 |
Job Description | Q95XA9 | Confidence | 97.27% | Date | Sun Jun 30 11:04:27 BST 2013 |
Rank | 402 | Aligned Residues | 63 |
% Identity | 16% | Template | c2ke9A_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:caskin-2; |
PDBTitle: nmr solution structure of the caskin sh3 domain
|
Resolution | UNK |
|
 |
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | |
|
|
|
. | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . |  |  |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | I | Q | E | T | K | Y | L | C | V | R | R | F | E | Q | R | E | I | D | E | M | N | S | E | I | G | D | I | L | S | V | C | E | T | D | E | T | G | W | M | L | G | . |
. |
. |
. |
R | N | E | T | S | G | S | V | G | I | I | L | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |
|
|
|
|   | . | . | . | . |   |   |   |   |   |
|   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |   | . | . |   |   |   |
|
|
|
|   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
Template Sequence |   |
G | S | L | K | V | R | A | L | K | D | F | W | N | L | H | . |
. |
D | P | T | A | L | N | V | R | A | G | D | V | I | T | V | L | E | Q | H | P | D | G | R | W | K | G | H | I | H | E | S | Q | R | G | T | D | R | I | G | Y | F | P | P |
Template Known Secondary structure |   |
|
|  |  |  |  |  | S | S |
| B |
|
|
| S | . | . |
| T | T | B |
|
| B |
| T | T |
|  |  |  |  | S |
| S | S |
| S | S |
|  |  |  |  |  |
|
| S | S | T | T | S |
|
|
|  |  |  |
| G |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
282 | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | |
|
. | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . |
  |
  |   |
182 | . | . | . | . | . | . | . | 190 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | H | L | E | P | L | I | T | E |
Query Conservation |   |
  |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |
|
|
Template Sequence |   |
G | I | V | E | V | V | S | K | R |
Template Known Secondary structure |   |
G | G |  |  | S | S |
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
340 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|