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Job DescriptionA1IGU4
Confidence99.55%DateTue Jul 30 13:18:16 BST 2013
Rank203Aligned Residues55
% Identity18%Templatec2j06B_
PDB info PDB header:signal transductionChain: B: PDB Molecule:ras gtpase-activating protein 1; PDBTitle: crystal structure of the rasgap sh3 domain at 1.8 angstrom2 resolution
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   606...610....... ..620.........630.........640......... 650.........660..
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Query Sequence  SQVVAVYPFVAR. STHELSLQAGQPVTILEAQDKKGNPEWSLVEA. . NGQRGYVPSNFLA
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Template Sequence  RRVRAILPYTKVPDTDEISFLKGDXFIVHNELE. . . . DGWXWVTNLRTDEQGLIVEDLVE
Template Known Secondary structure 
SS
B


TTSSB

B
TT

G....GGTTT

GGG
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   282.......290.........300.........310.... .....320.........330.......
 
   663.
Predicted Secondary structure 
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Query Sequence  RT
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Template Sequence  EV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   338.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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