Return to main results Retrieve Phyre Job Id

Job DescriptionQ95PW9
Confidence99.96%DateFri May 3 21:14:46 BST 2013
Rank17Aligned Residues146
% Identity21%Templatec1ng2A_
PDB info PDB header:oxidoreductase activatorChain: A: PDB Molecule:neutrophil cytosolic factor 1; PDBTitle: structure of autoinhibited p47phox
Resolution1.70 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  DYVVVKYDYLAQEEQELTIKKNERLKLLDDSKNWWKVMNDSNSVGFVPSNYVRKESIVDKAKGTIKGLARGRNRSSDPEP
Query Conservation    






 
    



  

 
 
    
 

      
  
 

 



                           
Alig confidence 























































........................
Template Conservation      




      


   

 
 

     


 
   
  
  
  

    ........................
Template Sequence  QTYRAIADYEKTSGSEMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLD. . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
SS
B

SSTT


B
TT


TTS









GGG


SS........................
Template Predicted Secondary structure 


























........................
Template SS confidence 















































































   159160.........170.........180.........190.........200.........210....
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
Predicted Secondary structure 
































































Query SS confidence 















































































Query Sequence  EERLNGIARLAFSLNNNCAVTPSSNKIPMMSSKTKAVVKFTYEPRLEDELGLTKGDFVYVVEKSTDGWWKGEAPNGGVGW
Query Conservation                                                  


   
    
               
  
 
Template Conservation  ................................................................................
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  ................................................................................
Template Predicted Secondary structure  ................................................................................
Template SS confidence 















































































  
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
Predicted Secondary structure 

































































Query SS confidence 















































































Query Sequence  FPSNYVEEVEASTNGNQGSIENRNPAAAAVPAPIMMQAPPPKLQASRSSFEVVVALYSFDASSSEELSFKKGERLEIVDH
Query Conservation       
                                                


        


   

 
 

  
Alig confidence  ....................................











































Template Conservation  ....................................                        
    


   
  
 
   
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SPDETEDPEPNYAGEPYVAIKAYTAVEGDEVSLLEGEAVEVIHK
Template Known Secondary structure  ....................................
SS
S





TT
SS
B


STTB

B
TT

Template Predicted Secondary structure  ....................................


































Template SS confidence 















































































   215....220.........230.........240.........250........
 
   244.....250.........260.........270.........280.........290..
Predicted Secondary structure 



































Query SS confidence 
















































Query Sequence  PEHDPDWWMARNASGTTGLVPRNYIEVVNDSSSSKASHQDFAPQYSGNG
Query Conservation                
  
  
  

                 
      
Alig confidence 


..






.



































Template Conservation     .. 
     . 
  
 

  

                   
   
Template Sequence  LLD. . GWWVIRK. DDVTGYFPSMYLQKSGQDVSQAQRQIKRGAPPRRSS
Template Known Secondary structure 
TT..S.TTGGGTTS
T

S




GGG
Template Predicted Secondary structure 


..
.























Template SS confidence 
















































   259260. ....... .270.........280.........290.........300....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D