Return to main results Retrieve Phyre Job Id

Job DescriptionA1IGU4
Confidence99.54%DateTue Jul 30 13:18:16 BST 2013
Rank214Aligned Residues58
% Identity26%Templatec1s1nA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:nephrocystin 1; PDBTitle: sh3 domain of human nephrocystin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   604.....610.........620.........630.........640........ .650.........660..
Predicted Secondary structure 
























.



Query SS confidence 












































.













Query Sequence  TMSQVVAVYPFVARSTHELSLQAGQPVTILEAQDKKGNPEWSLVE. ANGQRGYVPSNFLA
Query Conservation        




 
    



  

 
 

   
      

 

.  
  
 

 


 
Alig confidence 

































....






.













Template Conservation 

    

 

      


   

 
 

    ....  

         
  
  

 
Template Sequence  TGEEYIAVGDFTAQQVGDLTFKKGEILLVIEKKP. . . . DGWWIAKDAKGNEGLVPRTYLE
Template Known Secondary structure 


S
B

SSSS


B
SS
S

S....SS
SSS
STT
Template Predicted Secondary structure 















....









Template SS confidence 



























































   153......160.........170.........180...... ...190.........200........
 
   663..
Predicted Secondary structure 

Query SS confidence 


Query Sequence  RTP
Query Conservation    
Alig confidence 


Template Conservation     
Template Sequence  PYS
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 


   209210.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D