Phyre 2 Results for A0A183

Email	l.a.kelley@imperial.ac.uk
Description	A0A183
Date	Tue Apr 3 14:37:07 BST 2012
Unique Job ID	d0ceb6f85ab3388e

Summary

Top model

Image coloured by rainbow N → C terminus

Model (left) based on template c2xskA_

Top template information

PDB header:chaperone
Chain: A: PDB Molecule:csgc;
PDBTitle: e. coli curli protein csgc - secys

Confidence and coverage

Confidence:

19.7%

Coverage:

18%

14 residues ( 18% of your sequence) have been modelled with 19.7% confidence by the single highest scoring template.

You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.

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Warning: 70% of your sequence is predicted disordered. Disordered regions cannot be meaningfully predicted.

3D viewing

Interactive 3D view in Jmol

Sequence analysis

Secondary structure and disorder prediction

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60

Sequence M S Q Q K Q Q S W K P P N V P K C S P P Q R S N P C L A P Y S T P C G A P H S E G C H S S S Q R P E V Q K P R R A R Q K

Secondary structure

SS confidence

Disorder ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
? ?
?
? ?
?
? ?
? ? ? ? ? ?
? ? ? ? ? ? ? ? ? ? ?

Disorder confidence

. . . . . . . . . 70 . . . . . . . . . 80

Sequence L R C L S R G T T Y H C K E E E C E G D

Secondary structure

SS confidence

Disorder ?
? ?
?
? ? ? ? ? ? ? ? ?

Disorder confidence

Confidence Key
High(9) Low (0)

? Disordered

Alpha helix

Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank	Aligned region

PDB 2xsk chain A

Region: 3 - 16
Aligned: 14
Modelled: 14
Confidence: 19.7%
Identity: 29%
PDB header:chaperone
Chain: A: PDB Molecule:csgc;
PDBTitle: e. coli curli protein csgc - secys

Phyre2

PDB 3r67 chain A

Region: 9 - 32
Aligned: 24
Modelled: 24
Confidence: 12.0%
Identity: 25%
PDB header:hydrolase
Chain: A: PDB Molecule:putative glycosidase;
PDBTitle: crystal structure of a putative glycosidase (bt_4094) from bacteroides2 thetaiotaomicron vpi-5482 at 2.30 a resolution

Phyre2

PDB 1a7i chain A domain 1

Region: 66 - 79
Aligned: 14
Modelled: 14
Confidence: 10.8%
Identity: 43%
Fold: Glucocorticoid receptor-like (DNA-binding domain)
Superfamily: Glucocorticoid receptor-like (DNA-binding domain)
Family: LIM domain

Phyre2

c2xskA_

c3r67A_

d1a7ia1