 |
Job Description | Q95XA9 | Confidence | 98.74% | Date | Sun Jun 30 11:04:27 BST 2013 |
Rank | 185 | Aligned Residues | 98 |
% Identity | 17% | Template | c3hk0B_ |
PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:growth factor receptor-bound protein 10; |
PDBTitle: crystal structure of the ra and ph domains of grb10
|
Resolution | 2.60 Å |
|
 |
  |   |
386 | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | |
. | . | . | . | . | . | . | . | 440 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | S | S | T | T | T | V | A | A | T | V | A | L | R | K | S | R | E | E | K | Q | W | K | E | C | W | L | T | L | S | D | I | P | G | G | S | S | Q | L | S | V | F | D | S | M | G | . |
S | K | L | R | Q | Q | V | D | L | S | T | C | T |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |
|   |   |
|   |
|   |   |   |   |
|   |
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   | . |
|
|
|
|   |
|
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   | . | . | . | . | . |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
N | S | S | S | S | P | E | I | Q | G | F | L | H | V | K | E | L | G | K | K | S | W | K | K | L | Y | V | C | L | R | R | S | . |
. |
. |
. |
. |
G | L | Y | C | S | L | Q | L | L | A | D | L | E | D | S | N | I | F | S | L | I | A | G |
Template Known Secondary structure |   |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |
| S | S | S | S |
|  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . |  |  |  |  |
|
|  |  |  |  |
|
| T | T |  |  |  |  |  |  | S | S | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
  |
  |   |
445 | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | |
. | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . |
Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
| . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | W | L | D | E | S | V | F | C | A | D | G | C | L | F | L | S | P | S | F | P | Q | Q | Q | P | P | . |
T | L | Y | L | C | F | R | P | Y | T | A | F | L | K | W | I | R | I | L | R |
Query Conservation |   |
|
|   |   |   |
|
|   |
|   |
|   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   | . |   |   |
|
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   | . | . | . |
|   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |
|
|   |
|
|
|
Template Sequence |   |
R | K | Q | Y | N | A | . |
. |
. |
P | T | D | H | G | L | C | I | K | P | N | K | V | R | N | E | T | K | E | L | R | L | L | C | A | E | D | E | Q | T | R | T | S | W | M | T | A | F | R |
Template Known Secondary structure |   |
T | T | T | T |
|
| . | . | . | S | S | S |
|  |  |  |  |  |  | T | T |
| S | S |
|
| T | T |
|
|  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
293 | . | . | . | . | . | |
|
|
. | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|