 |
Job Description | Q95XA9 | Confidence | 82.55% | Date | Sun Jun 30 11:04:27 BST 2013 |
Rank | 486 | Aligned Residues | 85 |
% Identity | 22% | Template | c1bf5A_ |
PDB info |
PDB header:gene regulation/dna | Chain: A: PDB Molecule:signal transducer and activator of transcription |
PDBTitle: tyrosine phosphorylated stat-1/dna complex
|
Resolution | 2.90 Å |
|
 |
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | D | V | W | Y | H | G | E | L | N | E | H | D | A | N | H | L | L | Q | G | T | S | P | G | A | F | L | V | R | Q | T | G | . |
. |
. |
Q | T | R | F | Y | L | S | I | L | D | Q | D | G | Y | P | K | H | L | P | I | R | Q | L | T | P |
Query Conservation |   |
  |   |   |
|
|
|
|   |
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|   | . | . | . |
|
|   |   |
|
|
|   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
N | D | G | C | I | M | G | F | I | S | K | E | R | E | R | A | L | L | K | D | Q | Q | P | G | T | F | L | L | R | F | S | E | S | S | R | E | G | A | I | T | F | T | W | V | E | R | S | Q | N | G | G | E | P | D | F | H | A | V | E | P |
Template Known Secondary structure |   |
 | T | T |
|
|
|
|
|
|
|  |  |  |  |  |  |  | T | T | T |
|
| S |
|
|
|
|  |  |  |
| S | S |
| S | S |
|
|  |  |  |  |  |
|
|
|
| S | S | S | S |
|
|
|
|  |  |
|
|
|
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
574 | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . |
  |
  |   |
90 | . | . | . | . | . | . | . | . | . | |
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |
|
|
|
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | H | Y | F | F | E | G | K | R | F | . |
. |
E | T | L | R | D | I | V | D | A | Y | Q | L | A | V | I | P | V | R | K | G | G | I | M | P | I | N | G |
Query Conservation |   |
  |
|
|
|   |   |
|
|   |
| . | . |   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
. |
Y | T | K | K | E | L | S | A | V | T | F | P | D | I | I | . |
. |
. |
. |
. |
R | N | Y | K | V | M | A | A | E | N | I | P | E | N | P |
Template Known Secondary structure |   |
. | . | . | . | B |
|  |  |  |  |  | S | S |
|  |  |  |  |  | . | . | . | . | . |  | T |
|
|
| S |
|
| S | S | S |
|
|
| S |
Template Predicted Secondary structure |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
634 | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|