Return to main results Retrieve Phyre Job Id

Job DescriptionQ95XA9
Confidence100.00%DateSun Jun 30 11:04:27 BST 2013
Rank3Aligned Residues213
% Identity18%Templated1nf1a_
SCOP infoGTPase activation domain, GAP GTPase activation domain, GAP p120GAP domain-like
Resolution2.50
Model Dimensions (Å)X:61.893 Y:43.150 Z:46.429

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   644.....650....... ..660.........670.........680.........690.........700..
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Query Sequence  DRYKPLLDMIRECP. SSILSWPSQVLPSHLKQFMYTCISHLYALNPQFMSQVIRRIINDI
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Template Sequence  ERLVELVTMMGDQGELPIAMALANVVPCSQWDELARVLVTLFDSRHLLYQLLWNMFSKEV
Template Known Secondary structure 
TT
TTSTTTTS
GGGTTT
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   1206...1210.........1220.........1230.........1240.........1250.........1260.....
 
   703......710.........720.........730.........740.........750........ .
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Query Sequence  LVTSTAEDVFRKDSLATGIITQCLRHLFKTPFDEFLLENAQFSQSLKQQNLDSGGG. . . A
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Template Sequence  ELADSMQTLFRGNSLASKIMTFCFKVYGATYLQKLL. . . . . . . . . . . . DPLSLEENQRNL
Template Known Secondary structure  SSSSSTTSTT
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TTTTSS............S


TTTTTTST
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   1266...1270.........1280.........1290.........1300. ........1310...
 
   760.........770.........780.........790.........800.........810.........
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Query Sequence  VELLVNFVDQRLLTIPLATRLLTIAAECAGCRFGDEQHEQHLIKRTLSALLILRVLNPII
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Template Sequence  LQMTEKFFHAIISSSSEFPPQLRSVCHCLYQVVSQRFPQ. . NSIGAVGSAMFLRFINPAI
Template Known Secondary structure  TTTTTTT

TTTTT

S..S
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   1340.........1350.........1360.........1370........ .1380.........1390.......
 
   820.........830 .........840.........850.........860.........870.
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Query Sequence  FSTLNTGIGSQ. . . . IAKLVQISANSAASQTPTDSLTPAASTIRRMFDRIIFLVNQ
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Template Sequence  VSPYEAPIIERGLKLMSKILQSIANHVLFT. KEEHMRPFNDFVKSNFDAARRFFLD
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.SSTTSGGGT
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   1398.1400.........1410.........1420....... ..1430.........1440.........1450..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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