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Job Description | E6N0W0 | Confidence | 20.90% | Date | Sat Apr 13 12:48:06 BST 2013 |
Rank | 396 | Aligned Residues | 83 |
% Identity | 17% | Template | c2v4hA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:nf-kappa-b essential modulator; |
PDBTitle: nemo cc2-lz domain - 1d5 darpin complex
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Resolution | 2.9 Å |
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134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | V | K | Q | M | Q | N | Q | K | Q | Q | E | N | E | R | L | A | Q | R | Q | Q | R | E | K | T | L | Q | F | Q | L | Q | A | L | D | . |
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E | K | V | I | D | V | E | V | D | I | G | K | A | K | E | A | V | A | E | V | T | G | F | I | E | R | M | R | S | T | R | D | E | K | V | A | R | I | K | E | L | Q | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | L | E | D | L | R | Q | Q | L | Q | Q | A | E | E | A | L | V | A | K | Q | E | L | I | D | K | L | K | E | E | A | E | Q | H | K | I | V | M | E | T | V | P | V | L | K | A | Q | A | D | I | Y | K | A | D | F | Q | A | E | R | H | A | R | E | K | L | V | E | K | K | E | Y | L | Q | E | Q | L | E | Q | L | Q | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
252 | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
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211 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | N | Q | K | T | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | F | N | K | L | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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332 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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