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Job DescriptionE6N0W0
Confidence99.85%DateSat Apr 13 12:48:06 BST 2013
Rank7Aligned Residues199
% Identity20%Templatec1mv3A_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc
ResolutionUNK
Model Dimensions (Å)X:174.787 Y:149.507 Z:112.941

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   583......590.........600.........610.........620.........630.........640.........650.........660..
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Query Sequence  TTTPIVSPSKASAGAPGAAAGAQYDVVPSDVTLQASETAPQQQLYTVIYDFEAVETTDLALHVGDTILVLEKNDEWWKGR
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Template Sequence  DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAE
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   270.........280.........290.........300.........310.........320.........330.........340.........
 
   663......670.........680.........690.........700.........710.........720.........730.........740..
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Query Sequence  CNGREGIFPANYVEISVQQAGDPTPPTQAPTPAAPPTVLCEAKVVVDFVASAPNQLGIKVGEIVKIREKSAAGWWEGELI
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Template Sequence  ASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   350.........360.........370.........380.........390.
 
   743......750.........760.........770.........780.........790..... ....800........ .810
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Query Sequence  RNGKPIAGWFPGEYVKVLEEAASPATRATAVYDYEASQPDELGFKTGDVIIVT. . . . . DKSEAEWWSGHRE. . . . . . . QD
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Template Sequence  . . . . . NGTVEGGSGAGRLDLPPGFMFKVQAQHDYTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKL
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   392.......400.........410.........420.........430.........440.........450.........460......
 
   811........820....
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Query Sequence  PSKSGLFPSNYVQQ
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Template Sequence  EKCRGVFPENFTER
Template Known Secondary structure  GGT
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   467..470.........480
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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