 |
Job Description | O61768 | Confidence | 99.79% | Date | Sat Apr 13 13:04:39 BST 2013 |
Rank | 269 | Aligned Residues | 136 |
% Identity | 19% | Template | c3begA_ |
PDB info |
PDB header:transferase/splicing | Chain: A: PDB Molecule:serine/threonine-protein kinase srpk1; |
PDBTitle: crystal structure of sr protein kinase 1 complexed to its substrate2 asf/sf2
|
Resolution | 2.90 Å |
|
 |
  |   |
115 | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
|
|
|
|
|
|
. | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
E | L | Y | H | E | D | V | E | L | T | K | K | L | G | E | G | A | F | G | E | V | W | K | G | K | L | L | K | I | L | D | A | N | H | Q | P | V | L | V | A | V | K | T | A | K | L | E | S | M | T | K | E | Q | I | K | E | I | M | R | E | A | R | L | M | R | N | L | D | H | . |
. |
. |
. |
. |
. |
. |
. |
I | N | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |   |
|
|   |
|   |
|
|   |
|   |   |
|   |   |   |   | . | . | . | . | . | . |   |   |   |   |
|
|
|
|   |
|   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
D | L | F | N | G | R | Y | H | V | I | R | K | L | G | W | G | H | F | S | T | V | W | L | S | W | D | I | Q | . |
. |
. |
. |
. |
. |
G | K | K | F | V | A | M | K | V | V | K | . |
. |
. |
S | A | E | H | Y | T | E | T | A | L | D | E | I | R | L | L | K | S | V | R | N | S | D | P | N | D | P | N | R | E | M | V |
Template Known Secondary structure |   |
|  |  | T | T | T |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  | S | S | . | . | . | . | . | . | S | S | S |  |  |  |  |  |  |  |
| . | . | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
| T | T |
| T | T | S | T | T | B |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | |
|
|
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
  |
  |   |
187 | . | . | 190 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | K | F | F | G | V | A | . |
. |
. |
. |
. |
. |
A | G | T | E | P | L | Y | V | I | M | E | L | A | D | G | G | A | L | D | S | A | L | G | K | L | H | F | P | M | I | K | K | Y | E | L | I | Y | Q | A | A | N | G | L | . |
A | Y | I | H | E | K | N | L | M | H | R | D | V | A | A | R | N | C | L | Y | G | G | G |
Query Conservation |   |
  |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
| . |   |
|
|
|   |   |   |
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|
|   |   |   |   |
Template Sequence |   |
V | Q | L | L | D | D | F | K | I | S | G | V | N | G | T | H | I | C | M | V | F | E | V | L | G | H | H | L | L | K | W | I | I | K | S | N | Y | Q | G | L | P | L | P | C | V | K | K | I | I | Q | Q | V | L | Q | G | L | D | Y | L | H | T | K | C | R | I | I | H | T | D | I | K | P | E | N | I | L | L | S | V | N |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
|
| B |
| S | S |
| B |
|
|  |  |  |  |
|
|
|
|
| B |  |  |  |  |  |  |  | T | T | T | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |
|
|
|
| S | G | G | G |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
145 | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|