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Job DescriptionQ95XA9
Confidence99.42%DateSun Jun 30 11:04:27 BST 2013
Rank63Aligned Residues94
% Identity17%Templatec1ka6A_
PDB info PDB header:immune systemChain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   194.....200....... ..210.........220.........230.........240........
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Query Sequence  LSDLPYFYDTVSTD. . . . . MVQYSPIGTFLLRRSSKGTDTYALLVKTQFDLVEKFLIVGC
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Template Sequence  MDAVAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYH. GYIYTYRVSQT
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   1........10.........20.........30.........40........ .50.........
 
   249250..... ....260.........270.........280........
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Query Sequence  PSRGFSL. . . . . . AGRPFPTIGHVLTRYCDRAISGGVRLTHAVCVK
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Template Sequence  ETGSWSAETAPGVHKRYFRKIKNLISAFQKPDQGIVIPLQYPVEKK
Template Known Secondary structure  TTS

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   60.........70.........80.........90.........100.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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