Return to main results Retrieve Phyre Job Id

Job DescriptionE6N0W0
Confidence56.81%DateSat Apr 13 12:48:06 BST 2013
Rank297Aligned Residues89
% Identity10%Templatec1m9sA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains.
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   735....740.........750.........760.........770.........780.........790....... ..800.........810.
Predicted Secondary structure 













































...






Query SS confidence 






























































. . .













Query Sequence  GWWEGELIRNGKPIAGWFPGEYVKVLEEAASPATRATAVYDYEASQPDELGFKTGDVIIVTDK. . . SEAEWWSGHREQDP
Query Conservation 
                 
                  


 
 
   


 
  

 
 

  ...    

 
      
Alig confidence 






























































...











..
Template Conservation 



   

                
            
             
    
 
 
 
     


 
    ..
Template Sequence  GWVDTRALNTFYKQSMEKPTRLTRYVSANKAGESYYKVPVADNPVKRGTLAKYKNQKLIVDCQATIEGQLWYRIRTSS. .
Template Known Secondary structure  TTTGGG

TTTTTSSSSS

GGGGGGSTT

TT
SS..
Template Predicted Secondary structure 


































..
Template SS confidence 















































































   538.540.........550.........560.........570.........580.........590.........600.........610.....
 
   812.......820.....
Predicted Secondary structure 







Query SS confidence 













Query Sequence  SKSGLFPSNYVQQQ
Query Conservation 
  
  
 


   
Alig confidence 













Template Conservation     




  
   
Template Sequence  TFIGWTKAANLRAQ
Template Known Secondary structure  SGGG

Template Predicted Secondary structure 




Template SS confidence 













   616...620.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D