Return to main results Retrieve Phyre Job Id

Job DescriptionQ95PW9
Confidence29.01%DateFri May 3 21:14:46 BST 2013
Rank385Aligned Residues123
% Identity12%Templatec1m9sA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains.
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30... ......40....... ..50.........60.........70.........80.........
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Query Sequence  AQEEQELTIKKNERLKLLDD. . . SKNWWKVMNDSNSV. GFVPSNYVRKESIVDKAKGTIKGLARGRNRSSDPEPEERLNG
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Template Sequence  AKHVNKLSVYQGKNMRILREAKTPITTWYQFSIGGKVIGWVDTRALNTF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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GGGG
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SS
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   500.........510.........520.........530.........540........
 
   90.........100.........110.........120.........130.........140...... ...150.........160......
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Query Sequence  IARLAFSLNNNCAVTPSSNKIPMMSSKTKAVVKFTYEPRLEDELGLTKGDFVYVVEK. . . STDGWWKGEAPNGGVGWFPS
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Template Sequence  . . . . . YKQSMEKPTRLTRYVSANKAGESYYKVPVADNPVKRGTLAKYKNQKLIVDCQATIEGQLWYRIRTSSTFIGWTKA
Template Known Secondary structure  .....GGG

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   549550.........560.........570.........580.........590.........600.........610.........620...
 
   167..170..
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Query Sequence  NYVEEV
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Template Sequence  ANLRAQ
Template Known Secondary structure  GG

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   624.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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