Phyre 2 alignment of O61768 with c1i7mD_

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Job Description | O61768
Confidence | 20.87% | Date | Sat Apr 13 13:04:39 BST 2013
Rank | 456 | Aligned Residues | 37
% Identity | 24% | Template | c1i7mD_
PDB info | PDB header:lyase | Chain: D: PDB Molecule:s-adenosylmethionine decarboxylase beta chain; | PDBTitle: human s-adenosylmethionine decarboxylase with covalently bound2 pyruvoyl group and complexed with 4-amidinoindan-1-one-2'-3 amidinohydrazone
Resolution | 2.24 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | Y | H | G | L | . | . | . | . | . | L | P | R | E | D | I | Q | E | M | L | N | K | P | G | Q | F | L | L | R | T | S | E | P | V | K | G | E | K | R | Q | F | V | L | S
Query Conservation |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | W | F | S | G | S | G | D | L | R | T | I | P | R | S | E | W | D | I | L | L | K | D | V | Q | C | S | I | I | . | . | S | V | T | K | T | D | K | Q | E | A | Y | V | L | S
Template Known Secondary structure |  |  |  |  |  |  | S |  | G | G | G | S |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  |  | . | . |  |  |  |  |  | S | S |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1017 | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . |  |  | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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