1 c2y0mB_
89.8
43
PDB header: transcriptionChain: B: PDB Molecule: male-specific lethal 1 homolog;PDBTitle: crystal structure of the complex between dosage2 compensation factors msl1 and mof
2 c2wb6A_
53.5
70
PDB header: viral proteinChain: A: PDB Molecule: afv1-102;PDBTitle: crystal structure of afv1-102, a protein from the acidianus2 filamentous virus 1
3 d2gykb1
52.7
42
Fold: His-Me finger endonucleasesSuperfamily: His-Me finger endonucleasesFamily: HNH-motif4 c7ceiB_
50.7
42
PDB header: immune systemChain: B: PDB Molecule: protein (colicin e7 immunity protein);PDBTitle: the endonuclease domain of colicin e7 in complex with its inhibitor2 im7 protein
5 d2jb0b1
47.5
50
Fold: His-Me finger endonucleasesSuperfamily: His-Me finger endonucleasesFamily: HNH-motif6 d1r6ta1
41.0
17
Fold: S15/NS1 RNA-binding domainSuperfamily: S15/NS1 RNA-binding domainFamily: a tRNA synthase domain7 d1tafb_
39.7
18
Fold: Histone-foldSuperfamily: Histone-foldFamily: TBP-associated factors, TAFs8 c1zauA_
34.9
32
PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: adenylation domain of nad+ dependent dna ligase from2 m.tuberculosis
9 d1v9pa3
33.4
29
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: Adenylation domain of NAD+-dependent DNA ligase10 d1b04a_
30.6
40
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: Adenylation domain of NAD+-dependent DNA ligase11 c3thfA_
29.6
18
PDB header: actin-binding protein/protein bindingChain: A: PDB Molecule: protein shroom;PDBTitle: crystal structure of the sd2 domain from drosophila shroom
12 c3bacA_
27.1
39
PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: structural basis for the inhibition of bacterial nad+2 dependent dna ligase
13 d1dgsa3
25.4
29
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: Adenylation domain of NAD+-dependent DNA ligase14 d1ta8a_
24.8
42
Fold: ATP-graspSuperfamily: DNA ligase/mRNA capping enzyme, catalytic domainFamily: Adenylation domain of NAD+-dependent DNA ligase15 c2l5bA_
22.6
55
PDB header: apoptosisChain: A: PDB Molecule: activator of apoptosis harakiri;PDBTitle: solution structure of the transmembrane domain of bcl-2 member2 harakiri in micelles
16 c1dgsB_
20.2
29
PDB header: ligaseChain: B: PDB Molecule: dna ligase;PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis
17 c3m6wA_
19.2
24
PDB header: transferaseChain: A: PDB Molecule: rrna methylase;PDBTitle: multi-site-specific 16s rrna methyltransferase rsmf from thermus2 thermophilus in space group p21212 in complex with s-adenosyl-l-3 methionine
18 c3v62F_
18.6
41
PDB header: protein binding/dna binding proteinChain: F: PDB Molecule: atp-dependent dna helicase srs2;PDBTitle: structure of the s. cerevisiae srs2 c-terminal domain in complex with2 pcna conjugated to sumo on lysine 164
19 c1dipA_
18.3
19
PDB header: acetylationChain: A: PDB Molecule: delta-sleep-inducing peptide immunoreactivePDBTitle: the solution structure of porcine delta-sleep-inducing2 peptide immunoreactive peptide, nmr, 10 structures
20 c2fgtA_
16.3
56
PDB header: signaling proteinChain: A: PDB Molecule: two-component system yycf/yycg regulatoryPDBTitle: crystal structure of yych from bacillus subtilis
21 d1fyja_
not modelled
16.1
22
Fold: S15/NS1 RNA-binding domainSuperfamily: S15/NS1 RNA-binding domainFamily: a tRNA synthase domain22 c1mv4B_
not modelled
15.9
36
PDB header: de novo proteinChain: B: PDB Molecule: tropomyosin 1 alpha chain;PDBTitle: tm9a251-284: a peptide model of the c-terminus of a rat2 striated alpha tropomyosin
23 c3eb8A_
not modelled
15.8
78
PDB header: hydrolaseChain: A: PDB Molecule: cysteine protease-like vira;PDBTitle: vira
24 d1lg7a_
not modelled
15.6
20
Fold: VSV matrix proteinSuperfamily: VSV matrix proteinFamily: VSV matrix protein25 c3ee1A_
not modelled
15.3
78
PDB header: hydrolaseChain: A: PDB Molecule: effector protein vira;PDBTitle: novel fold of vira, a type iii secretion system effector protein from2 shigella flexneri
26 c3m4xA_
not modelled
13.3
24
PDB header: transferaseChain: A: PDB Molecule: nol1/nop2/sun family protein;PDBTitle: structure of a ribosomal methyltransferase
27 c3tweA_
not modelled
13.3
31
PDB header: unknown functionChain: A: PDB Molecule: alpha4h;PDBTitle: crystal structure of the de novo designed peptide alpha4h
28 c2l1qA_
not modelled
13.0
36
PDB header: antimicrobial proteinChain: A: PDB Molecule: liver-expressed antimicrobial peptide 2;PDBTitle: solution structure of human liver expressed antimicrobial peptide 2
29 c3tweB_
not modelled
12.9
31
PDB header: unknown functionChain: B: PDB Molecule: alpha4h;PDBTitle: crystal structure of the de novo designed peptide alpha4h
30 d1mzga_
not modelled
12.9
19
Fold: SufE/NifUSuperfamily: SufE/NifUFamily: SufE-like31 d1csca_
not modelled
12.3
19
Fold: Citrate synthaseSuperfamily: Citrate synthaseFamily: Citrate synthase32 c2qrlA_
not modelled
12.2
18
PDB header: oxidoreductaseChain: A: PDB Molecule: saccharopine dehydrogenase, nad+, l-lysine-PDBTitle: crystal structure of oxalylglycine-bound saccharopine2 dehydrogenase (l-lys forming) from saccharomyces cerevisiae
33 d1fx7a3
not modelled
11.7
28
Fold: SH3-like barrelSuperfamily: C-terminal domain of transcriptional repressorsFamily: FeoA-like34 d1fzya_
not modelled
10.6
36
Fold: UBC-likeSuperfamily: UBC-likeFamily: UBC-related35 d2ob5a1
not modelled
10.6
13
Fold: RbsD-likeSuperfamily: RbsD-likeFamily: RbsD-like36 c2yg8B_
not modelled
10.4
19
PDB header: hydrolaseChain: B: PDB Molecule: dna-3-methyladenine glycosidase ii, putative;PDBTitle: structure of an unusual 3-methyladenine dna glycosylase ii (2 alka) from deinococcus radiodurans
37 c1nh1A_
not modelled
10.2
13
PDB header: avirulence proteinChain: A: PDB Molecule: avirulence b protein;PDBTitle: crystal structure of the type iii effector avrb from2 pseudomonas syringae.
38 d1nh1a_
not modelled
10.2
13
Fold: Antivirulence factorSuperfamily: Antivirulence factorFamily: Antivirulence factor39 c1zg2A_
not modelled
10.1
18
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical upf0213 protein bh0048;PDBTitle: solution nmr structure of the upf0213 protein bh0048 from2 bacillus halodurans. northeast structural genomics target3 bhr2.
40 c2djvA_
not modelled
9.9
27
PDB header: protein bindingChain: A: PDB Molecule: methionyl-trna synthetase;PDBTitle: solution structures of the whep-trs domain of human2 methionyl-trna synthetase
41 d2f76x1
not modelled
9.3
27
Fold: Retroviral matrix proteinsSuperfamily: Retroviral matrix proteinsFamily: Mason-Pfizer monkey virus matrix protein42 d1d2da_
not modelled
9.3
24
Fold: S15/NS1 RNA-binding domainSuperfamily: S15/NS1 RNA-binding domainFamily: a tRNA synthase domain43 c3bvhE_
not modelled
9.2
21
PDB header: blood clottingChain: E: PDB Molecule: fibrinogen beta chain;PDBTitle: crystal structure of recombinant gammad364a fibrinogen fragment d with2 the peptide ligand gly-pro-arg-pro-amide
44 c2hinA_
not modelled
9.1
50
PDB header: transcriptionChain: A: PDB Molecule: repressor protein;PDBTitle: structure of n15 cro at 1.05 a: an ortholog of lambda cro2 with a completely different but equally effective3 dimerization mechanism
45 c2frxD_
not modelled
9.0
14
PDB header: transferaseChain: D: PDB Molecule: hypothetical protein yebu;PDBTitle: crystal structure of yebu, a m5c rna methyltransferase from e.coli
46 d1n7va_
not modelled
8.8
29
Fold: Adsorption protein p2Superfamily: Adsorption protein p2Family: Adsorption protein p247 d1v1oa2
not modelled
8.6
36
Fold: beta-Grasp (ubiquitin-like)Superfamily: Superantigen toxins, C-terminal domainFamily: Superantigen toxins, C-terminal domain48 c3dxeB_
not modelled
8.5
48
PDB header: protein bindingChain: B: PDB Molecule: amyloid beta a4 protein;PDBTitle: crystal structure of the intracellular domain of human app2 (t668a mutant) in complex with fe65-ptb2
49 c3fg9B_
not modelled
8.3
45
PDB header: structural genomics, unknown functionChain: B: PDB Molecule: protein of universal stress protein uspa family;PDBTitle: the crystal structure of an universal stress protein uspa2 family protein from lactobacillus plantarum wcfs1
50 c2cxiA_
not modelled
8.3
26
PDB header: ligaseChain: A: PDB Molecule: phenylalanyl-trna synthetase beta chain;PDBTitle: crystal structure of an n-terminal fragment of the phenylalanyl-trna2 synthetase beta-subunit from pyrococcus horikoshii
51 d1uuja_
not modelled
8.3
29
Fold: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domainSuperfamily: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domainFamily: Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain52 d1mwpa_
not modelled
8.1
33
Fold: SRCR-likeSuperfamily: A heparin-binding domainFamily: A heparin-binding domain53 c1nh2C_
not modelled
8.1
33
PDB header: transcription/dnaChain: C: PDB Molecule: transcription initiation factor iia large chain;PDBTitle: crystal structure of a yeast tfiia/tbp/dna complex
54 d1nh2c_
not modelled
8.1
33
Fold: Transcription factor IIA (TFIIA), beta-barrel domainSuperfamily: Transcription factor IIA (TFIIA), beta-barrel domainFamily: Transcription factor IIA (TFIIA), beta-barrel domain55 c3jslA_
not modelled
8.0
14
PDB header: ligaseChain: A: PDB Molecule: dna ligase;PDBTitle: crystal structure of the adenylation domain of nad+-2 dependent dna ligase from staphylococcus aureus
56 c2x9oA_
not modelled
7.8
25
PDB header: oxidoreductaseChain: A: PDB Molecule: 15,16- dihydrobiliverdin-ferredoxin oxidoreductase;PDBTitle: structure of 15, 16- dihydrobiliverdin:ferredoxin2 oxidoreductase (peba)
57 c2g18K_
not modelled
7.6
5
PDB header: oxidoreductaseChain: K: PDB Molecule: phycocyanobilin:ferredoxin oxidoreductase;PDBTitle: crystal structure of nostoc sp. 7120 phycocyanobilin:ferredoxin2 oxidoreductase (pcya) apoprotein
58 c3ktmB_
not modelled
7.6
33
PDB header: cell adhesion, signaling proteinChain: B: PDB Molecule: amyloid beta a4 protein;PDBTitle: structure of the heparin-induced e1-dimer of the amyloid precursor2 protein (app)
59 c3ec8A_
not modelled
7.1
42
PDB header: cell adhesionChain: A: PDB Molecule: putative uncharacterized protein flj10324;PDBTitle: the crystal structure of the ra domain of flj10324 (radil)
60 c2w2rA_
not modelled
7.0
14
PDB header: viral proteinChain: A: PDB Molecule: matrix protein;PDBTitle: structure of the vesicular stomatitis virus matrix protein
61 c2jvhA_
not modelled
7.0
19
PDB header: immune systemChain: A: PDB Molecule: igg-binding protein sbi;PDBTitle: structure of c3-binding domain 4 of s. aureus protein sbi
62 c2z5hB_
not modelled
6.9
33
PDB header: contractile proteinChain: B: PDB Molecule: general control protein gcn4 and tropomyosinPDBTitle: crystal structure of the head-to-tail junction of2 tropomyosin complexed with a fragment of tnt
63 d2z8la2
not modelled
6.6
27
Fold: beta-Grasp (ubiquitin-like)Superfamily: Superantigen toxins, C-terminal domainFamily: Superantigen toxins, C-terminal domain64 c2ao9H_
not modelled
6.6
16
PDB header: structural genomics, unknown functionChain: H: PDB Molecule: phage protein;PDBTitle: structural genomics, the crystal structure of a phage protein2 (phbc6a51) from bacillus cereus atcc 14579
65 c3d5jB_
not modelled
6.6
26
PDB header: oxidoreductaseChain: B: PDB Molecule: glutaredoxin-2, mitochondrial;PDBTitle: structure of yeast grx2-c30s mutant with glutathionyl mixed disulfide
66 c3h0gA_
not modelled
6.6
39
PDB header: transcriptionChain: A: PDB Molecule: dna-directed rna polymerase ii subunit rpb1;PDBTitle: rna polymerase ii from schizosaccharomyces pombe
67 c3f2rA_
not modelled
6.3
28
PDB header: transferaseChain: A: PDB Molecule: choline kinase alpha;PDBTitle: crystal structure of human choline kinase alpha in complex2 with hemicholinium-3
68 d2hrkb1
not modelled
6.3
16
Fold: GST C-terminal domain-likeSuperfamily: GST C-terminal domain-likeFamily: Arc1p N-terminal domain-like69 c2wjvE_
not modelled
6.3
40
PDB header: hydrolaseChain: E: PDB Molecule: regulator of nonsense transcripts 2;PDBTitle: crystal structure of the complex between human nonsense2 mediated decay factors upf1 and upf2
70 c2v1lA_
not modelled
6.2
57
PDB header: unknown functionChain: A: PDB Molecule: hypothetical protein;PDBTitle: structure of the conserved hypothetical protein vc1805 from2 pathogenicity island vpi-2 of vibrio cholerae o1 biovar3 eltor str. n16961 shares structural homology with the4 human p32 protein
71 c2wcuB_
not modelled
6.1
15
PDB header: isomeraseChain: B: PDB Molecule: protein fucu homolog;PDBTitle: crystal structure of mammalian fucu
72 c3cuxA_
not modelled
6.0
43
PDB header: transferaseChain: A: PDB Molecule: malate synthase;PDBTitle: atomic resolution structures of escherichia coli and2 bacillis anthracis malate synthase a: comparison with3 isoform g and implications for structure based drug design
73 c1ywlA_
not modelled
6.0
8
PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical upf0213 protein ef2693;PDBTitle: solution nmr structure of the protein ef2693 from e.2 faecalis: northeast structural genomics consortium target3 efr36
74 d1eg3a1
not modelled
6.0
38
Fold: EF Hand-likeSuperfamily: EF-handFamily: EF-hand modules in multidomain proteins75 c3lx6B_
not modelled
6.0
20
PDB header: transferaseChain: B: PDB Molecule: cytosine-specific methyltransferase;PDBTitle: crystal structure of putative dna cytosine methylase from shigella2 flexneri 2a str. 2457t
76 c3iydD_
not modelled
5.9
14
PDB header: transcription/dnaChain: D: PDB Molecule: dna-directed rna polymerase subunit beta;PDBTitle: three-dimensional em structure of an intact activator-dependent2 transcription initiation complex
77 c2q6qB_
not modelled
5.9
67
PDB header: cell cycleChain: B: PDB Molecule: spindle pole body component spc42;PDBTitle: crystal structure of spc42p, a critical component of spindle pole body2 in budding yeast
78 d1axib1
not modelled
5.8
43
Fold: Immunoglobulin-like beta-sandwichSuperfamily: Fibronectin type IIIFamily: Fibronectin type III79 d1nhpa3
not modelled
5.8
15
Fold: CO dehydrogenase flavoprotein C-domain-likeSuperfamily: FAD/NAD-linked reductases, dimerisation (C-terminal) domainFamily: FAD/NAD-linked reductases, dimerisation (C-terminal) domain80 c2l1uA_
not modelled
5.8
12
PDB header: oxidoreductaseChain: A: PDB Molecule: methionine-r-sulfoxide reductase b2, mitochondrial;PDBTitle: structure-functional analysis of mammalian msrb2 protein
81 c2w56B_
not modelled
5.7
43
PDB header: unknown functionChain: B: PDB Molecule: vc0508;PDBTitle: structure of the hypothetical protein vc0508 from vibrio cholerae2 vsp-ii pathogenicity island
82 c2f9jP_
not modelled
5.7
36
PDB header: rna binding proteinChain: P: PDB Molecule: splicing factor 3b subunit 1;PDBTitle: 3.0 angstrom resolution structure of a y22m mutant of the spliceosomal2 protein p14 bound to a region of sf3b155
83 c2k58B_
not modelled
5.7
26
PDB header: transport proteinChain: B: PDB Molecule: neuronal acetylcholine receptor subunit beta-2;PDBTitle: nmr structures of the first transmembrane domain of the2 neuronal acetylcholine receptor beta 2 subunit
84 d1eita_
not modelled
5.7
100
Fold: Knottins (small inhibitors, toxins, lectins)Superfamily: omega toxin-likeFamily: Spider toxins85 d2qdyb1
not modelled
5.7
25
Fold: SH3-like barrelSuperfamily: Electron transport accessory proteinsFamily: Nitrile hydratase beta chain86 c1z9vA_
not modelled
5.5
30
PDB header: unknown functionChain: A: PDB Molecule: conserved hypothetical protein mth0776;PDBTitle: solution structure of mth0776 from methanobacterium2 thermoautotrophicum (strain h)
87 c3ax1A_
not modelled
5.5
9
PDB header: protein bindingChain: A: PDB Molecule: serrate rna effector molecule;PDBTitle: molecular insights into mirna processing by arabidopsis serrate
88 d1yh2a1
not modelled
5.5
36
Fold: UBC-likeSuperfamily: UBC-likeFamily: UBC-related89 c1x4qA_
not modelled
5.4
43
PDB header: rna binding proteinChain: A: PDB Molecule: u4/u6 small nuclear ribonucleoprotein prp3;PDBTitle: solution structure of pwi domain in u4/u6 small nuclear2 ribonucleoprotein prp3(hprp3)
90 d1qrjb1
not modelled
5.3
16
Fold: Acyl carrier protein-likeSuperfamily: Retrovirus capsid dimerization domain-likeFamily: Retrovirus capsid protein C-terminal domain91 c1v1oB_
not modelled
5.3
36
PDB header: virulence factorChain: B: PDB Molecule: exotoxin 1;PDBTitle: staphylococcal superantigen-like protein 7
92 c2k72A_
not modelled
5.3
33
PDB header: hydrolaseChain: A: PDB Molecule: matrix metalloproteinase-23;PDBTitle: solution nmr structure of toxin-like potassium channel2 blocking domain in mmp23
93 d2etda1
not modelled
5.3
14
Fold: Bromodomain-likeSuperfamily: LemA-likeFamily: LemA-like94 d2tssa2
not modelled
5.3
36
Fold: beta-Grasp (ubiquitin-like)Superfamily: Superantigen toxins, C-terminal domainFamily: Superantigen toxins, C-terminal domain95 c4dzoA_
not modelled
5.3
29
PDB header: cell cycleChain: A: PDB Molecule: mitotic spindle assembly checkpoint protein mad1;PDBTitle: structure of human mad1 c-terminal domain reveals its involvement in2 kinetochore targeting
96 d2eiaa1
not modelled
5.2
16
Fold: Acyl carrier protein-likeSuperfamily: Retrovirus capsid dimerization domain-likeFamily: Retrovirus capsid protein C-terminal domain97 c2w4rB_
not modelled
5.1
23
PDB header: hydrolaseChain: B: PDB Molecule: probable atp-dependent rna helicase dhx58;PDBTitle: crystal structure of the regulatory domain of human lgp2
98 c2b9sA_
not modelled
5.1
8
PDB header: isomerase/dnaChain: A: PDB Molecule: topoisomerase i-like protein;PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex
99 c3l4nA_
not modelled
5.1
20
PDB header: oxidoreductaseChain: A: PDB Molecule: monothiol glutaredoxin-6;PDBTitle: crystal structure of yeast monothiol glutaredoxin grx6
