 |
Job Description | Q95XA9 | Confidence | 96.71% | Date | Sun Jun 30 11:04:27 BST 2013 |
Rank | 436 | Aligned Residues | 99 |
% Identity | 12% | Template | d1ugka_ |
SCOP info | C2 domain-like
| C2 domain (Calcium/lipid-binding domain, CaLB)
| Synaptotagmin-like (S variant)
|
Resolution | UNK |
|
 |
  |   |
514 | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | |
|
|
|
. | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | S | Q | V | S | I | L | S | I | E | I | D | K | F | R | S | E | L | L | K | . |
. |
. |
. |
S | D | M | F | Y | S | A | Q | V | S | L | N | G | V | K | I | G | V | S | N | A | F | A | P | A | G | N | K | G | P | N | E | M | P | V | V |
Query Conservation |   |
|   |
|
|   |   |
|   |
|   |
|   |
|
|
|
|
|   |   |
| . | . | . | . |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
| . | . | . | . | . | . |   |   |
|
Template Sequence |   |
N | F | E | R | K | A | F | V | V | N | I | K | E | A | R | G | L | P | A | M | D | E | Q | S | M | T | S | D | P | Y | I | K | M | T | I | L | P | E | K | K | H | K | V | K | T | R | V | L | R | K | T | . |
. |
. |
. |
. |
. |
L | D | P |
Template Known Secondary structure |   |
 | G | G | G | T |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
| B | T | T | T | T | B |
|  |  |  |  |  |  |  |  |  | T | T | T |
| S |  |  |  |
|
|
|
| S | S |
| . | . | . | . | . | . | S | S |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. | 70 | . |
  |
  |   |
570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | |
|
|
. | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | D | S | K | F | V | I | P | C | I | P | T | C | S | T | . |
. |
. |
N | I | Q | L | S | M | N | S | H | S | S | I | G | K | R | G | R | P | C | G | V | T | V | T | I | C | L | N | E | N | N | E | S |
Query Conservation |   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|
| . | . | . |
|
|   |
|
|
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |
|   |
|   |
|   |   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
A | F | D | E | T | F | T | F | Y | G | I | P | Y | T | Q | I | Q | E | L | A | L | H | F | T | I | L | S | F | D | R | F | S | R | D | D | I | I | G | E | V | L | I | P | L | S | G | I | E | L | S | E | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
| S | T | T | G | G | G |
|  |  |  |  |  |  |  |  |  |
| S | S |
|
|
|
|
|
|  |  |  |  |  |  |
| T | T |
|
|
| T | T |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|