Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence99.55%DateSat Apr 13 13:04:39 BST 2013
Rank342Aligned Residues106
% Identity21%Templatec2crhA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:vav proto-oncogene; PDBTitle: solution structure of the sh2 domain of human proto-2 oncogene protein vav1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20...... ...30.........40.........50.........60.........70... ......
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Query Sequence  DKDLLHQKYYHGLLPREDIQEMLN. . KPGQFLLRTSEPVKGEKRQFVLSVVGEKKTSANHFVVRESDHKVYVD. KIGFPT
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Template Sequence  PQDLSVHLWYAGPMERAGAESILANRSDGTFLVRQRVKDAAE. . . FAISIKYNVE. . VKHIKIMTAEGLYRITEKKAFRG
Template Known Secondary structure  SS
GGGSSSB

S

TTTS
TT

SSTT

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TTSSTT

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   20.........30.........40.........50.........60. ........70. ........80.........90....
 
   80.........90.........100.........110...
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Query Sequence  IIELVNHYVSTKESFSTKDGTVKAVLKQAVERQK
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Template Sequence  LTELVEFYQQNSLKDCFKSLDTTLQFPFKEPEKR
Template Known Secondary structure  TTS
GGGT
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   95....100.........110.........120........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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