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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank36Aligned Residues175
% Identity22%Templatec1ntyA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:triple functional domain protein; PDBTitle: crystal structure of the first dh/ph domain of trio to 1.7 a
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.. .......70.........80.
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Query Sequence  LHQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQ. . . . . . . LPPGDLDILFSNIDDIIQV
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Template Sequence  RRKEFIMAELIQTEKAYVRDLRECMDTYLWEMTSGVEEIPPGIVNKELIIFGNMQEIYEF
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S


TTTTT
TT
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   1232.......1240.........1250.........1260.........1270.........1280.........1290.
 
   82.......90.........100.........110.........120.........130.........140.
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Query Sequence  SSRFLRGLQETACREEEQAHLIGNLFLEFQEEFEQVYKVYCANYDQALLLVKAYQKEPEL
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Template Sequence  HNNIFLKELEKY. . . EQLPEDVGHCFVTWADKFQ. MYVTYCKNKPDSTQLILEHAGSYFD
Template Known Secondary structure  TT...TT
GGGTTTTTT.TTT
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   1292.......1300... ......1310.........1320.. .......1330.........1340.......
 
   142.......150.........160.........170.........180.........190.........200.
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Query Sequence  QKEIQGIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQKILENTPADASAHPALQRATS
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Template Sequence  EIQQRHG. . . . . . . . LANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGE. . . IKDGLE
Template Known Secondary structure  T........
SS
TTS
TT
TT...
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   1348.1350.... .....1360.........1370.........1380.........1390 ......
 
   202.......210........
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Query Sequence  ALQDVNGNINEYKMRKE
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Template Sequence  VMLSVPKRANDAMHLSM
Template Known Secondary structure  TT
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   1397..1400.........1410...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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