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Job DescriptionO61768
Confidence97.16%DateSat Apr 13 13:04:39 BST 2013
Rank419Aligned Residues125
% Identity15%Templatec3r78B_
PDB info PDB header:transferaseChain: B: PDB Molecule:aminoglycoside 3'-phosphotransferase apha1-iab; PDBTitle: crystal structure of the aminoglycoside phosphotransferase aph(3')-ia,2 atp-bound
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130... ......140.........150.........160.........170.........180.. .......190.........200....
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Query Sequence  LGEGAFG. EVWKGKLLKILDANHQPVLVAVKTAKLESMTKEQIKEIMREARLMRNLD. HINVVKFFGVAAGTEPLYVIME
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Template Sequence  DNVGQSGATIYRLY. . . . . . GKPNAPELFLKHGK. . . . . GSVANDVTDEXVRLNWLTAFXPLPTIKHFIRTPDDAWLLTT
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   31........40.... .....50........ .60.........70.........80.........90.........
 
   205....210.........220.........230.........240....
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Query Sequence  LADGGALDSALGKLHFPMIKKYELIYQAANGLAYIHEKNL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRXNNGLVDASDFDDERNGWPVEQVW
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GGGS
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   100.........110.........120.........130.........140.........150.........160.........170.........
 
   245....250.........260..
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Query Sequence  . . . . . . . . . . . . . . . MHRDVAARNCLYGGGQVL
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Template Sequence  KEXHKLLPFSPDSVVTHGDFSLDNLIFDEGKLI
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   180.........190.........200.........210..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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