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Job DescriptionQ95XA9
Confidence97.47%DateSun Jun 30 11:04:27 BST 2013
Rank370Aligned Residues57
% Identity23%Templatec2vknA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:protein ssu81; PDBTitle: yeast sho1 sh3 domain complexed with a peptide from pbs2
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   131........140. ........150.........160.........170.........180........
Predicted Secondary structure 





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Query Sequence  TKYLCVRRFEQ. . REIDEMNSEIGDILSVCETDETGWMLGRNETSGSVGIILRSHLEPLI
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Template Sequence  YKAKALYPYDADDDDAYEISFEQNEILQVS. DIEGRWWKARRA. NGETGIIPSNYVQLID
Template Known Secondary structure  SS
B


SSSTTB

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TT
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GGG
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   5....10.........20.........30.... .....40...... ...50.........60..
 
   189
Predicted Secondary structure 
Query SS confidence 
Query Sequence  T
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  G
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   63
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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