 |
Job Description | A1IGU4 | Confidence | 99.67% | Date | Tue Jul 30 13:18:16 BST 2013 |
Rank | 74 | Aligned Residues | 90 |
% Identity | 26% | Template | c2yt6A_ |
PDB info |
PDB header:cell cycle | Chain: A: PDB Molecule:adult male urinary bladder cdna, riken full- |
PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
|
Resolution | UNK |
|
 |
  |   |
579 | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Q | T | G | T | H | E | D | S | W | L | P | A | P | E | P | T | Q | L | S | V | P | T | V | P | T | M | S | Q | V | V | A | V | Y | P | F | V | A | R | S | T | H | E | L | S | L | Q | A | G | Q | P | V | T | I | L | E | A | Q | D | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|
|
|
|   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |   |   |   | . |
Template Sequence |   |
G | S | S | G | S | S | G | A | S | S | S | F | S | V | V | S | S | S | Y | P | T | G | L | T | G | G | V | T | I | F | V | A | L | Y | D | Y | E | A | R | T | T | E | D | L | S | F | K | K | G | E | R | F | Q | I | I | N | N | T | E | . |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| S | S |
|
| S | S |
|
|  |  |  |  | S | S |
|
|
|
| S | S | T | T | S |
|
|
|
| T | T |
|  |  |  |  |  |  |
| S |
| . |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
| . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
  |
  |   |
639 | 640 | . | . | . | . | . | . | . | . | . | |
|
650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | N | P | E | W | S | L | V | E | A | . |
. |
N | G | Q | R | G | Y | V | P | S | N | F | L | A | R | T | P | S | P | T | P | W | G | W |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|   | . | . |   |
|   |   |
|   |
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
. |
. |
. |
G | D | W | W | E | A | R | S | I | A | T | G | K | S | G | Y | I | P | S | N | Y | V | V | P | A | D | S | I | Q | A | E | E | W |
Template Known Secondary structure |   |
. | . | . | T | T |
|  |  |  |  |  | S | S | S |
|
|  |  |  |  |
| T | T | T |  |  |  | S | S | S |
| T | T | T |  |  |
Template Predicted Secondary structure |   |
. | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
Phyre2 is part of Genome3D |
|