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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank11Aligned Residues215
% Identity23%Templatec1foeA_
PDB info PDB header:signaling protein, immune system/signaliChain: A: PDB Molecule:t-lymphoma invasion and metastasis inducing PDBTitle: crystal structure of rac1 in complex with the guanine2 nucleotide exchange region of tiam1
Resolution2.80 Å
Model Dimensions (Å)X:62.908 Y:47.611 Z:44.302

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.. .......70.........80...
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Query Sequence  SLLHQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQ. . . LPPGDLDILFSNIDDIIQVSS
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Template Sequence  DADKLRKVICELLETERTYVKDLNCLXERYLKPLQKETFLTQDELDVLFGNLTEXVEFQV
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   1037..1040.........1050.........1060.........1070.........1080.........1090......
 
   84.....90.........100 .........110.........120.........130.
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Query Sequence  RFLRGLQETACREEEQA. . . . . . . . . . . . HLIGNLFLEFQEEFEQVYKVYCANYDQALLL
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Template Sequence  EFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRF. KLYSAFCASHTKVPKV
Template Known Secondary structure  TTSS
GGG

SGGGGTTGG.GGTTT
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   1097..1100.........1110.........1120.........1130......... 1140.........1150.....
 
   132.......140.........150.........160.........170.........180.........190.
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Query Sequence  VKAYQKEPELQKEIQGIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQKILENTPADAS
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Template Sequence  LVKAKTDTAFKAFLDAQ. . . NPRQQHSSTLESYLIKPIQRVLKYPLLLRELFALTDAESE
Template Known Secondary structure  TTTTT
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TT

GGGSTTTTTS
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   1156...1160.........1170.. .......1180.........1190.........1200.........1210..
 
   192.......200.........210.........220.........230.........240.....
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Query Sequence  AHPALQRATSALQDVNGNINEYKMRKEVALKYTKVEQLSLRERLARINTHTLSK
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Template Sequence  EHYHLDVAIKTXNKVASHINEXQKIHEEFGAVFDQLIAEQTGEKKEVADLSXGD
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   1213......1220.........1230.........1240.........1250.........1260......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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