Return to main results Retrieve Phyre Job Id

Job DescriptionA1IGU4
Confidence99.43%DateTue Jul 30 13:18:16 BST 2013
Rank250Aligned Residues59
% Identity27%Templatec2vknA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:protein ssu81; PDBTitle: yeast sho1 sh3 domain complexed with a peptide from pbs2
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   605....610.........620 .........630.........640.........650.........660..
Predicted Secondary structure 








..


















Query SS confidence 















. .









































Query Sequence  MSQVVAVYPFVARSTH. . ELSLQAGQPVTILEAQDKKGNPEWSLVEANGQRGYVPSNFLA
Query Conservation       




 
    ..



  

 
 

   
      

 

  
  
 

 


 
Alig confidence 















..
















....




















Template Conservation 
    

  
     
  



  

 
 
     .... 

      
  
 

  


Template Sequence  IYKAKALYPYDADDDDAYEISFEQNEILQVSDIEG. . . . RWWKARRANGETGIIPSNYVQ
Template Known Secondary structure  SS
B


SSSTTB

B
TT

TTS....S
TTS
GGG
Template Predicted Secondary structure 




















....






Template SS confidence 



























































   4.....10.........20.........30........ .40.........50.........
 
   663....
Predicted Secondary structure 



Query SS confidence 




Query Sequence  RTPSP
Query Conservation    
  
Alig confidence 




Template Conservation   
   
Template Sequence  LIDGP
Template Known Secondary structure 
Template Predicted Secondary structure 



Template SS confidence 




   60....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D