Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence99.89%DateSat Apr 13 13:04:39 BST 2013
Rank170Aligned Residues138
% Identity25%Templatec4g3dE_
PDB info PDB header:transferaseChain: E: PDB Molecule:nf-kappa-beta-inducing kinase; PDBTitle: crystal structure of human nf-kappab inducing kinase (nik)
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   110.........120.........130.........140.........150.........160.........170.........180.........
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Query Sequence  ERQKWELYHEDVELTKKLGEGAFGEVWKGKLLKILDANHQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLDHINVVKF
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Template Sequence  KLKPVDYEYREEVHWATHGRGSFGEVHRMEDKQ. . . . . . TGFQCAVKKVRLEVFRA. . . . . . . EELMACAGLTSPRIVPL
Template Known Secondary structure  TS

BTTB

BTTT


SSSS
TT......T

TTT

T.......TTTT


TTB

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   385....390.........400.........410....... ..420.........430.... .....440.........450.
 
   190.........200.........210...... ...220.........230.........240.........250.........260
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Query Sequence  FGVAAGTEPLYVIMELADGGALDSALG. KLHFPMIKKYELIYQAANGLAYIHEKNLMHRDVAARNCLYGGGQ
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Template Sequence  YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDG
Template Known Secondary structure  TT


TT
BSSS

TT




GGG
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   456...460.........470.........480.........490.........500.........510.........520.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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