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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank3Aligned Residues196
% Identity27%Templatec2vrwB_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:proto-oncogene vav; PDBTitle: critical structural role for the ph and c1 domains of the2 vav1 exchange factor
Resolution1.85 Å
Model Dimensions (Å)X:58.017 Y:64.406 Z:38.427

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.. .......70.........80.......
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Query Sequence  LHQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQ. LPPGDLDILFSNIDDIIQVSSRFLR
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Template Sequence  DKRCCCLREIQQTEEKYTDTLGSIQQHFMKPLQRFLKPQDMETIFVNIEELFSVHTHFLK
Template Known Secondary structure  TTTTS
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   193......200.........210.........220.........230.........240.........250..
 
   88.90.........100.........110.........120.........130.........140.......
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Query Sequence  GLQETACREEEQAHLIGNLFLEFQEEFEQVYKVYCANYDQALLLVKAYQKEPELQKEIQG
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Template Sequence  ELKDALAGPGAT. . TLYQVFIKYKERFL. VYGRYCSQVESASKHLDQVATAREDVQMKLE
Template Known Secondary structure  SGGGT..TTTGGG.
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   253......260.... .....270........ .280.........290.........300.........
 
   148.150.........160.........170.........180.........190.........200.......
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Query Sequence  IIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQKILENTPADASAHPALQRATSALQDVN
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Template Sequence  ECSQ. RANNGRFTLRDLLMVPMQRVLKYHLLLQELVKHTQ. DATEKENLRLALDAMRDLA
Template Known Secondary structure  .TTS

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   310... ......320.........330.........340........ .350.........360.......
 
   208.210.........220.........
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Query Sequence  GNINEYKMRKEVALKYTKVEQL
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Template Sequence  QCVNEVKRDNETLRQITNFQLS
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   368.370.........380.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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