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Job DescriptionA1IGU4
Confidence99.19%DateTue Jul 30 13:18:16 BST 2013
Rank261Aligned Residues189
% Identity17%Templatec2z0vA_
PDB info PDB header:endocytosisChain: A: PDB Molecule:sh3-containing grb2-like protein 3; PDBTitle: crystal structure of bar domain of endophilin-iii
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   266...270.........280.........290....
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Query Sequence  DKEFDDLEERFQWVSLCVKELRNNVVDFM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  DDEFLDXERKIDVTNKVVAEILSKTTEYLQPNPAYRAKLGXLNTVSKIRGQVKTTGYPQT
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   7..10.........20.........30.........40.........50.........60......
 
   295....300.........310.........320.........330.........340.........350...
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Query Sequence  . GNLEVFLSFRPHERSLDIPGGPAEQYCSLARDLQLHAFLQFKQRLRSLVWQPLCSLARA
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Template Sequence  EGLLGDCXLKYGKELGEDSTFGNALIEVGESXKLXAEVKDSLDINVKQTFIDPLQLLQDK
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   67..70.........80.........90.........100.........110.........120......
 
   354.....360.........370.........380.........390.........400.........410..
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Query Sequence  . LAGPQNLIKKRLDKLLDFDRVEEKLLDVGSVTWEEEAARHEYQALNSLLVAELPQFNQL
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Template Sequence  DLKEIGHHLKKLEGRRLDYDYKKKRVGKIP. . DEEVRQAVEKFEESKELAERSXFNFLEN
Template Known Secondary structure  TTTTSS
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   127..130.........140.........150...... ...160.........170.........180....
 
   413......420.........430.........440.........450.......
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Query Sequence  VMQWLGQILCTFVVLQRDLADQVLRRAESTMALLPHHHVSEPDFQ
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Template Sequence  DVEQVS. QLAVFIEAALDYHRQSTEILQELQSKLQXRISAASSVP
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   185....190 .........200.........210.........220........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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