Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence99.95%DateSat Apr 13 13:04:39 BST 2013
Rank37Aligned Residues149
% Identity32%Templatec2ivsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase receptor PDBTitle: crystal structure of non-phosphorylated ret tyrosine kinase2 domain
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150.........160.........170.........180.........190.
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  QKWELYHEDVELTKKLGEGAFGEVWKGKLLKILDANHQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLDHINVVKFFG
Query Conservation                 

 
 

 
                 



                 
        
        
Alig confidence 






























.















.






























Template Conservation      
          

 
 

 


     .         



 
 .             

     
 




    
Template Sequence  PKWEFPRKNLVLGKTLGEGEFGKVVKATAFH. LKGRAGYTTVAVKMLK. ENASPSELRDLLSEFNVLKQVNHPHVIKLYG
Template Known Secondary structure  TTTB

GGG
SSST.GGG
SS

.TT

TT


TTB

Template Predicted Secondary structure 









.







.














Template SS confidence 















































































   715....720.........730.........740..... ....750.........760. ........770.........780.........790..
 
   192.......200.........210......... 220.........230.........240.........250.........260..
Predicted Secondary structure 









.........













Query SS confidence 



























. . . . . . . . .










































Query Sequence  VAAGTEPLYVIMELADGGALDSALGKLH. . . . . . . . . FPMIKKYELIYQAANGLAYIHEKNLMHRDVAARNCLYGGGQVL
Query Conservation              
      
   
    .........           

   
 


   






  


     
 
Alig confidence 



























.........










































Template Conservation           

 
    
 
   
                                 
        
    
        
Template Sequence  ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLRALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKM
Template Known Secondary structure 
SSSS


TT
BTTTSTT


TT



SGGGTTT
Template Predicted Secondary structure 














































Template SS confidence 















































































   793......800.........810.........820.........830.........840.........850.........860.........870..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D