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Job Description | A1IGU4 | Confidence | 29.84% | Date | Tue Jul 30 13:18:16 BST 2013 |
Rank | 312 | Aligned Residues | 89 |
% Identity | 12% | Template | c4hikA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:protection of telomeres protein 1; |
PDBTitle: crystal structure of schizosaccharomyces pombe pot1pc bound to ssdna2 (ggttacggt)
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Resolution | 1.64 Å |
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580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | |
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. | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Q | T | G | T | H | E | D | S | W | L | P | A | P | E | P | T | Q | L | S | V | P | T | V | P | T | M | S | Q | V | . |
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V | A | V | Y | P | F | V | A | R | S | T | H | E | L | S | L | Q | A | G | Q | P | V | T | I | L | E | A | Q | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | D | Y | T | E | N | E | L | F | F | P | X | S | P | Y | T | S | S | S | R | W | R | G | P | F | G | R | F | S | I | R | C | I | L | W | D | E | H | D | F | Y | C | R | N | . |
Y | I | K | E | G | D | Y | V | V | X | K | N | V | R | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
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638 | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | K | G | N | P | E | W | S | L | V | E | A | N | G | Q | R | G | Y | V | P | S | N | F | L | A | R | T | P | S | P | T | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | I | D | H | L | G | Y | L | E | C | I | L | H | G | D | S | A | K | R | Y | N | X | S | I | E | K | V | D | S | E | E | P |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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