Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence99.60%DateSat Apr 13 13:04:39 BST 2013
Rank322Aligned Residues106
% Identity12%Templatec2gsbA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:ras gtpase-activating protein 1; PDBTitle: solution structure of the second sh2 domain of human ras2 gtpase-activating protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20...... ...30.........40.........50.........60.........70.......
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Query Sequence  MTDKDLLHQKYYHGLLPREDIQEMLN. . . KPGQFLLRTSEPVKGEKRQFVLSVVGEKKTSANHFVVRESDHKVYVDKIGF
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Template Sequence  REEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGD. . . YSLYFRTNENIQRFKICPTP. NNQFMMGGRYY
Template Known Secondary structure  S


SGGG
SSB

SS
T

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SSSTT
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T.TTSS

B
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   8.10.........20.........30.........40.........50.. .......60.........70.. .......80...
 
   78.80.........90.........100.........110
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Query Sequence  PTIIELVNHYVSTKESFSTKDGTVKAVLKQAVE
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Template Sequence  NSIGDIIDHYRKEQIVEGYYLKEPVPMQDQSGP
Template Known Secondary structure  S
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   84.....90.........100.........110......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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