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Job DescriptionE6N0W0
Confidence96.46%DateSat Apr 13 12:48:06 BST 2013
Rank232Aligned Residues333
% Identity11%Templatec1ciiA_
PDB info PDB header:transmembrane proteinChain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   36...40.........50.........60.........70.........80......... 90.........100.........110
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Query Sequence  QDNLSKGQAELERRRRVLEEEEQRRRAEVEKKEREEEAKKNRERQEKERQAEVE. . . . . RQAELERQRIIEAQREEEEKK
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Template Sequence  RSDIEKRDKEITAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKTLRAGNADAADITRQEFRLLQAELREYGF
Template Known Secondary structure  TT

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   67..70.........80.........90.........100.........110.........120.........130.........140......
 
   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  RRLEMERRREEDEKMRKVQMEKAKVKQMQNQKQQENERLAQRQQREKTLQFQLQALDEKVIDVEVDIGKAKEAVAEVTGF
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Template Conservation    
        
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Template Sequence  RTEIAGYDALRL. . HTESRMLFADADSLRISPREARSLIEQAEKRQKDAQNADKKAADMLAEYERRKGILDTRLSELEKN
Template Known Secondary structure  ..TT
SSS
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   147..150........ .160.........170.........180.........190.........200.........210.........220....
 
   191........200... ......210.........220.........230.........240.........250........
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Query Sequence  IERMRSTRDEKVA. RIKELQETNQKTAIESQELGHQLLQKQSAHKETTQRKSELEALRRKRDAIRKAIE. . . . . . . . . . .
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Template Conservation                
          
      
      
      
      
      
                   
Template Sequence  GGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQQKNTPDGKTIVSPEKFPGRSSTND
Template Known Secondary structure  SS
TTTS
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   225....230.........240.........250.........260.........270.........280.........290.........300....
 
   259260.........270.........280.........290.........300........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DAALELSTEKEKSYNQTEILKTNKEKYKTDVYSKLVAKREEYRNSFELLV
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Template Conservation                                             
                           
   
    
Template Sequence  SIVVSGDPRFAGTIKITTSAVIDNRANLNYLLSHSGLDYKRNILNDRNPVVTEDVEGDKKIYNAEVAEWDKLRQRLLDAR
Template Known Secondary structure 

S
TTT
S

TS
TS



S

SS
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   305....310.........320.........330.........340.........350.........360.........370.........380....
 
   309310.........320.........330.........340.........350.........360.........370
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Query Sequence  HAQTHARSKIGEFEAKSAPASAAPAPAPAPAPTTTNGFPANFNDAFGEFDKTDASQRFDADF
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Template Conservation          

      
     
       
  
  
 
 
   
  
            
 
Template Sequence  NKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDEL
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   385....390.........400.........410.........420.........430.........440......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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