Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence99.82%DateSat Apr 13 13:04:39 BST 2013
Rank254Aligned Residues127
% Identity20%Templatec3famA_
PDB info PDB header:transferaseChain: A: PDB Molecule:carbon catabolite-derepressing protein kinase; PDBTitle: crystal structure of the protein kinase domain of yeast amp-2 activated protein kinase snf1
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124..... 130.........140.........150.........160.........170.........180.........190.........200..
Predicted Secondary structure 





.





























Query SS confidence 





.








































































Query Sequence  TKKLGE. GAFGEVWKGKLLKILDANHQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLDHINVVKFFGVAAGTEPLYVI
Query Conservation     

 .
 

 
                 



                 
        
                   
Alig confidence 





.












......














....


































Template Conservation 
  

 

 
 

       ...... 
  



 
     ....      

 

  
 




             

Template Sequence  GAHIGNYQIVKKVKLAYHTT. . . . . . TGQKVALKIINKKVM. . . . QGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV
Template Known Secondary structure 

B


B
S



TT......T


S


....


TTB


SS
Template Predicted Secondary structure 






......



....

















Template SS confidence 















































































   4950.........60........ .70.........80... ......90.........100.........110........
 
   203......210.........220.........230.........240.........250.........260
Predicted Secondary structure 















Query SS confidence 

























































Query Sequence  MELADGGALDSALGKLHFPMIKKYELIYQAANGLAYIHEKNLMHRDVAARNCLYGGGQ
Query Conservation   
      
   
               

   
 


   






  


     
Alig confidence 

























































Template Conservation   
     
                     
   
                        
Template Sequence  IEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL
Template Known Secondary structure 


TSSS

TT





SGGG
TTS
Template Predicted Secondary structure 































Template SS confidence 

























































   132.......140.........150.........160.........170.........180.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D