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Job DescriptionO61768
Confidence97.02%DateSat Apr 13 13:04:39 BST 2013
Rank420Aligned Residues124
% Identity26%Templatec3tdvB_
PDB info PDB header:transferaseChain: B: PDB Molecule:gentamicin resistance protein; PDBTitle: structure of the gdp complex of wild-type aminoglycoside 2'-2 phosphotransferase-iiia
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140.........150.........160.........170.........180.........190.........200....
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Query Sequence  KKLGEGAFGEVWKGKLLKILDANHQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLDHINVVKFFGVAAGTEPLYVIME
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Template Sequence  ESLGEGFRNYAILV. . . . . . . . . . . NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR
Template Known Secondary structure 
SS...........TTTSSGGG
SSB



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   25....30........ .40.........50.........60.........70.........80.........90...
 
   205....210.........220.........230.........240....
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Query Sequence  LADGGALDSALGKLHFPMIKKYELIYQAANGLAYIHEKNL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KVQGQILGEDGMAV. FPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL
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B

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   94.....100....... ..110.........120.........130.........140.........150.........160.........170..
 
   245....250.........260
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Query Sequence  . . . . . . . . . . . . . . . . . . . . MHRDVAARNCLYGGGQ
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Template Sequence  TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNS
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GGG
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   173......180.........190.........200........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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