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Job DescriptionA1IGU4
Confidence99.32%DateTue Jul 30 13:18:16 BST 2013
Rank258Aligned Residues178
% Identity13%Templatec1i49A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:arfaptin 2; PDBTitle: crystal structure analysis of arfaptin
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   263......270.........280.........290.........300.........310 .....
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Query Sequence  RTEDKEFDDLEERFQWVSLCVKELRNNVVDFMGNLEVFLSFRPHERSL. . . . . . . DIPGG
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Template Sequence  RTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQ
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TTT
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   24.....30.........40.........50.........60.........70.........80...
 
   316...320.........330.........340.........350... ......360.........370....
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Query Sequence  PAEQYCSLARDLQLHAFLQFKQRLRSLVWQPLCSLARA. LAGPQNLIKKRLDKLLDFDRV
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Template Sequence  EEFGYNAETQKLLCKNGETLLGAVNF. FVSSINTLVTKTMEDTLMTVKQYEAARLEYDAY
Template Known Secondary structure  .T
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   84.....90.........100......... 110.........120.........130.........140..
 
   375....380.... .....390.........400.........410.........420.
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Query Sequence  EEKLLDVGSV. . . . . . . . . . . . . TWEEEAARHEYQALNSLLVAELPQFNQLVMQWLGQIL
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Template Sequence  RTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQL
Template Known Secondary structure  TTS
SSTT
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   143......150.........160.........170.........180.........190.........200..
 
   422.......430.........440.
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Query Sequence  CTFVVLQRDLADQVLRRAES
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Template Sequence  LLFHNAVSAYFAGNQKQLEQ
Template Known Secondary structure  TT
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   203......210.........220..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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