Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence90.93%DateSat Apr 13 13:04:39 BST 2013
Rank441Aligned Residues105
% Identity20%Templatec3csvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160.........170.........180.........190.........200.........210.........220.......
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Query Sequence  HQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLDHINVVKFFGVAAGTEPLYVIMELADGGALDSALGKLHFPMIKKYE
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Template Sequence  PTGAKAVLXDWSPEEGGDTQPFVDLAQYLRNLDISAPEIY. . . . . AEEHARGLLLIEDLGDALFTEVINNDPA. . . QEXP
Template Known Secondary structure  TT



TTTT

STT
B


.....TTTT



S
B
GG...G
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   40.........50.........60.........70......... 80.........90.........100....... ..110.
 
   228.230.........240.... .....250.
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Query Sequence  LIYQAANGLAYIHEKNL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MHRDVAA
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Template Sequence  LYRAAVDLLIHLHDAQTPELARLDPETLSEXTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEGDXVFVHRDFHA
Template Known Secondary structure  TS





B

TTTTSS



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S

SG
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   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   252.......260
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Query Sequence  RNCLYGGGQ
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Template Sequence  QNLLWLPER
Template Known Secondary structure  GG
TTS
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   192.......200
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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