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Job DescriptionO61768
Confidence99.55%DateSat Apr 13 13:04:39 BST 2013
Rank353Aligned Residues86
% Identity22%Templatec2c9wA_
PDB info PDB header:transcription regulationChain: A: PDB Molecule:suppressor of cytokine signaling 2; PDBTitle: crystal structure of socs-2 in complex with elongin-b and2 elongin-c at 1.9a resolution
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20....... ..30.........40.........50.........60.........70.. .
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Query Sequence  KDLLHQKYYHGLLPREDIQEMLNK. . PGQFLLRTSEPVKGEKRQFVLSVVGEKKTSANHFVVRESDHKVYV. . . . . . . . D
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Template Sequence  RELGQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYL. . . LTISVKTSAG. . PTNLRIEYQDGKFRLDSIICVKSK
Template Known Secondary structure  TS
B
TT

TTS
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STT
S...TT..TT
TTTTTGGG
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   41........50.........60.........70.........80. ........90. ........100.........110.....
 
   74.....80.........90....
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Query Sequence  KIGFPTIIELVNHYVSTKESF
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Template Sequence  LKQFDSVVHLIDYYVQMCKHL
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BS
T


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   116...120.........130......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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