Return to main results Retrieve Phyre Job Id

Job DescriptionE6N0W0
Confidence47.14%DateSat Apr 13 12:48:06 BST 2013
Rank310Aligned Residues143
% Identity15%Templatec2ocyB_
PDB info PDB header:endocytosis/exocytosisChain: B: PDB Molecule:rab guanine nucleotide exchange factor sec2; PDBTitle: complex of the guanine exchange factor sec2p and the rab2 gtpase sec4p
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.........120... ......130.........140.........150........
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Query Sequence  QEKERQAEVERQAELERQRIIEAQREEEEKKRRLEMERRREEDE. KMRKVQMEKAKVKQMQNQKQQENERLAQRQQREKT
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Template Sequence  LSTQLIESVDKQSHLEEQLNKSLKTIASQKAAIENYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADK
Template Known Secondary structure  TT
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   17..20.........30.........40.........50.........60.........70.........80.........90......
 
   159160.........170...... ...180.........190.........200.........210.........220..
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Query Sequence  LQFQLQALDEKVIDVEVD. IGKAKEAVAEVTGFIERMRSTRDEKVARIKELQETNQKTAIESQEL
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Template Sequence  LNKEVEDLTASLFDEANNXVADARKEKYAIEILNKRLTEQLREKDTLLDTLTLQLKNLKKVXHSL
Template Known Secondary structure  TTT
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   97..100.........110.........120.........130.........140.........150.........160.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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