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Job DescriptionQ95PW9
Confidence96.77%DateFri May 3 21:14:46 BST 2013
Rank328Aligned Residues181
% Identity22%Templatec3h41A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150........ .160.........170.........180.........190.........200.........
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Query Sequence  GDFVYVVEKSTDGWWKGEAPN. . . . . . . . GGVGWFPSNYVEEVEASTNGNQGSIENRNPAAAAVPAPIMMQAPPPKLQAS
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Template Sequence  GQEVTVVDKK. GDWVKVLVHGQPTPRNEEGYPGWXPEKQLTYNQEFADKTNEPFVLVTK. . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
.TTTT

BTTBSS
GGG

TTTS

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   8990........ .100.........110.........120.........130.........140......
 
   210.........220.........230.........240.........250.........260.........270.........280.........
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Query Sequence  RSSFEVVVALYSFDASSSEELSFKKGERLEIVDHPEHDPDWWMARNASGTTGLVPRNYIEVVNDSSSSKASHQDFAPQYS
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Template Sequence  . . . . . PTAILYINPSEKHKSLEVSYNTRLPLLS. . . EDTISYRVLLPNGQKAWLRKNDGTFYRSQNDIPTP. . . . AADDL
Template Known Secondary structure  .....SSS
TT

TT
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   147..150.........160.........170.... .....180.........190.........200......... 210....
 
   290.........300.... .....310.........320.........330.........340 ......
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Query Sequence  GNGEIPMEQQPWYFG. . . . . . . . . . . . . . . . . . . . . RISRERAEDLLLHGREGEFLVRDSESNPGDLSISMR. . GIERNK
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Template Sequence  INTGKXFLGLPYIWAGTSGFGFDSGFTHTIYKSHGITIPRDSGPQ. . . . . SRNGVAVDKEHLQKGDLIFFAHDQGKGSVH
Template Known Secondary structure  TTTT
B

TT
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TTT



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   215....220.........230.........240.........250......... 260.........270.........280.........
 
   347..350.......
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Query Sequence  HFKVQNVDGLL
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Template Sequence  HVAXYIGDGNX
Template Known Secondary structure  TT
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   291........300.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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