Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence99.66%DateSat Apr 13 13:04:39 BST 2013
Rank311Aligned Residues109
% Identity25%Templatec2eo6A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:b-cell linker protein; PDBTitle: solution structure of the sh2 domain from mouse b-cell2 linker protein blnk
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20..... ....30.........40.........50.........60.........70. ...
Predicted Secondary structure 











...




















.....

Query SS confidence 






















. . .













































. . . . .


Query Sequence  DKDLLHQKYYHGLLPREDIQEML. . . NKPGQFLLRTSEPVKGEKRQFVLSVVGEKKTSANHFVVRESDHKVY. . . . . VDK
Query Conservation     
    



 
 
  

 

...   
 



 
    
     


             
        .....   
Alig confidence 






















...















.




























.....


Template Conservation     
    

 
 
 
 


 

     

 



 
    
.   
 


     
 
  
          

      
Template Sequence  EAELLGKPWYAGACDRKSAEEALHRSNKDGSFLIRKSSGHDS. KQPYTLVAFFNKRVYNIPVRFIEATKQYALGKKKNGE
Template Known Secondary structure  TTTT
SSS



TT
B

STT
S.S
STT
TTTT
SSS

TT
Template Predicted Secondary structure 























.














Template SS confidence 















































































   17..20.........30.........40.........50........ .60.........70.........80.........90.....
 
   75....80.........90.... .....100.........110..
Predicted Secondary structure 












..

















Query SS confidence 



















. .

















Query Sequence  IGFPTIIELVNHYVSTKESF. . STKDGTVKAVLKQAVERQ
Query Conservation       
  

          ..                  
Alig confidence 



















..

















Template Conservation    
 

  

  
    
 
            
  

   
Template Sequence  EYFGSVVEIVNSHQHNPLVLIDSQNNTKDSTRLKYAVKVS
Template Known Secondary structure 

BSSS





SSS









B



Template Predicted Secondary structure 























Template SS confidence 







































   96...100.........110.........120.........130.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D