Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence100.00%DateSat Apr 13 13:04:39 BST 2013
Rank11Aligned Residues132
% Identity30%Templatec3qa8H_
PDB info PDB header:immune system, signaling proteinChain: H: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta
Resolution3.60 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   122.......130.........140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 




































..
Query SS confidence 













































































. .
Query Sequence  ELTKKLGEGAFGEVWKGKLLKILDANHQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLDHINVVKFFGVAAGTEPL. .
Query Conservation       

 
 

 
                 



                 
        
                ..
Alig confidence 




















......












.




































..
Template Conservation 

   

 
 

 

      ......    



 
   .           
  

  
 
 


              
Template Sequence  EMKERLGTGGFGYVLRWIHQD. . . . . . TGEQVAIKQCRQE. LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP
Template Known Secondary structure 






B
SSSB





TT......TT





S
.



BTTB



TTT



T
Template Predicted Secondary structure 







......




.














Template SS confidence 















































































   16...20.........30...... ...40......... 50.........60.........70.........80........
 
   200.........210......... 220.........230.........240.........250.........260
Predicted Secondary structure  ....




....











Query SS confidence  . . . .



















. . . .








































Query Sequence  . . . . YVIMELADGGALDSALGKLH. . . . FPMIKKYELIYQAANGLAYIHEKNLMHRDVAARNCLYGGGQ
Query Conservation  ....    
      
   
    ....           

   
 


   






  


     
Alig confidence  ....



















....








































Template Conservation      





  

 
   
        
 
     
  

  

 


   







 



    
Template Sequence  NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP
Template Known Secondary structure  TSS




SS
BSSS
TT


SSTTB





STT

S
Template Predicted Secondary structure 



























Template SS confidence 




































































   8990.........100.........110.........120.........130.........140.........150.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D