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Job DescriptionO61768
Confidence100.00%DateSat Apr 13 13:04:39 BST 2013
Rank3Aligned Residues243
% Identity28%Templatec1k9aB_
PDB info PDB header:transferaseChain: B: PDB Molecule:carboxyl-terminal src kinase; PDBTitle: crystal structure analysis of full-length carboxyl-terminal2 src kinase at 2.5 a resolution
Resolution2.50 Å
Model Dimensions (Å)X:84.126 Y:48.629 Z:45.744

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20...... ...30.........40.........50.........60.........70.. .......
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Query Sequence  DKDLLHQKYYHGLLPREDIQEMLN. . KPGQFLLRTSEPVKGEKRQFVLSVVGEKKTSANHFVVRESDHKVYV. DKIGFPT
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Template Sequence  GTKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGD. . . YTLCVSCEGK. . VEHYRIMYHASKLSIDEEVYFEN
Template Known Secondary structure  SSSS
TTB

S

T
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TT

SSSTT
...TT..TTSSSSS
BSS
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   74.....80.........90.........100.........110..... ....120..... ....130.........140........
 
   80.........90.........100.........110 .........120.........130.........140.........150....
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Query Sequence  IIELVNHYVSTKESFSTKDGTVKAVLKQAVE. . . . . RQKWELYHEDVELTKKLGEGAFGEVWKGKLLKILDANHQPVLVA
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Template Sequence  LMQLVEHYTTDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG. . . . . . . . NKVA
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TTSSS


SB


SS
TT
B

GGG

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   149150.........160.........170.........180.........190.........200.........210...... ...220
 
   155....160.........170.........180.........190....... ..200.........210......... 220.........230
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Query Sequence  VKTAKLESMTKEQIKEIMREARLMRNLDHINVVKFFGVAAGTE. PLYVIMELADGGALDSALGKLH. . . FPMIKKYELIY
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Template Sequence  VKCIKNDATAQ. . . . AFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL
Template Known Secondary structure  SS
TTS....TT


TTB


SSS



TT
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TTT

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   221........230. ........240.........250.........260.........270.........280.........290......
 
   231........240.........250.........260..
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Query Sequence  QAANGLAYIHEKNLMHRDVAARNCLYGGGQVL
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Template Sequence  DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVA
Template Known Secondary structure  TT
B
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GGG
TT

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   297..300.........310.........320........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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