Phyre Home Retrieve Phyre Job Id
Emaill.a.kelley@imperial.ac.uk
DescriptionQ8IMZ4
DateTue Jan 22 11:40:51 GMT 2013
Unique Job ID5578b042ca54f837

Summary 

Top model
Image coloured by rainbow N → C terminus
Model (left) based on template c2rmnA_
Top template information
PDB header:cell cycle, antitumor protein
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: the solution structure of the p63 dna-binding domain
Confidence and coverage
Confidence:100.0% Coverage: 41%
203 residues ( 41% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
279 residues ( 56%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis 

Secondary structure and disorder prediction 

   1........10.........20.........30.........40.........50.........60
Sequence  MSLHKSASFSLTFNQNTSIVSRSNSRTIFEAFKEFLDFWDIGNEVSAESAVRVSSNGAFN
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Disorder  ???????








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   .........70.........80.........90.........100.........110.........120
Sequence  LPQSFGNESNEYAHLATPVDPAYGGNNTNNMMQFTNNLEILANNNSDGNNKINACNKFVC
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Disorder  ?????????








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   .........130.........140.........150.........160.........170.........180
Sequence  HKGTDSEDDSTEVDIKEDIPKTVEVSGSELTTEPMAFLQGLNSGNLMQFSQQSVLREMML
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Disorder 



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   .........190.........200.........210.........220.........230.........240
Sequence  QDIQIQANTLPKLENHNIGGYCFSMVLDEPPKSLWMYSIPLNKLYIRMNKAFNVDVQFKS
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??
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   .........250.........260.........270.........280.........290.........300
Sequence  KMPIQPLNLRVFLCFSNDVSAPVVRCQNHLSVEPLTANNAKMRESLLRSENPNSVYCGNA
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   .........310.........320.........330.........340.........350.........360
Sequence  QGKGISERFSVVVPLNMSRSVTRSGLTRQTLAFKFVCQNSCIGRKETSLVFCLEKACGDI
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   .........370.........380.........390.........400.........410.........420
Sequence  VGQHVIHVKICTCPKRDRIQDERQLNSKKRKSVPEAAEEDEPSKVRRCIAIKTEDTESND
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?????

?????????????????????????????????????
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   .........430.........440.........450.........460.........470.........480
Sequence  SRDCDDSAAEWNVSRTPDGDYRLAITCPNKEWLLQSIEGMIKEAAAEVLRNPNQENLRRH
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???
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   .........490.....
Sequence  ANKLLSLKKRAYELP
Secondary structure 

SS confidence 














Disorder 










????
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Confidence Key
High(9)                    Low (0)
?Disordered
Alpha helix
Beta strand

Domain analysis 

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

RankAligned region

PDB 2rmn chain A

3D model

Region: 180 - 392
Aligned: 203
Modelled: 213
Confidence: 100.0%
Identity: 24%
PDB header:cell cycle, antitumor protein
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: the solution structure of the p63 dna-binding domain

Phyre2

PDB 2xip chain A

3D model

Region: 187 - 389
Aligned: 194
Modelled: 203
Confidence: 100.0%
Identity: 27%
PDB header:cell cycle
Chain: A: PDB Molecule:tumour protein p73;
PDBTitle: crystal structure of the dna binding domain of human tp732 refined at 1.8 a resolution

Phyre2

PDB 3q06 chain B

3D model

Region: 188 - 392
Aligned: 191
Modelled: 205
Confidence: 100.0%
Identity: 28%
PDB header:cell cycle/dna
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity

Phyre2

PDB 2ac0 chain A domain 1

3D model

Region: 189 - 385
Aligned: 185
Modelled: 197
Confidence: 100.0%
Identity: 26%
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: p53-like transcription factors
Family: p53 DNA-binding domain-like

Phyre2

PDB 2j1x chain A

3D model

Region: 189 - 385
Aligned: 185
Modelled: 197
Confidence: 100.0%
Identity: 27%
PDB header:nuclear protein
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: human p53 core domain mutant m133l-v203a-y220c-n239y-n268d

Phyre2

PDB 1hu8 chain A

3D model

Region: 197 - 383
Aligned: 176
Modelled: 187
Confidence: 100.0%
Identity: 28%
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: p53-like transcription factors
Family: p53 DNA-binding domain-like

Phyre2

PDB 2rp4 chain C

3D model

Region: 425 - 495
Aligned: 71
Modelled: 71
Confidence: 100.0%
Identity: 100%
PDB header:transcription
Chain: C: PDB Molecule:transcription factor p53;
PDBTitle: solution structure of the oligomerization domain in dmp53

Phyre2

PDB 1t4w chain A

3D model

Region: 224 - 389
Aligned: 149
Modelled: 166
Confidence: 98.5%
Identity: 21%
Fold: Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily: p53-like transcription factors
Family: p53 DNA-binding domain-like

Phyre2

PDB 2kum chain A

3D model

Region: 348 - 396
Aligned: 37
Modelled: 49
Confidence: 52.5%
Identity: 16%
PDB header:signaling protein
Chain: A: PDB Molecule:c-c motif chemokine 27;
PDBTitle: solution structure of the human chemokine ccl27

Phyre2

PDB 1eig chain A

3D model

Region: 348 - 394
Aligned: 36
Modelled: 47
Confidence: 37.0%
Identity: 33%
Fold: IL8-like
Superfamily: Interleukin 8-like chemokines
Family: Interleukin 8-like chemokines

Phyre2

PDB 1esr chain A

3D model

Region: 348 - 394
Aligned: 36
Modelled: 47
Confidence: 34.2%
Identity: 25%
Fold: IL8-like
Superfamily: Interleukin 8-like chemokines
Family: Interleukin 8-like chemokines

Phyre2

PDB 2jq3 chain A

3D model

Region: 35 - 53
Aligned: 19
Modelled: 19
Confidence: 30.8%
Identity: 47%
PDB header:lipid binding protein
Chain: A: PDB Molecule:apolipoprotein c-iii;
PDBTitle: structure and dynamics of human apolipoprotein c-iii

Phyre2

PDB 1t6c chain A domain 1

3D model

Region: 25 - 57
Aligned: 33
Modelled: 33
Confidence: 23.8%
Identity: 18%
Fold: Ribonuclease H-like motif
Superfamily: Actin-like ATPase domain
Family: Ppx/GppA phosphatase

Phyre2

PDB 2jo1 chain A

3D model

Region: 386 - 407
Aligned: 22
Modelled: 22
Confidence: 22.9%
Identity: 32%
PDB header:hydrolase regulator
Chain: A: PDB Molecule:phospholemman;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles

Phyre2

PDB 2eot chain A

3D model

Region: 348 - 394
Aligned: 36
Modelled: 47
Confidence: 20.6%
Identity: 31%
Fold: IL8-like
Superfamily: Interleukin 8-like chemokines
Family: Interleukin 8-like chemokines

Phyre2

PDB 2zou chain B

3D model

Region: 115 - 259
Aligned: 121
Modelled: 136
Confidence: 19.8%
Identity: 14%
PDB header:cell adhesion
Chain: B: PDB Molecule:spondin-1;
PDBTitle: crystal struture of human f-spondin reeler domain (fragment 2)

Phyre2

PDB 2b5d chain X domain 1

3D model

Region: 451 - 494
Aligned: 40
Modelled: 44
Confidence: 19.3%
Identity: 18%
Fold: immunoglobulin/albumin-binding domain-like
Superfamily: Families 57/38 glycoside transferase middle domain
Family: AmyC C-terminal domain-like

Phyre2

PDB 2xzb chain B

3D model

Region: 183 - 232
Aligned: 50
Modelled: 50
Confidence: 18.5%
Identity: 14%
PDB header:hydrolase
Chain: B: PDB Molecule:potassium-transporting atpase subunit beta;
PDBTitle: pig gastric h,k-atpase with bound bef and sch28080

Phyre2

PDB 1rjj chain A

3D model

Region: 134 - 182
Aligned: 49
Modelled: 49
Confidence: 18.4%
Identity: 12%
Fold: Ferredoxin-like
Superfamily: Dimeric alpha+beta barrel
Family: Plant stress-induced protein

Phyre2

PDB 3gyc chain B

3D model

Region: 368 - 374
Aligned: 7
Modelled: 7
Confidence: 18.0%
Identity: 29%
PDB header:hydrolase
Chain: B: PDB Molecule:putative glycoside hydrolase;
PDBTitle: crystal structure of putative glycoside hydrolase (yp_001304622.1)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution

Phyre2
1

c2rmnA_
2

c2xipA_
3

c3q06B_
4

d2ac0a1
5

c2j1xA_
6

d1hu8a_
7

c2rp4C_
8

d1t4wa_
9

c2kumA_
10

d1eiga_
11

d1esra_
12

c2jq3A_
13

d1t6ca1
14

c2jo1A_
15

d2eota_
16

c2zouB_
17

d2b5dx1
18

c2xzbB_
19

d1rjja_
20

c3gycB_
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Detailed template information 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1c2rmnA_



100.0 24 PDB header:cell cycle, antitumor protein
Chain: A: PDB Molecule:tumor protein 63;
PDBTitle: the solution structure of the p63 dna-binding domain
2c2xipA_



100.0 27 PDB header:cell cycle
Chain: A: PDB Molecule:tumour protein p73;
PDBTitle: crystal structure of the dna binding domain of human tp732 refined at 1.8 a resolution
3c3q06B_



100.0 28 PDB header:cell cycle/dna
Chain: B: PDB Molecule:cellular tumor antigen p53;
PDBTitle: an induced fit mechanism regulates p53 dna binding kinetics to confer2 sequence specificity
4d2ac0a1



100.0 26 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:p53-like transcription factors
Family:p53 DNA-binding domain-like
5c2j1xA_



100.0 27 PDB header:nuclear protein
Chain: A: PDB Molecule:cellular tumor antigen p53;
PDBTitle: human p53 core domain mutant m133l-v203a-y220c-n239y-n268d
6d1hu8a_



100.0 28 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:p53-like transcription factors
Family:p53 DNA-binding domain-like
7c2rp4C_



100.0 100 PDB header:transcription
Chain: C: PDB Molecule:transcription factor p53;
PDBTitle: solution structure of the oligomerization domain in dmp53
8d1t4wa_



98.5 21 Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f
Superfamily:p53-like transcription factors
Family:p53 DNA-binding domain-like
9c2kumA_



52.5 16 PDB header:signaling protein
Chain: A: PDB Molecule:c-c motif chemokine 27;
PDBTitle: solution structure of the human chemokine ccl27
10d1eiga_



37.0 33 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
11d1esra_



34.2 25 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
12c2jq3A_



30.8 47 PDB header:lipid binding protein
Chain: A: PDB Molecule:apolipoprotein c-iii;
PDBTitle: structure and dynamics of human apolipoprotein c-iii
13d1t6ca1



23.8 18 Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Ppx/GppA phosphatase
14c2jo1A_



22.9 32 PDB header:hydrolase regulator
Chain: A: PDB Molecule:phospholemman;
PDBTitle: structure of the na,k-atpase regulatory protein fxyd1 in2 micelles
15d2eota_



20.6 31 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
16c2zouB_



19.8 14 PDB header:cell adhesion
Chain: B: PDB Molecule:spondin-1;
PDBTitle: crystal struture of human f-spondin reeler domain (fragment 2)
17d2b5dx1



19.3 18 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Families 57/38 glycoside transferase middle domain
Family:AmyC C-terminal domain-like
18c2xzbB_



18.5 14 PDB header:hydrolase
Chain: B: PDB Molecule:potassium-transporting atpase subunit beta;
PDBTitle: pig gastric h,k-atpase with bound bef and sch28080
19d1rjja_



18.4 12 Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
20c3gycB_



18.0 29 PDB header:hydrolase
Chain: B: PDB Molecule:putative glycoside hydrolase;
PDBTitle: crystal structure of putative glycoside hydrolase (yp_001304622.1)2 from parabacteroides distasonis atcc 8503 at 1.85 a resolution
21d1ufaa1



not modelled 16.3 13 Fold:immunoglobulin/albumin-binding domain-like
Superfamily:Families 57/38 glycoside transferase middle domain
Family:AmyC C-terminal domain-like
22d1xnta_



not modelled 15.4 33 Fold:Galactose-binding domain-like
Superfamily:Galactose-binding domain-like
Family:N-terminal domain of xrcc1
23c1xnaA_



not modelled 15.0 33 PDB header:dna binding protein
Chain: A: PDB Molecule:protein (dna-repair protein xrcc1);
PDBTitle: nmr solution structure of the single-strand break repair2 protein xrcc1-n-terminal domain
24d1ha6a_



not modelled 14.6 23 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
25c2bsjB_



not modelled 13.9 31 PDB header:chaperone
Chain: B: PDB Molecule:chaperone protein syct;
PDBTitle: native crystal structure of the type iii secretion2 chaperone syct from yersinia enterocolitica
26c3cguB_



not modelled 13.9 33 PDB header:hormone/signaling protein
Chain: B: PDB Molecule:protein giant-lens;
PDBTitle: crystal structure of unliganded argos
27c1yd2A_



not modelled 13.8 27 PDB header:dna binding protein
Chain: A: PDB Molecule:uvrabc system protein c;
PDBTitle: crystal structure of the giy-yig n-terminal endonuclease domain of2 uvrc from thermotoga maritima: point mutant y19f bound to the3 catalytic divalent cation
28c4gopB_



not modelled 13.5 26 PDB header:dna binding protein/dna
Chain: B: PDB Molecule:putative uncharacterized protein;
PDBTitle: structure and conformational change of a replication protein a2 heterotrimer bound to ssdna
29d1icwa_



not modelled 12.7 17 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
30d1goia3



not modelled 10.5 18 Fold:FKBP-like
Superfamily:Chitinase insertion domain
Family:Chitinase insertion domain
31c2pi2A_



not modelled 10.4 8 PDB header:replication, dna binding protein
Chain: A: PDB Molecule:replication protein a 32 kda subunit;
PDBTitle: full-length replication protein a subunits rpa14 and rpa32
32c2wq4B_



not modelled 10.4 23 PDB header:sugar binding protein
Chain: B: PDB Molecule:lectin;
PDBTitle: n-terminal domain of bc2l-c lectin from burkholderia2 cenocepacia
33c3o1lB_



not modelled 10.3 28 PDB header:hydrolase
Chain: B: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (pspto_4314)2 from pseudomonas syringae pv. tomato str. dc3000 at 2.20 a resolution
34d1q4ra_



not modelled 10.1 15 Fold:Ferredoxin-like
Superfamily:Dimeric alpha+beta barrel
Family:Plant stress-induced protein
35c3obiC_



not modelled 10.0 17 PDB header:hydrolase
Chain: C: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (np_949368)2 from rhodopseudomonas palustris cga009 at 1.95 a resolution
36d1ft8a2



not modelled 9.7 38 Fold:Ferredoxin-like
Superfamily:RNA-binding domain, RBD
Family:Non-canonical RBD domain
37c3nrbD_



not modelled 9.7 19 PDB header:hydrolase
Chain: D: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of a formyltetrahydrofolate deformylase (puru,2 pp_1943) from pseudomonas putida kt2440 at 2.05 a resolution
38d1qe6a_



not modelled 9.7 24 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
39d1dlja3



not modelled 9.4 14 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Family:UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
40c3u6xU_



not modelled 9.2 23 PDB header:viral protein
Chain: U: PDB Molecule:orf48;
PDBTitle: phage tp901-1 baseplate tripod
41d1ytla1



not modelled 9.1 17 Fold:DHS-like NAD/FAD-binding domain
Superfamily:DHS-like NAD/FAD-binding domain
Family:ACDE2-like
42c2kpsA_



not modelled 9.0 14 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: solution structure of domain iv from the ybbr family protein of2 desulfitobacterium hafniense
43d1foba_



not modelled 8.9 29 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
44d1mgsa_



not modelled 8.8 24 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
45c3ulcA_



not modelled 8.7 60 PDB header:membrane protein
Chain: A: PDB Molecule:target of rapamycin complex 2 subunit avo1;
PDBTitle: crystal structure of the pleckstrin homology domain of saccharomyces2 cerevisiae avo1, a torc2 subunit, in the p3121 crystal form
46c3hyjD_



not modelled 8.6 20 PDB header:transcription regulator
Chain: D: PDB Molecule:protein duf199/whia;
PDBTitle: crystal structure of the n-terminal laglidadg domain of duf199/whia
47c1eysC_



not modelled 8.3 22 PDB header:electron transport
Chain: C: PDB Molecule:photosynthetic reaction center;
PDBTitle: crystal structure of photosynthetic reaction center from a2 thermophilic bacterium, thermochromatium tepidum
48d1eysc_



not modelled 8.3 22 Fold:Multiheme cytochromes
Superfamily:Multiheme cytochromes
Family:Photosynthetic reaction centre (cytochrome subunit)
49d1ur4a_



not modelled 8.2 22 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
50c3rpjA_



not modelled 8.1 36 PDB header:transcription regulator
Chain: A: PDB Molecule:curlin genes transcriptional regulator;
PDBTitle: structure of a curlin genes transcriptional regulator protein from2 proteus mirabilis hi4320.
51d2pi2a1



not modelled 8.0 9 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Single strand DNA-binding domain, SSB
52d1hjsa_



not modelled 8.0 19 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
53c3cooB_



not modelled 7.9 13 PDB header:cell adhesion
Chain: B: PDB Molecule:spondin-1;
PDBTitle: the crystal structure of reelin-n domain of f-spondin
54c1yd6A_



not modelled 7.9 29 PDB header:dna binding protein
Chain: A: PDB Molecule:uvrc;
PDBTitle: crystal structure of the giy-yig n-terminal endonuclease2 domain of uvrc from bacillus caldotenax
55d2c7fa2



not modelled 7.8 30 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
56c3isyA_



not modelled 7.5 15 PDB header:protein binding
Chain: A: PDB Molecule:intracellular proteinase inhibitor;
PDBTitle: crystal structure of an intracellular proteinase inhibitor (ipi,2 bsu11130) from bacillus subtilis at 2.61 a resolution
57d1e6vc_



not modelled 7.5 29 Fold:Ferredoxin-like
Superfamily:Methyl-coenzyme M reductase subunits
Family:Methyl-coenzyme M reductase gamma chain
58c2l4nA_



not modelled 7.5 32 PDB header:cytokine
Chain: A: PDB Molecule:c-c motif chemokine 21;
PDBTitle: solution structure of the chemokine ccl21
59c3lsoA_



not modelled 7.4 31 PDB header:membrane protein
Chain: A: PDB Molecule:putative membrane anchored protein;
PDBTitle: crystal structure of putative membrane anchored protein from2 corynebacterium diphtheriae
60c2o011_



not modelled 7.4 21 PDB header:photosynthesis
Chain: 1: PDB Molecule:at3g54890;
PDBTitle: the structure of a plant photosystem i supercomplex at 3.4 angstrom2 resolution
61c3rh0A_



not modelled 7.4 25 PDB header:oxidoreductase
Chain: A: PDB Molecule:arsenate reductase;
PDBTitle: corynebacterium glutamicum mycothiol/mycoredoxin1-dependent arsenate2 reductase cg_arsc2
62d1pvma3



not modelled 7.3 31 Fold:Rubredoxin-like
Superfamily:Hypothetical protein Ta0289 C-terminal domain
Family:Hypothetical protein Ta0289 C-terminal domain
63d1iknc_



not modelled 7.0 19 Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
64c3swhA_



not modelled 7.0 19 PDB header:exocytosis
Chain: A: PDB Molecule:protein unc-13 homolog a;
PDBTitle: munc13-1, mun domain, c-terminal module
65d1u6za2



not modelled 7.0 15 Fold:Ribonuclease H-like motif
Superfamily:Actin-like ATPase domain
Family:Ppx/GppA phosphatase
66d1rwta_



not modelled 6.9 21 Fold:Chlorophyll a-b binding protein
Superfamily:Chlorophyll a-b binding protein
Family:Chlorophyll a-b binding protein
67d1qnka_



not modelled 6.9 29 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
68c3louB_



not modelled 6.7 19 PDB header:hydrolase
Chain: B: PDB Molecule:formyltetrahydrofolate deformylase;
PDBTitle: crystal structure of formyltetrahydrofolate deformylase (yp_105254.1)2 from burkholderia mallei atcc 23344 at 1.90 a resolution
69c3bb5B_



not modelled 6.7 13 PDB header:unknown function
Chain: B: PDB Molecule:stress responsive alpha-beta protein;
PDBTitle: crystal structure of a dimeric ferredoxin-like protein of unknown2 function (jann_3925) from jannaschia sp. ccs1 at 2.30 a resolution
70d1ifva_



not modelled 6.6 26 Fold:TBP-like
Superfamily:Bet v1-like
Family:Pathogenesis-related protein 10 (PR10)-like
71d1z0jb1



not modelled 6.6 23 Fold:Long alpha-hairpin
Superfamily:Rabenosyn-5 Rab-binding domain-like
Family:Rabenosyn-5 Rab-binding domain-like
72c2o012_



not modelled 6.5 21 PDB header:photosynthesis
Chain: 2: PDB Molecule:type ii chlorophyll a/b binding protein from photosystem i;
PDBTitle: the structure of a plant photosystem i supercomplex at 3.4 angstrom2 resolution
73c2cwoD_



not modelled 6.5 44 PDB header:rna binding protein
Chain: D: PDB Molecule:rna silencing suppressor;
PDBTitle: crystal structure of rna silencing suppressor p21 from beet yellows2 virus
74d1qw9a2



not modelled 6.4 30 Fold:TIM beta/alpha-barrel
Superfamily:(Trans)glycosidases
Family:beta-glycanases
75d1j8ia_



not modelled 6.4 18 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
76d2boaa2



not modelled 6.4 27 Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Pancreatic carboxypeptidase, activation domain
77d1cdta_



not modelled 6.3 24 Fold:Snake toxin-like
Superfamily:Snake toxin-like
Family:Snake venom toxins
78d1o6xa_



not modelled 6.1 32 Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Pancreatic carboxypeptidase, activation domain
79d1ex0a1



not modelled 6.0 19 Fold:Immunoglobulin-like beta-sandwich
Superfamily:E set domains
Family:Transglutaminase N-terminal domain
80c3siqF_



not modelled 6.0 12 PDB header:ligase
Chain: F: PDB Molecule:apoptosis 1 inhibitor;
PDBTitle: crystal structure of autoinhibited diap1-bir1 domain
81d1mv8a3



not modelled 6.0 20 Fold:Adenine nucleotide alpha hydrolase-like
Superfamily:UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
Family:UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
82d1pyta_



not modelled 5.9 37 Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Pancreatic carboxypeptidase, activation domain
83d1f9ra_



not modelled 5.9 26 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
84d1mi2a_



not modelled 5.8 31 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
85c3u5gh_



not modelled 5.8 35 PDB header:ribosome
Chain: H: PDB Molecule:40s ribosomal protein s7-a;
PDBTitle: the structure of the eukaryotic ribosome at 3.0 a resolution. this2 entry contains proteins of the 40s subunit, ribosome b
86d2auwa2



not modelled 5.7 22 Fold:NE0471 N-terminal domain-like
Superfamily:NE0471 N-terminal domain-like
Family:NE0471 N-terminal domain-like
87c1svcP_



not modelled 5.7 19 PDB header:transcription/dna
Chain: P: PDB Molecule:protein (nuclear factor kappa-b (nf-kb));
PDBTitle: nfkb p50 homodimer bound to dna
88d1m8aa_



not modelled 5.7 29 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
89d1bo0a_



not modelled 5.6 26 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
90d2ptaa_



not modelled 5.6 38 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Short-chain scorpion toxins
91d1pcaa1



not modelled 5.6 32 Fold:Ferredoxin-like
Superfamily:Protease propeptides/inhibitors
Family:Pancreatic carboxypeptidase, activation domain
92d1b0na1



not modelled 5.6 71 Fold:Dimerisation interlock
Superfamily:SinR repressor dimerisation domain-like
Family:SinR repressor dimerisation domain-like
93c2yy3B_



not modelled 5.6 30 PDB header:translation
Chain: B: PDB Molecule:elongation factor 1-beta;
PDBTitle: crystal structure of translation elongation factor ef-1 beta from2 pyrococcus horikoshii
94d1kpta_



not modelled 5.5 27 Fold:Yeast killer toxins
Superfamily:Yeast killer toxins
Family:Virally encoded KP4 toxin
95d1g2ta_



not modelled 5.5 31 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
96c1y6zA_



not modelled 5.5 28 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:heat shock protein, putative;
PDBTitle: middle domain of plasmodium falciparum putative heat shock protein2 pf14_0417
97d1b2ta_



not modelled 5.5 19 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
98d1f9qa_



not modelled 5.5 29 Fold:IL8-like
Superfamily:Interleukin 8-like chemokines
Family:Interleukin 8-like chemokines
99c3ve5D_



not modelled 5.5 36 PDB header:recombination
Chain: D: PDB Molecule:recombination protein recr;
PDBTitle: structure of recombination mediator protein recr16-196 deletion mutant

Binding site prediction 

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