Return to main results Retrieve Phyre Job Id

Job DescriptionQ95PX0
Confidence99.51%DateSat Apr 13 13:19:58 BST 2013
Rank279Aligned Residues59
% Identity31%Templatec3rebD_
PDB info PDB header:protein bindingChain: D: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60..
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Query Sequence  KTKAVVKFTYEPRLEDELGLTKGDFVYVVEKSTDGWWKGEAPNGGVGWFPSNYVEEVEA
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Template Sequence  DIIVVALYDYVSWSPDDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDS
Template Known Secondary structure 

SS
B

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B
TT

SSSTTT

GGG

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   80.........90.........100.........110.........120.........130........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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