Return to main results Retrieve Phyre Job Id

Job DescriptionO61768
Confidence99.55%DateSat Apr 13 13:04:39 BST 2013
Rank350Aligned Residues92
% Identity28%Templatec2ci8A_
PDB info PDB header:translationChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: sh2 domain of human nck1 adaptor protein - uncomplexed
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20...... ...30.........40.........50.........60.........70.........80......
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Query Sequence  KYYHGLLPREDIQEMLN. . . KPGQFLLRTSEPVKGEKRQFVLSVVGEKKTSANHFVVRESDHKVYVDKIGFPTIIELVNH
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Template Sequence  PWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPND. . . FSVSLKAQGK. . NKHFKVQLKETVYCIGQRKFSTMEELVEH
Template Known Secondary structure  TT


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SSSTTS...TT..





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   281........290.........300.........310...... ...320...... ...330.........340.........350.....
 
   87..90.........100......
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Query Sequence  YVSTKESFSTKDGTVKAVLK
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Template Sequence  YKKAPIFTSEQGEKLYLVKH
Template Known Secondary structure  S
S
TT






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   356...360.........370.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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