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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank26Aligned Residues185
% Identity28%Templatec1lb1C_
PDB info PDB header:signaling proteinChain: C: PDB Molecule:guanine nucleotide exchange factor dbs; PDBTitle: crystal structure of the dbl and pleckstrin homology2 domains of dbs in complex with rhoa
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.... .....70..
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Query Sequence  GSEDRSLLHQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQLP. . . . . . . . . PGDLDILF
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Template Sequence  EEEESLAILRRHVMNELLDTERAYVEELLCVLEGYAAEMDNPLMAHLISTGLQNKKNILF
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TTGGGG
GGGGGGS
T
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   624.....630.........640.........650.........660.........670.........680...
 
   73......80.........90.........100.........110.........120.........130..
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Query Sequence  SNIDDIIQVSSRFLRGLQETACREEEQAHLIGNLFLEFQEEFEQVYKVYCANYDQALLLV
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Template Sequence  GNMEEIYHFHNRIFLRELESC. . . IDCPELVGRCFLERMEEFQ. IYEKYCQNKPRSESLW
Template Known Secondary structure  TTTTT...SS
GGGTTTTGGG.
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   684.....690.........700.... .....710.........720... ......730.........
 
   133......140.........150.........160.........170.........180.........190..
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Query Sequence  KAYQKEPELQKEIQGIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQKILENTPADASA
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Template Sequence  RQCSDCPFFQECQKKL. . . . . . . DHKLSLDSYLLKPVQRITKYQLLLKEMLKYSK. HCEG
Template Known Secondary structure  TTS.......T
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TTTT
T.TSTT
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   740.........750..... ....760.........770.........780....... ..790.
 
   193......200.........210........
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Query Sequence  HPALQRATSALQDVNGNINEYKMRKE
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Template Sequence  AEDLQEALSSILGILKAVNDSMHLIA
Template Known Secondary structure  TT
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   792.......800.........810.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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