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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank25Aligned Residues184
% Identity26%Templatec3eo2A_
PDB info PDB header:splicingChain: A: PDB Molecule:neuroepithelial cell-transforming gene 1 protein; PDBTitle: crystal structure of the rhogef domain of human neuroepithelial cell-2 transforming gene 1 protein
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.. .......70.........80
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Query Sequence  EDRSLLHQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQ. . . LPPGDLDILFSNIDDIIQ
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Template Sequence  LTTREIRRQEAIYEMSRGEQDLIEDLKLARKAYHDPMLKLSIMSEEELTHIFGDLDSYIP
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TTSS


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   168.170.........180.........190.........200.........210.........220.......
 
   81........90.........100.........110.........120.........130.........140
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Query Sequence  VSSRFLRGLQETACREEEQAHLIGNLFLEFQEEFEQVYKVYCANYDQALLLVKAYQKEPE
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Template Sequence  LHEDLLTRIGEATKPDGTV. EQIGHILVSWLPRLN. AYRGYCSNQLAAKALLDQKKQDPR
Template Known Secondary structure  B
TTS
B.S

GGGGG.GGTTTT
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   228.230.........240...... ...250.........260. ........270.........280.....
 
   141........150.........160.........170.........180.........190.........200
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Query Sequence  LQKEIQGIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQKILENTPADASAHPALQRAT
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Template Sequence  VQDFLQRCLE. . SPFSRKLDLWSFLDIPRSRLVKYPLLLKEILKHTPKEHPDVQLLEDAI
Template Known Secondary structure  ..STT




GGGTTTS
TT
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   286...290..... ....300.........310.........320.........330.........340...
 
   201........210.
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Query Sequence  SALQDVNGNIN
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Template Sequence  LIIQGVLSDIN
Template Known Secondary structure  TT
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   344.....350....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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