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Job DescriptionQ95PW9
Confidence99.80%DateFri May 3 21:14:46 BST 2013
Rank104Aligned Residues201
% Identity13%Templatec1mv3A_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.........120.........130.........140.........150.
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Query Sequence  ARGRNRSSDPEPEERLNGIARLAFSLNNNCAVTPSSNKIPMMSSKTKAVVKFTYEPRLEDELGLTKGDFVYVVEKSTDGW
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Template Sequence  DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAE
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   270.........280.........290.........300.........310.........320.........330.........340.........
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  WKGEAPNGGVGWFPSNYVEEVEASTNGNQGSIENRNPAAAAVPAPIMMQAPPPKLQASRSSFEVVVALYSFDASSSEELS
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Template Sequence  ASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFMFKVQAQHDYTATDTDELQ
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   350.........360.........370.........380.........390.........400.........410.........420.........
 
   232.......240.... .....250.... .....260.........270..
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Query Sequence  FKKGERLEIVDHP. . . EHDPDWWMAR. . . . . . . . . NASGTTGLVPRNYIEVVN
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Template Sequence  LKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERVP
Template Known Secondary structure  B
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   430.........440.........450.........460.........470.........480..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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