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Job DescriptionO61768
Confidence97.46%DateSat Apr 13 13:04:39 BST 2013
Rank415Aligned Residues122
% Identity29%Templatec3hamA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: structure of the gentamicin-aph(2")-iia complex
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170.........180.........190.........200....
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Query Sequence  KKLGEGAFGEVWKGKLLKILDANHQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLDHINVVKFFGVAAGTEPLYVIME
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Template Sequence  RYLSSGDDSDTFLC. . . . . . . . . . . NEQYVVKVPK. . . . RDSVRISQKREFELYRFLENCKLSYQIPAVVYQSDRFNIMK
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SS...........TTTS....SSTTS

SSB




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   22.......30..... ....40..... ....50.........60.........70.........80......
 
   205....210.........220.........230.........240....
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Query Sequence  LADGGALDSALGKLHFPMIKKYELIYQAANGLAYIHEKNL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YIKGERITYEQYHK. LSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML
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B


TT.S
S


TTSTTB

TT


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   87..90.........100 .........110.........120.........130.........140.........150.........160.....
 
   245....250.........260..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . MHRDVAARNCLYGGGQVL
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Template Sequence  EHIETIYENILNNAVLFKYTPCLVHNDFSANNMIFRNNRLF
Template Known Secondary structure  T
GGGG




S

SGGGTT
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   166...170.........180.........190.........200......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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