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Job Description | A1IGU4 | Confidence | 99.49% | Date | Tue Jul 30 13:18:16 BST 2013 |
Rank | 241 | Aligned Residues | 55 |
% Identity | 42% | Template | c3rebD_ |
PDB info |
PDB header:protein binding | Chain: D: PDB Molecule:tyrosine-protein kinase hck; |
PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain
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Resolution | 3.45 Å |
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607 | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | |
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650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | V | V | A | V | Y | P | F | V | A | R | S | T | H | E | L | S | L | Q | A | G | Q | P | V | T | I | L | E | A | Q | D | K | K | G | N | P | E | W | S | L | V | E | A | . |
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N | G | Q | R | G | Y | V | P | S | N | F | L | A | R | T |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | V | V | A | L | Y | D | Y | V | S | W | S | P | D | D | L | S | F | Q | K | G | D | Q | M | V | V | L | E | E | S | . |
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G | E | W | W | K | A | R | S | L | A | T | R | K | E | G | Y | I | P | S | N | Y | V | A | R | V |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
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. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
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665 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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137 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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