_
not modelled 10.4 23 PDB header:glycosyl hydrolase
Chain: B: PDB Molecule:glcnac-alpha-1,4-gal-releasing endo-beta-
PDBTitle: glcnac[alpha]1-4gal releasing endo-[beta]-galactosidase2 from clostridium perfringens
39d1rzhh1
not modelled 10.2 16 Fold:PRC-barrel domain
Superfamily:PRC-barrel domain
Family:Photosynthetic reaction centre, H-chain, cytoplasmic domain
40c2i5nH_
not modelled 10.0 24 PDB header:photosynthesis
Chain: H: PDB Molecule:reaction center protein h chain;
PDBTitle: 1.96 a x-ray structure of photosynthetic reaction center from2 rhodopseudomonas viridis:crystals grown by microfluidic technique
41d2f1la1
not modelled 9.9 10 Fold:PRC-barrel domain
Superfamily:PRC-barrel domain
Family:RimM C-terminal domain-like
42c2pnyA_
not modelled 9.6 9 PDB header:isomerase
Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 2;
PDBTitle: structure of human isopentenyl-diphosphate delta-isomerase 2
43c3gitA_
not modelled 9.4 30 PDB header:transferase
Chain: A: PDB Molecule:carbon monoxide dehydrogenase/acetyl-coa synthase subunit
PDBTitle: crystal structure of a truncated acetyl-coa synthase
44d1c8ua2
not modelled 9.0 19 Fold:Thioesterase/thiol ester dehydrase-isomerase
Superfamily:Thioesterase/thiol ester dehydrase-isomerase
Family:Acyl-CoA thioesterase
45d1oaoc_
not modelled 8.7 27 Fold:Prismane protein-like
Superfamily:Prismane protein-like
Family:Acetyl-CoA synthase
46d1svba1
not modelled 8.6 42 Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
47c2khuA_
not modelled 8.6 45 PDB header:transferase/protein binding
Chain: A: PDB Molecule:immunoglobulin g-binding protein g, dna
PDBTitle: solution structure of the ubiquitin-binding motif of human2 polymerase iota
48d1gg3a3
not modelled 8.5 21 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:First domain of FERM
49d4znfa_
not modelled 8.2 33 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
50c3znfA_
not modelled 8.2 33 PDB header:zinc finger dna binding domain
Chain: A: PDB Molecule:zinc finger;
PDBTitle: high-resolution three-dimensional structure of a single2 zinc finger from a human enhancer binding protein in3 solution
51c4znfA_
not modelled 8.2 33 PDB header:zinc finger dna binding domain
Chain: A: PDB Molecule:zinc finger;
PDBTitle: high-resolution three-dimensional structure of a single2 zinc finger from a human enhancer binding protein in3 solution
52d1ru3a_
not modelled 8.1 27 Fold:Prismane protein-like
Superfamily:Prismane protein-like
Family:Acetyl-CoA synthase
53c3f9uA_
not modelled 7.9 11 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:putative exported cytochrome c biogenesis-related protein;
PDBTitle: crystal structure of c-terminal domain of putative exported cytochrome2 c biogenesis-related protein from bacteroides fragilis
54c1k6nH_
not modelled 7.8 16 PDB header:photosynthesis
Chain: H: PDB Molecule:photosynthetic reaction center h subunit;
PDBTitle: e(l212)a,d(l213)a double mutant structure of photosynthetic reaction2 center from rhodobacter sphaeroides
55c2l57A_
not modelled 7.4 11 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of an uncharacterized thioredoin-like protein from2 clostridium perfringens
56d2o5fa1
not modelled 7.1 11 Fold:Nudix
Superfamily:Nudix
Family:IPP isomerase-like
57c1wyjA_
not modelled 7.1 14 PDB header:cell adhesion
Chain: A: PDB Molecule:protocadherin beta 14;
PDBTitle: solution structure of mouse protocadherin beta 14 (26-137)
58d1dmla2
not modelled 7.0 18 Fold:DNA clamp
Superfamily:DNA clamp
Family:DNA polymerase processivity factor
59d1z66a1
not modelled 6.9 42 Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Class II viral fusion proteins C-terminal domain
60d2hq2a1
not modelled 6.7 35 Fold:Heme iron utilization protein-like
Superfamily:Heme iron utilization protein-like
Family:HemS/ChuS-like
61c3htrB_
not modelled 6.7 19 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized prc-barrel domain protein;
PDBTitle: crystal structure of prc-barrel domain protein from2 rhodopseudomonas palustris
62d1e0na_
not modelled 6.6 29 Fold:WW domain-like
Superfamily:WW domain
Family:WW domain
63c3isyA_
not modelled 6.6 25 PDB header:protein binding
Chain: A: PDB Molecule:intracellular proteinase inhibitor;
PDBTitle: crystal structure of an intracellular proteinase inhibitor (ipi,2 bsu11130) from bacillus subtilis at 2.61 a resolution
64c2k7iB_
not modelled 6.5 27 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:upf0339 protein atu0232;
PDBTitle: solution nmr structure of protein atu0232 from agrobacterium2 tumefaciens. northeast structural genomics consortium (nesg) target3 att3. ontario center for structural proteomics target atc0223.
65d2k7ia1
not modelled 6.5 27 Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
66c1b5fD_
not modelled 6.5 11 PDB header:hydrolase
Chain: D: PDB Molecule:protein (cardosin a);
PDBTitle: native cardosin a from cynara cardunculus l.
67d1nnxa_
not modelled 6.3 18 Fold:OB-fold
Superfamily:Hypothetical protein YgiW
Family:Hypothetical protein YgiW
68d1a1ia3
not modelled 6.2 33 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
69c2v9kA_
not modelled 6.1 7 PDB header:lyase
Chain: A: PDB Molecule:uncharacterized protein flj32312;
PDBTitle: crystal structure of human pus10, a novel pseudouridine2 synthase.
70d2k8ea1
not modelled 6.1 23 Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like
71c1meyG_
not modelled 6.1 33 PDB header:transferase/dna
Chain: G: PDB Molecule:consensus zinc finger;
PDBTitle: crystal structure of a designed zinc finger protein bound2 to dna
72d1e2ya_
not modelled 5.9 12 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
73d2hqva1
not modelled 5.9 9 Fold:Heme iron utilization protein-like
Superfamily:Heme iron utilization protein-like
Family:ChuX-like
74c1vf5R_
not modelled 5.6 33 PDB header:photosynthesis
Chain: R: PDB Molecule:protein pet l;
PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus
75d2e74e1
not modelled 5.6 33 Fold:Single transmembrane helix
Superfamily:PetL subunit of the cytochrome b6f complex
Family:PetL subunit of the cytochrome b6f complex
76c1vf5E_
not modelled 5.6 33 PDB header:photosynthesis
Chain: E: PDB Molecule:protein pet l;
PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus
77c2e74E_
not modelled 5.6 33 PDB header:photosynthesis
Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6;
PDBTitle: crystal structure of the cytochrome b6f complex from m.laminosus
78c2e75E_
not modelled 5.6 33 PDB header:photosynthesis
Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6;
PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus
79c2e76E_
not modelled 5.6 33 PDB header:photosynthesis
Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6;
PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus
80d1llmc2
not modelled 5.5 33 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
81c2ph0A_
not modelled 5.5 10 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the q6d2t7_erwct protein from erwinia2 carotovora. nesg target ewr41.
82d1m06f_
not modelled 5.5 22 Fold:Nucleoplasmin-like/VP (viral coat and capsid proteins)
Superfamily:ssDNA viruses
Family:Microviridae-like VP
83d1st9a_
not modelled 5.5 16 Fold:Thioredoxin fold
Superfamily:Thioredoxin-like
Family:Glutathione peroxidase-like
84d2aqaa1
not modelled 5.5 11 Fold:Rubredoxin-like
Superfamily:Nop10-like SnoRNP
Family:Nucleolar RNA-binding protein Nop10-like
85d1srka_
not modelled 5.4 44 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
86d2ibge1
not modelled 5.3 13 Fold:Hedgehog/DD-peptidase
Superfamily:Hedgehog/DD-peptidase
Family:Hedgehog (development protein), N-terminal signaling domain
87d1a1ia2
not modelled 5.2 33 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
88c2i6kA_
not modelled 5.1 12 PDB header:isomerase
Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 1;
PDBTitle: crystal structure of human type i ipp isomerase complexed2 with a substrate analog
89d1fnna1
not modelled 5.1 11 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:Helicase DNA-binding domain
90d2k49a2
not modelled 5.1 15 Fold:YegP-like
Superfamily:YegP-like
Family:YegP-like

Binding site prediction 

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite