Return to main results Retrieve Phyre Job Id

Job DescriptionQ95PX0
Confidence99.82%DateSat Apr 13 13:19:58 BST 2013
Rank99Aligned Residues81
% Identity25%Templatec3gxxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   189190.........200.........210.........220.........230.. .......240....... ..250.........260...
Predicted Secondary structure 

















.




....




Query SS confidence 











































.














. . . .















Query Sequence  QQPWYFGRISRERAEDLLLHGREGEFLVRDSESNPGDLSISMRG. IERNKHFKVQNVDGL. . . . LKIGNRTFVDMNALIN
Query Conservation     

 
   
  
   
     
 



 
        

   .     
  
      ....       
 

  

 
Alig confidence 





.




































.














....















Template Conservation   

 
 .  

 


  
     
 



 
      
 



       
  
       
         
 

 


 
Template Sequence  NHPYYF. PFNGKQAEDYLRSKERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQEXEKEXGKVLVVEGQRYHDLDQIIV
Template Known Secondary structure  T
TTB
.


TTS
TT


STT

TT





SSS
SS
Template Predicted Secondary structure 





.




























Template SS confidence 















































































   910.... .....20.........30.........40.........50.........60.........70.........80.......
 
   264.....270
Predicted Secondary structure 

Query SS confidence 






Query Sequence  HYTTSPI
Query Conservation   
   

Alig confidence 






Template Conservation   
  
  
Template Sequence  EYLQNKI
Template Known Secondary structure 
Template Predicted Secondary structure 



Template SS confidence 






   92......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D