Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence99.80%DateSat Apr 13 13:04:39 BST 2013
Rank263Aligned Residues131
% Identity29%Templatec2jc6C_
PDB info PDB header:transferaseChain: C: PDB Molecule:calcium/calmodulin-dependent protein kinase type 1d; PDBTitle: crystal structure of human calmodulin-dependent protein2 kinase 1d
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170.........180.........190........
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  EDVELTKKLGEGAFGEVWKGKLLKILDANHQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLDHINVVKFFGVAAGTEP
Query Conservation          

 
 

 
                 



                 
        
               
Alig confidence 























......














.......



























Template Conservation    
     

 
 

 
  
    ......
   



 
     .......   

 

  
 




           
Template Sequence  KIFEFKETLGTGAFSEVVLAEEKA. . . . . . TGKLFAVKCIPKKAS. . . . . . . IENEIAVLRKIKHENIVALEDIYESPNH
Template Known Secondary structure 
SS
TT......T

TT

.......


TTB


SS
Template Predicted Secondary structure 






......



.......

















Template SS confidence 















































































   21........30.........40.... .....50......... 60.........70.........80.......
 
   199200.........210....... ..220.........230.........240.........250.........260..
Predicted Secondary structure 



.















Query SS confidence 


















.












































Query Sequence  LYVIMELADGGALDSALGK. LHFPMIKKYELIYQAANGLAYIHEKNLMHRDVAARNCLYGGGQVL
Query Conservation       
      
   
  .             

   
 


   






  


     
 
Alig confidence 


















.












































Template Conservation     
                                                             
Template Sequence  LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEE
Template Known Secondary structure 


S
B
S


TT






GGGSSSSTT
Template Predicted Secondary structure 













































Template SS confidence 
































































   94.....100.........110.........120.........130.........140.........150........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D