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Job DescriptionQ95XA9
Confidence98.37%DateSun Jun 30 11:04:27 BST 2013
Rank201Aligned Residues108
% Identity10%Templatec3l9bA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:otoferlin; PDBTitle: crystal structure of rat otoferlin c2a
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   518.520.........530.........540.........550.........560.........570.......
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Query Sequence  SILSIEIDKFRSELLKSDMFYSAQVSLNGVKIGVSNAFAPAGNKGPNEMPVVVIDSKFVI
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Template Sequence  MALIVHLKTVSELRGRA. . DRIAKVTFRGQSFYSRVLE. . . . . . . . NCEDVADFDETFRW
Template Known Secondary structure  S

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   1........10....... ..20.........30...... ...40.........50
 
   578.580..... ....590.........600.........610.........620 .......
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Query Sequence  PCIPTCST. . NIQLSMNSHSSIGKRGRPCGVTVTICLNENNESIC. . . . . . . . QSQADST
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Template Sequence  PVASSIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKT
Template Known Secondary structure  SS


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   51........60.........70.........80.........90.........100.........110
 
   628.630.....
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Query Sequence  GFVFRAQR
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Template Sequence  SLSMEVRY
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   111.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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