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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank1Aligned Residues209
% Identity26%Templatec2dx1A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 4; PDBTitle: crystal structure of rhogef protein asef
Resolution2.36 Å
Model Dimensions (Å)X:63.375 Y:43.223 Z:48.142

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.. .......70...
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Query Sequence  QEDQGSEDRSLLHQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQ. . . . LPPGDLDILFS
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Template Sequence  RVNQDAQSSKDQXRTNVINEILSTERDYIKHLRDICEGYVRQCRKRADXFSEEQLRTIFG
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TTT
TTT

T
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   180.........190.........200.........210.........220.........230.........
 
   74.....80.........90.........100.........110.........120.........130...
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Query Sequence  NIDDIIQVSSRFLRGLQETACREEEQAHLIGNLFLEFQEEFEQVYKVYCANYDQALLLVK
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Template Sequence  NIEDIYRCQKAFVKALEQRFNRERPHLSELGACFLEHQADFQ. IYSEYCNNHPNACVELS
Template Known Secondary structure  TTT

SSSGGG


T.T
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   261........270.........280.........290.........300.. .......310.........
 
   134.....140.........150.........160.........170.........180.........190...
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Query Sequence  AYQKEPELQKEIQGIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQKILENTPADASAH
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Template Sequence  RLTKLSKYVYFFEAC. . RLLQKXIDISLDGFLLTPVQKICKYPLQLAELLKYTHPQHRDF
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TS
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   320.........330.... .....340.........350.........360.........370.......
 
   194.....200.........210.........220.........
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Query Sequence  PALQRATSALQDVNGNINEYKMRKEVALKYTKVEQL
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Template Sequence  KDVEAALHAXKNVAQLINERKRRLENIDKIAQWQSS
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   378.380.........390.........400.........410...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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