Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence99.49%DateSat Apr 13 13:04:39 BST 2013
Rank375Aligned Residues98
% Identity21%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20...... ...30.........40.........50.........60.........70...... ...80
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Query Sequence  KDLLHQKYYHGLLPREDIQEMLN. . KPGQFLLRTSEPVKGEKRQFVLSVVGEKKTSANHFVVRESDHKVYVDKIG. FPTI
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Template Sequence  QDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAE. . . FAISIKYNVE. . VKHIKIMTAEGLYRITEKKAFRGL
Template Known Secondary structure  S
STTSSSS

S
TTB

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   664.....670.........680.........690.........700.... .....710.... .....720.........730........
 
   81........90.........100......
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Query Sequence  IELVNHYVSTKESFSTKDGTVKAVLK
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Template Sequence  TELVEFYQQNSLKDCFKSLDTTLQFP
Template Known Secondary structure  TTS
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B
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   739740.........750.........760....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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