Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence100.00%DateSat Apr 13 13:04:39 BST 2013
Rank7Aligned Residues252
% Identity27%Templatec4fl2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:tyrosine-protein kinase syk; PDBTitle: structural and biophysical characterization of the syk activation2 switch
Resolution2.19 Å
Model Dimensions (Å)X:81.123 Y:67.555 Z:45.042

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20...... ...30.........40.........50.........60.........70.......
Predicted Secondary structure 













....
























Query SS confidence 
























. . . .


















































Query Sequence  TDKDLLHQKYYHGLLPREDIQEMLN. . . . KPGQFLLRTSEPVKGEKRQFVLSVVGEKKTSANHFVVRESDHKVYVDKIGF
Query Conservation      
    



 
 
  

 

 ....  
 



 
    
     


             
              
Alig confidence 
























....













....
































Template Conservation           
 

 
 
 


  
      

 



 
    ....   

      
 
  
     
   
     
Template Sequence  ATTAHEKMPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNG. . . . SYALCLLHEGKVLHYRIDKDKTGKLSIPEGKKF
Template Known Secondary structure  TTS
GGGSTTB

S

SSS

TT
TTT....TT
TTS
STT


B
Template Predicted Secondary structure 

























....














Template SS confidence 















































































   159160.........170.........180.........190.........200. ........210.........220.........230....
 
   78.80.........90.........100. ........110.........120...... ...130......
Predicted Secondary structure 
















.............




















........





Query SS confidence 























. . . . . . . . . . . . .
























. . . . . . . .









Query Sequence  PTIIELVNHYVSTKESFSTKDGTV. . . . . . . . . . . . . KAVLKQAVERQKWELYHEDVELTKK. . . . . . . . LGEGAFGEVW
Query Conservation    
  

                 .............                         ........

 
 

 
 
Alig confidence 























.............
























........









Template Conservation   

  

  
      
                                                     

 
 

 
 
Template Sequence  DTLWQLVEHYSYKADGLLRVLTVPCQKIGTQREALPMDTEVYESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVK
Template Known Secondary structure  SSTTB
TTSSS


SB


S


TT

GGGSGGGS
GGGSTTS


SSSB

GGGTT
Template Predicted Secondary structure 



















































Template SS confidence 















































































   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   137..140.........150.........160.........170.........180.........190.........200.........210......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  KGKLLKILDANHQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLDHINVVKFFGVAAGTEPLYVIMELADGGALDSALG
Query Conservation                  



                 
        
                    
      
   
 
Alig confidence 





....


















































.

















Template Conservation        ....      



 
               
   
  
 

 

 
 
      .  

 
    


   
 
Template Sequence  KGYYQM. . . . KKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES. WMLVMEMAELGPLNKYLQ
Template Known Secondary structure  ....TT
SGGG
GGG


TTB

SSS.

TT
B
Template Predicted Secondary structure  ....














.





Template SS confidence 















































































   387..390.. .......400.........410.........420.........430.........440... ......450.........460.
 
   217.. 220.........230.........240.........250.........260..
Predicted Secondary structure 

.













Query SS confidence 


.










































Query Sequence  KLH. FPMIKKYELIYQAANGLAYIHEKNLMHRDVAARNCLYGGGQVL
Query Conservation     .           

   
 


   






  


     
 
Alig confidence 


.










































Template Conservation                 

   
  

   





   



      
Template Sequence  QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA
Template Known Secondary structure 
TTS
TT


S

SGGGTT
Template Predicted Secondary structure 






















Template SS confidence 














































   462.......470.........480.........490.........500........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D