Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence99.92%DateSat Apr 13 13:04:39 BST 2013
Rank114Aligned Residues139
% Identity27%Templatec2r7bA_
PDB info PDB header:signaling protein, transferaseChain: A: PDB Molecule:phosphoinositide-dependent protein kinase 1; PDBTitle: crystal structure of the phosphoinositide-dependent kinase-2 1 (pdk-1)catalytic domain bound to a dibenzonaphthyridine3 inhibitor
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.. .......170.........180.........190......
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Query Sequence  HEDVELTKKLGEGAFGEVWKGKLLKILDANHQPVLVAVKTAKLES. MTKEQIKEIMREARLMRNLDHINVVKFFGVAAGT
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Template Sequence  PEDFKFGKILGEGSFSTVVLARELA. . . . . . TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD
Template Known Secondary structure  GGG
SS
TT......T

TT
T


TTB


S
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   7980.........90.........100... ......110.........120.........130.........140.........150..
 
   197..200.........210....... ..220.........230.........240.........250.........260..
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Query Sequence  EPLYVIMELADGGALDSALGK. LHFPMIKKYELIYQAANGLAYIHEKNLMHRDVAARNCLYGGGQVL
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Template Sequence  EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHI
Template Known Secondary structure  S

TT
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TTT
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   153......160.........170.........180.........190.........200.........210.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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