Secondary structure and disorder prediction |   |
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Sequence |   |
M | K | I | A | D | Q | F | H | D | E | L | C | R | L | A | A | I | N | F | E | A | H | V | L | H | G |
Secondary structure |   |
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SS confidence |   |
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Disorder |   |
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Disorder confidence |   |
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Confidence Key |
High(9) |   |
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Low (0) |
? | Disordered |
| Alpha helix |
| Beta strand |
Hover over an aligned region to see model and summary info
Please note, only up to the top 20 hits are modelled to reduce computer load
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1 |
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PDB 2vog chain B
Region: 3 - 8 Aligned: 6 Modelled: 6 Confidence: 40.5% Identity: 100% PDB header:apoptosis Chain: B: PDB Molecule:bcl-2-modifying factor;
PDBTitle: structure of mouse a1 bound to the bmf bh3-domain
Phyre2
2 |
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PDB 2fz0 chain A
Region: 3 - 11 Aligned: 9 Modelled: 9 Confidence: 22.3% Identity: 67% PDB header:membrane protein Chain: A: PDB Molecule:v-snare component of the vacuolar snare complex
PDBTitle: identification of yeast r-snare nyv1p as a novel longin2 domain protein
Phyre2
3 |
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PDB 1xeq chain A domain 1
Region: 15 - 24 Aligned: 10 Modelled: 10 Confidence: 7.7% Identity: 70% Fold: S15/NS1 RNA-binding domain Superfamily: S15/NS1 RNA-binding domain Family: N-terminal, RNA-binding domain of nonstructural protein NS1
Phyre2
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Detailed template information |   |
Binding site prediction |   |
Due to computational demand, binding site predictions are not run for batch jobs
If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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If you use the binding site
predictions from 3DLigandSite, please also cite: |
3DLigandSite: predicting ligand-binding sites using similar structures. |
Wass MN, Kelley LA and Sternberg
MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed] |
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