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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank4Aligned Residues219
% Identity23%Templatec3odoA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 1; PDBTitle: crystal structure of the dh/ph domains of p115-rhogef
Resolution2.90 Å
Model Dimensions (Å)X:67.916 Y:59.332 Z:35.214

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   8.10.........20.........30.........40.........50.........60.. ..
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Query Sequence  EASSKSESPEQEDQGSEDRSLLHQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQ. . . LP
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Template Sequence  SPPGWRELVPPDTLHSLPKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAECLFFP
Template Known Secondary structure  S


STTTS
TTS
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   394.....400.........410.........420.........430.........440.........450...
 
   65....70.........80.........90.........100.........110. ........
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Query Sequence  PGDLDILFSNIDDIIQVSSRFLRGLQETACREEEQAHLIGNLFLEFQ. . . . . EEFEQVYK
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Template Sequence  LEELQNIFPSLDELIEVHSLFLDRLMKRRQESGYLIEEIGDVLLARFDGAEGSWFQKISS
Template Known Secondary structure  STTS
S




S
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   454.....460.........470.........480.........490.........500.........510...
 
   120.........130.........140.........150.........160.........170.........
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Query Sequence  VYCANYDQALLLVKAYQKEPELQKEIQGIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLL
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Template Sequence  RFCSRQSFALEQLKAKQRKDPRFCAFVQEAES. RPRCRRLQLKDMIPTEMQRLTKYPLLL
Template Known Secondary structure  TTT
T.SGGGTT

TT
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   514.....520.........530.........540..... ....550.........560.........570..
 
   180.........190.........200.........210.........220........
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Query Sequence  QKILENTPADASAHPALQRATSALQDVNGNINEYKMRKEVALKYTKVEQ
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Template Sequence  QSIGQNT. EEPTEREKVELAAECCREILHHVNQAVRDMEDLLRLKDYQR
Template Known Secondary structure  T
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   573...... 580.........590.........600.........610.........620
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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