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Job Description | Q95XA9 | Confidence | 98.00% | Date | Sun Jun 30 11:04:27 BST 2013 |
Rank | 243 | Aligned Residues | 60 |
% Identity | 15% | Template | c3rebD_ |
PDB info |
PDB header:protein binding | Chain: D: PDB Molecule:tyrosine-protein kinase hck; |
PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain
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Resolution | 3.45 Å |
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129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | E | T | K | Y | L | C | V | R | R | F | E | Q | R | E | I | D | E | M | N | S | E | I | G | D | I | L | S | V | C | E | T | D | E | T | G | W | M | L | G | R | N | E | T | S | G | S | V | G | I | I | L | R | S | H | L | E | P | L | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | D | I | I | V | V | A | L | Y | D | Y | V | S | W | S | P | D | D | L | S | F | Q | K | G | D | Q | M | V | V | L | E | E | S | G | E | W | W | . |
K | A | R | S | L | A | T | R | K | E | G | Y | I | P | S | N | Y | V | A | R | V | D |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
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189 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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138 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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