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Job DescriptionQ95PW9
Confidence99.72%DateFri May 3 21:14:46 BST 2013
Rank132Aligned Residues145
% Identity21%Templatec2dybA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: the crystal structure of human p40(phox)
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  VVVKYDYLAQEEQELTIKKNERLKLLDDSKNWWKVMNDSNSVGFVPSNYVRKESIVDKAKGTIKGLARGRNRSSDPEPEE
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Template Sequence  AEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVK. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SS
B

SSSSB

B
TT

SSSTTGGG.............................
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   175....180.........190.........200.........210.........220.....
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  RLNGIARLAFSLNNNCAVTPSSNKIPMMSSKTKAVVKFTYEPRLEDELGLTKGDFVYVVEKSTDGWWKGEAPNGGVGWFP
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   166...170.........180.........190.........200.........210.........220.........230... ......240...
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Query Sequence  SNYVEEVEASTNGNQGSIENRNPAAAAVPAPIMMQAPPPKLQASRSSFEVVVALYSFDASSSEELSFK. . KGERLEIVDH
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Template Sequence  . . . . . ILKDFPEEDDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSD
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TT



SS

S
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S
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   226...230.........240.........250.........260.........270.........280.........290.........300
 
   244.....250.........260....
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Query Sequence  PEHDPDWWMARNASGTTGLVP
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Template Sequence  EDVALMVRQARGLPSQKRLFP
Template Known Secondary structure  TTS

BTTB
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   301........310.........320.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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