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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank30Aligned Residues192
% Identity21%Templatec3mpxA_
PDB info PDB header:lipid binding proteinChain: A: PDB Molecule:fyve, rhogef and ph domain-containing protein 5; PDBTitle: crystal structure of the dh and ph-1 domains of human fgd5
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60 .........70........
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Query Sequence  LHQRLAIRELIDTEVSYLHTLRLCASDIRSHL. . . . . . . . . . QQLPPGDLDILFSNIDDI
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Template Sequence  SRALVIAQELLSSEKAYVEXLQHLNLDFHGAVXRALDDXDHEDTLAREELRQGLSELPAI
Template Known Secondary structure  TTT

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   891........900.........910.........920.........930.........940.........950
 
   7980.........90.........100.........110.........120.........130........
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Query Sequence  IQVSSRFLRGLQETACREEEQAHLIGNLFLEFQEEFEQVYKVYCANYDQALLLVKAYQKE
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Template Sequence  HDLHQGILEELEERLSNWESQQ. KVADVFLAREQGFD. HHATHILQFDRYLGLLSENCLH
Template Known Secondary structure  TTTT

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TTTTTT.TT
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   953......960.........970.... .....980........ .990.........1000.........1010
 
   139140.........150.........160.........170.........180.........190........
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Query Sequence  PELQKEIQGIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQKILENTPADASAHPALQR
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Template Sequence  SPRLAAAVREFE. . . . . . . QSTAKHRLLRVVQRLFQYQVLLTDYLNNLCPDSAEYDNTQG
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TTS
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   1011........1020.. .......1030.........1040.........1050.........1060...
 
   199200.........210.........220.........
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Query Sequence  ATSALQDVNGNINEYKMRKEVALKYTKVEQL
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Template Sequence  ALSLISKVTDRANDSXEQGENLQKLVHIEHS
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TT
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   1070.........1080.........1090.........1100
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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