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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank38Aligned Residues177
% Identity28%Templatec3gf9A_
PDB info PDB header:endocytosisChain: A: PDB Molecule:intersectin 2; PDBTitle: crystal structure of human intersectin 2 rhogef domain
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.. .......70.........80....
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Query Sequence  LLHQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQ. . . LPPGDLDILFSNIDDIIQVSSR
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Template Sequence  ERKRQGYIHELIQTEERYMADLQLVVEVFQKRMAESGFLTEGEMALIFVNWKELIMSNTK
Template Known Secondary structure  TSSS
TT
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   11791180.........1190.........1200.........1210.........1220.........1230........
 
   85....90.........100.........110.........120.........130.........140....
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Query Sequence  FLRGLQETACREEEQAHLIGNLFLEFQEEFEQVYKVYCANYDQALLLVKAYQKEPELQKE
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Template Sequence  LLKALRVRKVQM. . . . . . IGDILAAELSHMQ. AYIRFCSCQLNGAALLQQKTDEDTDFKE
Template Known Secondary structure  TT



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   12391240.........1250 .........1260... ......1270.........1280.........1290.
 
   145....150.........160.........170.........180.........190.........200....
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Query Sequence  IQGIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQKILENTPADASAHPALQRATSALQ
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Template Sequence  FLKKLAS. DPRCKGMPLSSFLLKPMQRITRYPLLIRSILENTPESHADHSSLKLALERAE
Template Known Secondary structure  T.STTTTT

TTTS
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   1300...... ...1310.........1320.........1330.........1340.........1350........
 
   205....210..
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Query Sequence  DVNGNINE
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Template Sequence  ELCSQVNE
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   13591360......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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