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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank28Aligned Residues185
% Identity18%Templatec4h6yA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:ferm, rhogef and pleckstrin domain-containing protein 1; PDBTitle: crystal strucure of the dh-ph-ph domain of farp1
Resolution4.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60.. .......70.........80......
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Query Sequence  HQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQ. . . LPPGDLDILFSNIDDIIQVSSRFL
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Template Sequence  KAYFIAKEVSTTERTYLKDLEVITSWFQSTVSKEDAMPEALKSLIFPNFEPLHKFHTNFL
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   540.........550.........560.........570.........580.........590.........
 
   87..90.........100.........110.........120.........130.........140......
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Query Sequence  RGLQETACREEEQAHLIGNLFLEFQEEFEQVYKVYCANYDQALLLVKAYQKEPELQKEIQ
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Template Sequence  KEIEQRLALW. . . . . . EGDVMLKNIQGMK. HLAAHLWKHSEALEALENGIKSSRRLENFC
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GG.GSTTTTTT
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   600......... 610.........620.. .......630.........640.........650..
 
   147..150.........160.........170.........180.........190.........200......
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Query Sequence  GIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQKILENTPADASAHPALQRATSALQDV
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Template Sequence  RDFE. . LQKVCYLPLNTFLLRPLHRLMHYKQVLERLCKHHPRDCRA. . . . . . ALAEITEM
Template Known Secondary structure  ..TSSS

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GGGGGT



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   666... 670.........680.........690.........700......... 710.......
 
   207..210.........220.........
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Query Sequence  NGNINEYKMRKEVALKYTKVEQL
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Template Sequence  VAQLHGTMIKMENFQKLHELKKD
Template Known Secondary structure  TTTTGGGT
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   724.....730.........740......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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