Return to main results Retrieve Phyre Job Id

Job DescriptionE6N0W0
Confidence89.50%DateSat Apr 13 12:48:06 BST 2013
Rank266Aligned Residues177
% Identity15%Templatec3ojaA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:leucine-rich immune molecule 1; PDBTitle: crystal structure of lrim1/apl1c complex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210.........220.........230.........240.........250.........260......
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  VTGFIERMRSTRDEKVARIKELQETNQKTAIESQELGHQLLQKQSAHKETTQRKSELEALRRKRDAIRKAIEDAALELST
Query Conservation                                                                                  
Alig confidence 















































































Template Conservation                   
    
        
   
                    
                       
Template Sequence  ADRLIALKRKEHALLSTERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDG
Template Known Secondary structure 
S


T




Template Predicted Secondary structure 
Template SS confidence 















































































   326...330.........340.........350.........360.........370.........380.........390.........400.....
 
   267..270.........280.........290.........300.........310.........320.........330.........340......
Predicted Secondary structure 



Query SS confidence 















































































Query Sequence  EKEKSYNQTEILKTNKEKYKTDVYSKLVAKREEYRNSFELLVHAQTHARSKIGEFEAKSAPASAAPAPAPAPAPTTTNGF
Query Conservation                            
             
            

                         
Alig confidence 















































































Template Conservation          
                 
                               
      
     
        
Template Sequence  TLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASA
Template Known Secondary structure  TTSS




SS


Template Predicted Secondary structure 
Template SS confidence 















































































   411........420.........430.........440.........450.........460.........470.........480.........490
 
   347..350.........360...
Predicted Secondary structure 
Query SS confidence 
















Query Sequence  PANFNDAFGEFDKTDAS
Query Conservation                   
Alig confidence 
















Template Conservation       

      
  
Template Sequence  NATLQELVVREQNLASQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
















   491........500.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D