Return to main results Retrieve Phyre Job Id

Job DescriptionE6N0W0
Confidence20.90%DateSat Apr 13 12:48:06 BST 2013
Rank396Aligned Residues83
% Identity17%Templatec2v4hA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:nf-kappa-b essential modulator; PDBTitle: nemo cc2-lz domain - 1d5 darpin complex
Resolution2.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160....... ..170.........180.........190.........200.........210
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Query Sequence  KVKQMQNQKQQENERLAQRQQREKTLQFQLQALD. . . EKVIDVEVDIGKAKEAVAEVTGFIERMRSTRDEKVARIKELQE
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Template Sequence  QLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQR
Template Known Secondary structure  T
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   252.......260.........270.........280.........290.........300.........310.........320.........330.
 
   211.....
Predicted Secondary structure 
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Query Sequence  TNQKTA
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Template Sequence  EFNKLK
Template Known Secondary structure  TT

Template Predicted Secondary structure 

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   332.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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