Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionA0AVI4
DateFri May 25 09:55:06 BST 2012
Unique Job ID5cf7a897e3c457ee

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template d3dplr1
Top template information
Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
Confidence and coverage
Confidence: 96.8% Coverage: 19%
70 residues ( 19% of your sequence) have been modelled with 96.8% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MDSPEVTFTLAYLVFAVCFVFTPNEFHAAGLTVQNLLSGWLGSEDAAFVPFHLRRTAATL
Secondary structure 
SS confidence 
Disorder  ???
?
Disorder confidence 
 
   .........70.........80.........90.........100.........110.........120
Sequence  LCHSLLPLGYYVGMCLAASEKRLHALSQAPEAWRLFLLLAVTLPSIACILIYYWSRDRWA
Secondary structure 
SS confidence 
Disorder 
?
Disorder confidence 
 
   .........130.........140.........150.........160.........170.........180
Sequence  CHPLARTLALYALPQSGWQAVASSVNTEFRRIDKFATGAPGARVIVTDTWVMKVTTYRVH
Secondary structure 
SS confidence 
Disorder 
?
?
?
????
Disorder confidence 
 
   .........190.........200.........210.........220.........230.........240
Sequence  VAQQQDVHLTVTESRQHELSPDSNLPVQLLTIRVASTNPAVQAFDIWLNSTEYGELCEKL
Secondary structure 
SS confidence 
Disorder 
????????????
?
?
Disorder confidence 
 
   .........250.........260.........270.........280.........290.........300
Sequence  RAPIRRAAHVVIHQSLGDLFLETFASLVEVNPAYSVPSSQELEACIGCMQTRASVKLVKT
Secondary structure 
SS confidence 
Disorder 
?
???
??
???
?
Disorder confidence 
 
   .........310.........320.........330.........340.........350.........360
Sequence  CQEAATGECQQCYCRPMWCLTCMGKWFASRQDPLRPDTWLASRVPCPTCRARFCILDVCT
Secondary structure 
SS confidence 
Disorder 
????????
?
???
???
????
Disorder confidence 
 
   ..
Sequence  VR
Secondary structure 
SS confidence 
Disorder  ??
Disorder confidence 
 

Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 3dpl chain R domain 1

3D model

Region: 271 - 353
Aligned: 70
Modelled: 70
Confidence: 96.8%
Identity: 16%
Fold: RING/U-box
Superfamily: RING/U-box
Family: RING finger domain, C3HC4

Phyre2

PDB 1v87 chain A

3D model

Region: 265 - 353
Aligned: 81
Modelled: 89
Confidence: 96.4%
Identity: 11%
Fold: RING/U-box
Superfamily: RING/U-box
Family: RING finger domain, C3HC4

Phyre2

PDB 3nw0 chain A

3D model

Region: 309 - 353
Aligned: 32
Modelled: 45
Confidence: 95.5%
Identity: 41%
PDB header:metal binding protein
Chain: A: PDB Molecule:non-structural maintenance of chromosomes element 1
PDBTitle: crystal structure of mageg1 and nse1 complex

Phyre2

PDB 1vyx chain A

3D model

Region: 278 - 353
Aligned: 56
Modelled: 76
Confidence: 95.3%
Identity: 14%
Fold: RING/U-box
Superfamily: RING/U-box
Family: Variant RING domain

Phyre2

PDB 2ea6 chain A

3D model

Region: 302 - 353
Aligned: 39
Modelled: 39
Confidence: 95.1%
Identity: 33%
PDB header:transcription
Chain: A: PDB Molecule:ring finger protein 4;
PDBTitle: solution structure of the ring domain of the human ring2 finger protein 4

Phyre2

PDB 1fbv chain A

3D model

Region: 245 - 351
Aligned: 75
Modelled: 107
Confidence: 94.7%
Identity: 32%
PDB header:ligase
Chain: A: PDB Molecule:signal transduction protein cbl;
PDBTitle: structure of a cbl-ubch7 complex: ring domain function in2 ubiquitin-protein ligases

Phyre2

PDB 2ecl chain A

3D model

Region: 279 - 353
Aligned: 62
Modelled: 62
Confidence: 94.4%
Identity: 18%
PDB header:metal binding protein
Chain: A: PDB Molecule:ring-box protein 2;
PDBTitle: solution structure of the ring domain of the human ring-box2 protein 2

Phyre2

PDB 2d8s chain A

3D model

Region: 278 - 353
Aligned: 58
Modelled: 76
Confidence: 94.2%
Identity: 16%
PDB header:metal binding protein
Chain: A: PDB Molecule:cellular modulator of immune recognition;
PDBTitle: solution structure of the ring domain of the human cellular2 modulator of immune recognition protein

Phyre2

PDB 2ct0 chain A

3D model

Region: 299 - 353
Aligned: 44
Modelled: 55
Confidence: 94.1%
Identity: 34%
PDB header:gene regulation
Chain: A: PDB Molecule:non-smc element 1 homolog;
PDBTitle: solution structure of the ring domain of the non-smc2 element 1 protein

Phyre2

PDB 1x4j chain A

3D model

Region: 291 - 351
Aligned: 48
Modelled: 61
Confidence: 93.9%
Identity: 27%
PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ring finger protein 38;
PDBTitle: solution structure of ring finger in ring finger protein 38

Phyre2

PDB 2ep4 chain A

3D model

Region: 301 - 353
Aligned: 40
Modelled: 40
Confidence: 93.7%
Identity: 30%
PDB header:protein binding
Chain: A: PDB Molecule:ring finger protein 24;
PDBTitle: solution structure of ring finger from human ring finger2 protein 24

Phyre2

PDB 1e4u chain A

3D model

Region: 277 - 353
Aligned: 55
Modelled: 77
Confidence: 93.6%
Identity: 24%
Fold: RING/U-box
Superfamily: RING/U-box
Family: RING finger domain, C3HC4

Phyre2

PDB 2l0b chain A

3D model

Region: 265 - 353
Aligned: 65
Modelled: 76
Confidence: 93.3%
Identity: 22%
PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase praja-1;
PDBTitle: solution nmr structure of zinc finger domain of e3 ubiquitin-protein2 ligase praja-1 from homo sapiens, northeast structural genomics3 consortium (nesg) target hr4710b

Phyre2

PDB 2xeu chain A

3D model

Region: 304 - 353
Aligned: 37
Modelled: 37
Confidence: 93.2%
Identity: 32%
PDB header:transcription
Chain: A: PDB Molecule:ring finger protein 4;
PDBTitle: ring domain

Phyre2

PDB 2ect chain A

3D model

Region: 277 - 351
Aligned: 51
Modelled: 62
Confidence: 93.0%
Identity: 27%
PDB header:metal binding protein
Chain: A: PDB Molecule:ring finger protein 126;
PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger) domain of ring finger protein 126

Phyre2

PDB 3fl2 chain A

3D model

Region: 301 - 353
Aligned: 40
Modelled: 41
Confidence: 92.1%
Identity: 30%
PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1;
PDBTitle: crystal structure of the ring domain of the e3 ubiquitin-2 protein ligase uhrf1

Phyre2

PDB 2kiz chain A

3D model

Region: 278 - 357
Aligned: 56
Modelled: 67
Confidence: 92.1%
Identity: 20%
PDB header:metal binding protein
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase arkadia;
PDBTitle: solution structure of arkadia ring-h2 finger domain

Phyre2

PDB 2h0d chain B

3D model

Region: 301 - 357
Aligned: 45
Modelled: 57
Confidence: 90.9%
Identity: 22%
PDB header:metal binding protein/ligase
Chain: B: PDB Molecule:ubiquitin ligase protein ring2;
PDBTitle: structure of a bmi-1-ring1b polycomb group ubiquitin ligase complex

Phyre2

PDB 1g25 chain A

3D model

Region: 305 - 353
Aligned: 37
Modelled: 49
Confidence: 90.8%
Identity: 27%
Fold: RING/U-box
Superfamily: RING/U-box
Family: RING finger domain, C3HC4

Phyre2

PDB 1iym chain A

3D model

Region: 280 - 353
Aligned: 51
Modelled: 61
Confidence: 90.3%
Identity: 22%
Fold: RING/U-box
Superfamily: RING/U-box
Family: RING finger domain, C3HC4

Phyre2
1
d3dplr1
2
d1v87a_
3
c3nw0A_
4
d1vyxa_
5
c2ea6A_
6
c1fbvA_
7
c2eclA_
8
c2d8sA_
9
c2ct0A_
10
c1x4jA_
11
c2ep4A_
12
d1e4ua_
13
c2l0bA_
14
c2xeuA_
15
c2ectA_
16
c3fl2A_
17
c2kizA_
18
c2h0dB_
19
d1g25a_
20
d1iyma_
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99



Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d3dplr1
96.8 16 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
2d1v87a_
96.4 11 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
3c3nw0A_
95.5 41 PDB header:metal binding protein
Chain: A: PDB Molecule:non-structural maintenance of chromosomes element 1
PDBTitle: crystal structure of mageg1 and nse1 complex
4d1vyxa_
95.3 14 Fold:RING/U-box
Superfamily:RING/U-box
Family:Variant RING domain
5c2ea6A_
95.1 33 PDB header:transcription
Chain: A: PDB Molecule:ring finger protein 4;
PDBTitle: solution structure of the ring domain of the human ring2 finger protein 4
6c1fbvA_
94.7 32 PDB header:ligase
Chain: A: PDB Molecule:signal transduction protein cbl;
PDBTitle: structure of a cbl-ubch7 complex: ring domain function in2 ubiquitin-protein ligases
7c2eclA_
94.4 18 PDB header:metal binding protein
Chain: A: PDB Molecule:ring-box protein 2;
PDBTitle: solution structure of the ring domain of the human ring-box2 protein 2
8c2d8sA_
94.2 16 PDB header:metal binding protein
Chain: A: PDB Molecule:cellular modulator of immune recognition;
PDBTitle: solution structure of the ring domain of the human cellular2 modulator of immune recognition protein
9c2ct0A_
94.1 34 PDB header:gene regulation
Chain: A: PDB Molecule:non-smc element 1 homolog;
PDBTitle: solution structure of the ring domain of the non-smc2 element 1 protein
10c1x4jA_
93.9 27 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:ring finger protein 38;
PDBTitle: solution structure of ring finger in ring finger protein 38
11c2ep4A_
93.7 30 PDB header:protein binding
Chain: A: PDB Molecule:ring finger protein 24;
PDBTitle: solution structure of ring finger from human ring finger2 protein 24
12d1e4ua_
93.6 24 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
13c2l0bA_
93.3 22 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase praja-1;
PDBTitle: solution nmr structure of zinc finger domain of e3 ubiquitin-protein2 ligase praja-1 from homo sapiens, northeast structural genomics3 consortium (nesg) target hr4710b
14c2xeuA_
93.2 32 PDB header:transcription
Chain: A: PDB Molecule:ring finger protein 4;
PDBTitle: ring domain
15c2ectA_
93.0 27 PDB header:metal binding protein
Chain: A: PDB Molecule:ring finger protein 126;
PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger) domain of ring finger protein 126
16c3fl2A_
92.1 30 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase uhrf1;
PDBTitle: crystal structure of the ring domain of the e3 ubiquitin-2 protein ligase uhrf1
17c2kizA_
92.1 20 PDB header:metal binding protein
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase arkadia;
PDBTitle: solution structure of arkadia ring-h2 finger domain
18c2h0dB_
90.9 22 PDB header:metal binding protein/ligase
Chain: B: PDB Molecule:ubiquitin ligase protein ring2;
PDBTitle: structure of a bmi-1-ring1b polycomb group ubiquitin ligase complex
19d1g25a_
90.8 27 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
20d1iyma_
90.3 22 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
21d1ur6b_
not modelled 90.1 25 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
22d1chca_
not modelled 89.7 28 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
23c2d8tA_
not modelled 89.7 23 PDB header:metal binding protein
Chain: A: PDB Molecule:ring finger protein 146;
PDBTitle: solution structure of the ring domain of the human ring2 finger protein 146
24c2hdpB_
not modelled 89.3 30 PDB header:ligase
Chain: B: PDB Molecule:ubiquitin-protein ligase e3 mdm2;
PDBTitle: solution structure of hdm2 ring finger domain
25c3l11A_
not modelled 89.1 31 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf168;
PDBTitle: crystal structure of the ring domain of rnf168
26d1rmda2
not modelled 88.1 23 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
27c4epoL_
not modelled 87.6 32 PDB header:protein binding/ligase
Chain: L: PDB Molecule:e3 ubiquitin-protein ligase rnf8;
PDBTitle: crystal structure of rnf8 bound to the ubc13/mms2 heterodimer
28c2egpA_
not modelled 86.7 18 PDB header:antiviral protein
Chain: A: PDB Molecule:tripartite motif-containing protein 34;
PDBTitle: solution structure of the ring-finger domain from human2 tripartite motif protein 34
29c2ecnA_
not modelled 86.5 33 PDB header:metal binding protein
Chain: A: PDB Molecule:ring finger protein 141;
PDBTitle: solution structure of the ring domain of the human ring2 finger protein 141
30c2ecmA_
not modelled 86.1 17 PDB header:metal binding protein
Chain: A: PDB Molecule:ring finger and chy zinc finger domain-
PDBTitle: solution structure of the ring domain of the ring finger2 and chy zinc finger domain-containing protein 1 from mus3 musculus
31d1jm7a_
not modelled 85.9 26 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
32c2ecvA_
not modelled 85.7 18 PDB header:ligase
Chain: A: PDB Molecule:tripartite motif-containing protein 5;
PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger) domain of tripartite motif-containing protein 5
33c2cklB_
not modelled 84.6 24 PDB header:transcription
Chain: B: PDB Molecule:ubiquitin ligase protein ring2;
PDBTitle: ring1b-bmi1 e3 catalytic domain structure
34c2ecwA_
not modelled 84.4 24 PDB header:apoptosis
Chain: A: PDB Molecule:tripartite motif-containing protein 30;
PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger) domain tripartite motif protein 30
35c2yurA_
not modelled 83.5 21 PDB header:protein binding
Chain: A: PDB Molecule:retinoblastoma-binding protein 6;
PDBTitle: solution structure of the ring finger of human2 retinoblastoma-binding protein 6
36c2ct2A_
not modelled 83.5 29 PDB header:ligase
Chain: A: PDB Molecule:tripartite motif protein 32;
PDBTitle: solution structure of the ring domain of the tripartite2 motif protein 32
37c3lrqB_
not modelled 83.4 26 PDB header:ligase
Chain: B: PDB Molecule:e3 ubiquitin-protein ligase trim37;
PDBTitle: crystal structure of the u-box domain of human ubiquitin-2 protein ligase (e3), northeast structural genomics3 consortium target hr4604d.
38c2jrjA_
not modelled 83.4 16 PDB header:ligase
Chain: A: PDB Molecule:ring finger and chy zinc finger domain
PDBTitle: solution structure of the human pirh2 ring-h2 domain.2 northeast structural genomics consortium target ht2b
39c2y43B_
not modelled 83.2 29 PDB header:ligase
Chain: B: PDB Molecule:e3 ubiquitin-protein ligase rad18;
PDBTitle: rad18 ubiquitin ligase ring domain structure
40c3vk6A_
not modelled 83.1 17 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase hakai;
PDBTitle: crystal structure of a phosphotyrosine binding domain
41c2csyA_
not modelled 82.4 32 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:zinc finger protein 183-like 1;
PDBTitle: solution structure of the ring domain of the zinc finger2 protein 183-like 1
42d1fbva4
not modelled 81.9 24 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
43c1z6uA_
not modelled 80.7 32 PDB header:ligase
Chain: A: PDB Molecule:np95-like ring finger protein isoform b;
PDBTitle: np95-like ring finger protein isoform b [homo sapiens]
44c2djbA_
not modelled 79.4 20 PDB header:gene regulation
Chain: A: PDB Molecule:polycomb group ring finger protein 6;
PDBTitle: solution structure of the ring domain of the human polycomb2 group ring finger protein 6
45c2ecyA_
not modelled 78.8 30 PDB header:apoptosis
Chain: A: PDB Molecule:tnf receptor-associated factor 3;
PDBTitle: solution structure of the zinc finger, c3hc4 type (ring2 finger)" domain of tnf receptor-associated factor 3
46c2cklA_
not modelled 78.1 25 PDB header:transcription
Chain: A: PDB Molecule:polycomb group ring finger protein 4;
PDBTitle: ring1b-bmi1 e3 catalytic domain structure
47c2yslA_
not modelled 76.5 23 PDB header:protein binding
Chain: A: PDB Molecule:tripartite motif-containing protein 31;
PDBTitle: solution structure of the ring domain (1-66) from2 tripartite motif-containing protein 31
48d1jm7b_
not modelled 72.5 21 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
49c1rmdA_
not modelled 71.6 20 PDB header:dna-binding protein
Chain: A: PDB Molecule:rag1;
PDBTitle: rag1 dimerization domain
50d1bora_
not modelled 71.6 26 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
51c2eciA_
not modelled 68.6 18 PDB header:metal binding protein
Chain: A: PDB Molecule:tnf receptor-associated factor 6;
PDBTitle: solution structure of the ring domain of the human tnf2 receptor-associated factor 6 protein
52c3ztgA_
not modelled 67.3 22 PDB header:ligase
Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rbbp6;
PDBTitle: solution structure of the ring finger-like domain of2 retinoblastoma binding protein-6 (rbbp6)
53c2ea5A_
not modelled 65.4 32 PDB header:cell cycle
Chain: A: PDB Molecule:cell growth regulator with ring finger domain
PDBTitle: solution structure of the ring domain of the human cell2 growth regulator with ring finger domain 1 protein
54c3htkC_
not modelled 64.6 18 PDB header:recombination/replication/ligase
Chain: C: PDB Molecule:e3 sumo-protein ligase mms21;
PDBTitle: crystal structure of mms21 and smc5 complex
55c2yhoE_
not modelled 64.5 34 PDB header:ligase
Chain: E: PDB Molecule:e3 ubiquitin-protein ligase mylip;
PDBTitle: the idol-ube2d complex mediates sterol-dependent degradation of the2 ldl receptor
56c2vjfB_
not modelled 63.7 18 PDB header:ligase
Chain: B: PDB Molecule:mdm4 protein;
PDBTitle: crystal structure of the mdm2-mdmx ring domain heterodimer
57c3knvA_
not modelled 59.2 22 PDB header:signaling protein
Chain: A: PDB Molecule:tnf receptor-associated factor 2;
PDBTitle: crystal structure of the ring and first zinc finger domains2 of traf2
58c1x4iA_
not modelled 54.2 32 PDB header:cell adhesion
Chain: A: PDB Molecule:inhibitor of growth protein 3;
PDBTitle: solution structure of phd domain in inhibitor of growth2 protein 3 (ing3)
59d1wena_
not modelled 49.9 25 Fold:FYVE/PHD zinc finger
Superfamily:FYVE/PHD zinc finger
Family:PHD domain
60c2jmdA_
not modelled 48.5 18 PDB header:ligase
Chain: A: PDB Molecule:tnf receptor-associated factor 6;
PDBTitle: solution structure of the ring domain of human traf6
61d1t1ha_
not modelled 47.8 14 Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
62d2gsva1
not modelled 47.7 25 Fold:Open three-helical up-and-down bundle
Superfamily:YvfG-like
Family:YvfG-like
63c2ecjA_
not modelled 42.4 29 PDB header:metal binding protein
Chain: A: PDB Molecule:tripartite motif-containing protein 39;
PDBTitle: solution structure of the ring domain of the human2 tripartite motif-containing protein 39
64d1qo7a_
not modelled 41.3 15 Fold:alpha/beta-Hydrolases
Superfamily:alpha/beta-Hydrolases
Family:Epoxide hydrolase
65c3luuA_
not modelled 39.9 20 PDB header:biosynthetic protein
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of protein with unknown function which belongs to2 pfam duf971 family (afe_2189) from acidithiobacillus ferrooxidans3 atcc 23270 at 1.93 a resolution
66c2kjrA_
not modelled 39.6 18 PDB header:chaperone
Chain: A: PDB Molecule:cg11242;
PDBTitle: solution nmr structure of the n-terminal ubiquitin-like2 domain from tubulin-binding cofactor b, cg11242, from3 drosophila melanogaster. northeast structural genomics4 consortium target fr629a (residues 8-92)
67c3fybA_
not modelled 36.6 44 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:protein of unknown function (duf1244);
PDBTitle: crystal structure of a protein of unknown function (duf1244) from2 alcanivorax borkumensis
68d2c2la2
not modelled 34.9 18 Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
69c2l5uA_
not modelled 34.1 21 PDB header:metal binding protein
Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 4;
PDBTitle: structure of the first phd finger (phd1) from chd4 (mi2b)
70c2o35A_
not modelled 33.7 33 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:hypothetical protein duf1244;
PDBTitle: protein of unknown function (duf1244) from sinorhizobium meliloti
71d2o35a1
not modelled 33.7 33 Fold:SMc04008-like
Superfamily:SMc04008-like
Family:SMc04008-like
72d1hyka_
not modelled 33.7 38 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Agouti-related protein
Family:Agouti-related protein
73d2baya1
not modelled 33.0 7 Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
74d2c2vv1
not modelled 32.2 13 Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
75c3hctA_
not modelled 31.6 27 PDB header:signaling protein/ligase
Chain: A: PDB Molecule:tnf receptor-associated factor 6;
PDBTitle: crystal structure of traf6 in complex with ubc13 in the p12 space group
76c2kboA_
not modelled 31.1 25 PDB header:hydrolase
Chain: A: PDB Molecule:dna dc->du-editing enzyme apobec-3g;
PDBTitle: structure, interaction, and real-time monitoring of the2 enzymatic reaction of wild type apobec3g
77c1tdhA_
not modelled 30.9 36 PDB header:hydrolase
Chain: A: PDB Molecule:nei endonuclease viii-like 1;
PDBTitle: crystal structure of human endonuclease viii-like 1 (neil1)
78d1mr0a_
not modelled 29.9 33 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Agouti-related protein
Family:Agouti-related protein
79c2lq3A_
not modelled 29.5 33 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution nmr structure of syc0711_d from synechococcus sp., northeast2 structural genomics consortium (nesg) target snr212
80c3t6pA_
not modelled 27.9 50 PDB header:apoptosis
Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 2;
PDBTitle: iap antagonist-induced conformational change in ciap1 promotes e32 ligase activation via dimerization
81d2dlqa4
not modelled 27.8 60 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
82d1tdha3
not modelled 27.6 30 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
83d2ctda1
not modelled 27.5 29 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
84c2f42A_
not modelled 26.3 11 PDB header:chaperone
Chain: A: PDB Molecule:stip1 homology and u-box containing protein 1;
PDBTitle: dimerization and u-box domains of zebrafish c-terminal of hsp702 interacting protein
85c2ecgA_
not modelled 25.6 28 PDB header:apoptosis
Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 4;
PDBTitle: solution structure of the ring domain of the baculoviral2 iap repeat-containing protein 4 from homo sapiens
86c2ashB_
not modelled 25.3 29 PDB header:transferase
Chain: B: PDB Molecule:queuine trna-ribosyltransferase;
PDBTitle: crystal structure of queuine trna-ribosyltransferase (ec 2.4.2.29)2 (trna-guanine (tm1561) from thermotoga maritima at 1.90 a resolution
87c3ushB_
not modelled 25.2 33 PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein;
PDBTitle: crystal structure of the q2s0r5 protein from salinibacter ruber,2 northeast structural genomics consortium target srr207
88d1wgma_
not modelled 24.7 24 Fold:RING/U-box
Superfamily:RING/U-box
Family:U-box
89c1y7jA_
not modelled 24.6 56 PDB header:signaling protein
Chain: A: PDB Molecule:agouti signaling protein;
PDBTitle: nmr structure family of human agouti signalling protein (80-2 132: q115y, s124y)
90c2kreA_
not modelled 22.6 20 PDB header:protein binding
Chain: A: PDB Molecule:ubiquitin conjugation factor e4 b;
PDBTitle: solution structure of e4b/ufd2a u-box domain
91c2l6nA_
not modelled 22.2 12 PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein yp_001092504.1;
PDBTitle: nmr solution structure of the protein yp_001092504.1
92c3eb6A_
not modelled 22.1 44 PDB header:apoptosis, ligase
Chain: A: PDB Molecule:baculoviral iap repeat-containing protein 3;
PDBTitle: structure of the ciap2 ring domain bound to ubch5b
93d1r5ya_
not modelled 19.8 29 Fold:TIM beta/alpha-barrel
Superfamily:tRNA-guanine transglycosylase
Family:tRNA-guanine transglycosylase
94d2pnxa1
not modelled 19.7 29 Fold:FYVE/PHD zinc finger
Superfamily:FYVE/PHD zinc finger
Family:PHD domain
95d1j8ca_
not modelled 18.3 12 Fold:beta-Grasp (ubiquitin-like)
Superfamily:Ubiquitin-like
Family:Ubiquitin-related
96d1weua_
not modelled 18.1 29 Fold:FYVE/PHD zinc finger
Superfamily:FYVE/PHD zinc finger
Family:PHD domain
97d2k1ja1
not modelled 18.0 25 Fold:FYVE/PHD zinc finger
Superfamily:FYVE/PHD zinc finger
Family:PHD domain
98c2xzzA_
not modelled 17.9 8 PDB header:transferase
Chain: A: PDB Molecule:protein-glutamine gamma-glutamyltransferase k;
PDBTitle: crystal structure of the human transglutaminase 1 beta-barrel domain
99c2l6pA_
not modelled 17.8 20 PDB header:structure genomics, unknown function
Chain: A: PDB Molecule:phac1, phac2 and phad genes;
PDBTitle: nmr solution structure of the protein np_253742.1

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