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Job DescriptionE6N0W0
Confidence74.51%DateSat Apr 13 12:48:06 BST 2013
Rank283Aligned Residues316
% Identity9%Templatec2j69D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:bacterial dynamin-like protein; PDBTitle: bacterial dynamin-like protein bdlp
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90.........100.........110..
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Query Sequence  DKRQDNLSKGQAELERRRRVLEEEEQRRRAEVEKKEREEEAKKNRERQEKERQAEVERQAELERQRIIEAQREEEEKKRR
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Template Conservation        
      
          
  
          
          
                              
Template Sequence  ARRIPLLEQDVNELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRYQPELNLFD
Template Known Secondary structure  SSS
STTTTTTTTTT




GGG
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   351........360.........370.........380.........390.........400.........410.........420.........430
 
   113......120.........130.........140.........150.........160.... .....170.........180.........190.
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Query Sequence  LEMERRREEDEKMRKVQMEKAKVKQMQNQKQQENERLAQRQQREKTLQFQLQ. ALDEKVIDVEVDIGKAKEAVAEVTGFI
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Template Conservation                                                                                  
Template Sequence  FLSSGKREAFNAALQKAFEQYITDKSAAWTLTAEKDINAAFKELSRSASQYGASYNQITDQITEKLTGKDVEEDNSPGWA
Template Known Secondary structure  GGSTTSS







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   431........440.........450.........460.........470.........480.........490.........500.........510
 
   192.......200.........210.........220.........230.........240.........250.........260.... .....
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Query Sequence  ERMRSTRDEKVARIKELQETNQKTAIESQELGHQLLQKQSAHKETTQRKSELEALRRKRDAIRKAIEDAALEL. . STEKE
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Template Conservation                                                                           
      
Template Sequence  KWAMGLLSAGFDWKNILLNYFTVIGIGGIITAVTGILLGPIGFALLGLGVGFLQADQARRELVKTAKKELVKHLPQVAHE
Template Known Secondary structure  TS



S
TT
SSTTTTTTSS
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   519520.........530.........540.........550.........560.........570.........580.........590........
 
   270.........280.........290.........300.........310.........320.........330.........340........
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Query Sequence  KSYNQTEILKTNKEKYKTDVYSKLVAKREEYRNSFELLVHAQTHARSKIGEFEAKSAPASAAPAPAPAPAPTTTNGFPA
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Template Conservation      
     
            
 
 
      
     
 
     
  
   
      
   
  

     
 
Template Sequence  QSQVVYNAVKECFDSYEREVSKRINDDIVSRKSELDNLVKQKQTREINRESEFNRLKNLQEDVIAQLQKIEAAYSNLLA
Template Known Secondary structure  S



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   612.......620.........630.........640.........650.........660.........670.........680.........690
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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