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Job DescriptionA1IGU4
Confidence100.00%DateTue Jul 30 13:18:16 BST 2013
Rank23Aligned Residues187
% Identity21%Templatec2rgnB_
PDB info PDB header:signaling protein complexChain: B: PDB Molecule:rhoa/rac/cdc42 exchange factor; PDBTitle: crystal structure of p63rhogef complex with galpha-q and rhoa
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DQGSEDRSLLHQRLAIRELIDTEVSYLHTLRLCASDIRSHLQQ. . . . . LPPGDLDILFSN
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Template Sequence  EEEQKKKALERSMYVLSELVETEKMYVDDLGQIVEGYMATMAAQGVPESLRGRDRIVFGN
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STT


SSSGGGTT
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   150.........160.........170.........180.........190.........200.........
 
   75....80.........90.........100.........110.........120.........130....
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Query Sequence  IDDIIQVSSRFLRGLQETACREEEQAHLIGNLFLEFQEEFEQVYKVYCANYDQALLLVKA
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Template Sequence  IQQIYEWHRDYFLQELQRCLKDP. . . DWLAQLFIKHERRLH. MYVVYCQNKPKSEHVVSE
Template Known Secondary structure  TS
G...GGTTTTT.TSTT
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   210.........220.........230.. .......240....... ..250.........260.....
 
   135....140.........150.........160.........170.........180.........190....
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Query Sequence  YQKEPELQKEIQGIIEAAMPQAGPSGLSFFLVIPLQRITKYPLLLQKILENTPADASAHP
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Template Sequence  FGDSYFEELRQQLG. . . . . . . . HRLQLNDLLIKPVQRIMKYQLLLKDFLKYYNRAGMDTA
Template Known Secondary structure  TS
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S
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   266...270......... 280.........290.........300.........310.......
 
   195....200.........210........
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Query Sequence  ALQRATSALQDVNGNINEYKMRKE
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Template Sequence  DLEQAVEVMCFVPKRCNDMMTLGR
Template Known Secondary structure  GGG
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   318.320.........330.........340.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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