Return to main results Retrieve Phyre Job Id

Job DescriptionE6N0W0
Confidence46.01%DateSat Apr 13 12:48:06 BST 2013
Rank314Aligned Residues234
% Identity8%Templatec4hpqC_
PDB info PDB header:protein transportChain: C: PDB Molecule:atg17; PDBTitle: crystal structure of the atg17-atg31-atg29 complex
Resolution3.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.........80.........90.........100.........110.........120..
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Query Sequence  ELERRRRVLEEEEQRRRAEVEKKEREEEAKKNRERQEKERQAEVERQAELERQRIIEAQREEEEKKRRLEMERRREED. .
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Template Conservation                                                                                  
Template Sequence  ILDSKLNEIPTIRKQVENITRQYQTMLAKVQSQLVESRMKGLRDEFSEEFTNEADQLEQELADFLKSFTDHFDKCSALSS
Template Known Secondary structure 

TTT
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   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   123......130.........140.........150.........160.........170.........180.........190......
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Query Sequence  . . . . . . EKMRKVQMEKAKVKQMQNQKQQENERLAQRQQREKTLQFQLQALDEKVIDVEVDIGKAKEAVAEVTGFIERMRS
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Template Conservation                                                          
      
                
Template Sequence  RSVSPEDAQNLFEIVERDDKDLAAINSLLQDAAIDVASFVRKVNMLLDERDADKAKMQATLSKLLTELRKHEEYISVFEG
Template Known Secondary structure  TS

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   226...230.........240.........250.........260.........270.........280.........290.........300.....
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
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Query Sequence  TRDEKVARIKELQETNQKTAIESQELGHQLLQKQSAHKETTQRKSELEALRRKRDAIRKAIEDAALELSTEKEKSYNQTE
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Template Conservation      
                
             
  
          
   
      
  
                
Template Sequence  ISALIQKFKASCLEDIRQTRNLLDFYANFERSYHNLLKEVKRRKETAAKLSQILKSCETQLEQINTADLRERQMFLLENG
Template Known Secondary structure  SS
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   306...310.........320.........330.........340.........350.........360.........370.........380.....
 
   277.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  IL
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  NY
Template Known Secondary structure  SS
Template Predicted Secondary structure 
Template SS confidence 

   386.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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