Return to main results Retrieve Phyre Job Id

Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank10Aligned Residues216
% Identity24%Templatec3jv3A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:intersectin-1; PDBTitle: structure of sh3e-dh unit of murine intersectin-1l
Resolution2.40 Å
Model Dimensions (Å)X:65.327 Y:47.785 Z:39.385

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60..
Predicted Secondary structure 

















...
Query SS confidence 
























































. . .
Query Sequence  ADEASSKSESPEQEDQGSEDRSLLHQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQ. . .
Query Conservation                          

  

 

  

  

  
          
  ...
Alig confidence 
























































...
Template Conservation            
              
  

 


 

  

  
  
   
   
     
Template Sequence  TDMDPSQQWCSDLHLLDMLTPTERKRQGYIHELIVTEENYVNDLQLVTEIFQKPLTESEL
Template Known Secondary structure  GGS

TT
TTGGGS
TTTT
S
Template Predicted Secondary structure 





















Template SS confidence 



























































   1206...1210.........1220.........1230.........1240.........1250.........1260.....
 
   63......70.........80.........90....... ..100.........110.........120
Predicted Secondary structure 







..



Query SS confidence 


































. .






















Query Sequence  LPPGDLDILFSNIDDIIQVSSRFLRGLQETACREE. . EQAHLIGNLFLEFQEEFEQVYKV
Query Conservation          

  
  
       
  
        ..     

  

         
  
Alig confidence 


































..

















.



Template Conservation 
       

 

  
   
   
  
               
            . 
  
Template Sequence  LTEKEVAMIFVNWKELIMCNIKLLKALRVRKKMSGEKMPVKMIGDILSAQLPHMQ. PYIR
Template Known Secondary structure  S
TT
TT





GGGGT.
Template Predicted Secondary structure 











.
Template SS confidence 



























































   1266...1270.........1280.........1290.........1300.........1310.........1320 ....
 
   121........130.........140.........150.........160.........170.........180
Predicted Secondary structure 










Query SS confidence 



























































Query Sequence  YCANYDQALLLVKAYQKEPELQKEIQGIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQ
Query Conservation 
      
   
                            
   
  




 

 


 
Alig confidence 






























.



























Template Conservation 
      
   
                   .        
   
  




 

 


 
Template Sequence  FCSCQLNGAALIQQKTDEAPDFKEFVKRLAM. DPRCKGMPLSSFILKPMQRVTRYPLIIK
Template Known Secondary structure 
TT.SGGGTT

TT
Template Predicted Secondary structure 




.







Template SS confidence 



























































   1325....1330.........1340.........1350..... ....1360.........1370.........1380...
 
   181........190.........200.........210.........220...
Predicted Secondary structure 




Query SS confidence 










































Query Sequence  KILENTPADASAHPALQRATSALQDVNGNINEYKMRKEVALKY
Query Conservation   


 
     
   
  
      
   


 

  
     
Alig confidence 










































Template Conservation   


 
     
   
  

     
   


     

  

Template Sequence  NILENTPENHPDHSHLKHALEKAEELCSQVNEGVREKENSDRL
Template Known Secondary structure  TTS
TTSTTGGG
Template Predicted Secondary structure 






Template SS confidence 










































   1384.....1390.........1400.........1410.........1420......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D