Return to main results Retrieve Phyre Job Id

Job DescriptionA2A559
Confidence4.12%DateWed Jul 10 14:28:33 BST 2013
Rank88Aligned Residues14
% Identity50%Templatec3u21B_
PDB info PDB header:transcription regulation, dna bindingChain: B: PDB Molecule:nuclear factor related to kappa-b-binding protein; PDBTitle: crystal structure of a fragment of nuclear factor related to kappa-b-2 binding protein (residues 370-495) (nfrkb) from homo sapiens at 2.183 a resolution
Resolution2.18 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110...
Predicted Secondary structure 


Query SS confidence 













Query Sequence  LFIQEPASAVASLL
Query Conservation 




  





 
Alig confidence 













Template Conservation      
  






Template Sequence  LGINEISSSFFSLL
Template Known Secondary structure 

S
S

S
Template Predicted Secondary structure 

Template SS confidence 













   370.........380...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D