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Job DescriptionQ95PW9
Confidence99.77%DateFri May 3 21:14:46 BST 2013
Rank110Aligned Residues78
% Identity24%Templatec3or8A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   298.300.........310.........320.........330.........340 .........350... ......360........
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Query Sequence  QQPWYFGRISRERAEDLLLHGREGEFLVRDSESNPGDLSISMR. GIERNKHFKVQNV. . . . . . . . DGLLKIGNRTFVDMN
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Template Sequence  NHPYYF. PFNGKQAEDYLRSKERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQELEKENPLALGKVLVVEGQRYHDLD
Template Known Secondary structure 

TT.


TTS
TT

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   5....10 .........20.........30.........40.........50.........60.........70.........80...
 
   369370......
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Query Sequence  ALINHYTT
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Template Sequence  QIIVEYLQ
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   84.....90.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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