Return to main results Retrieve Phyre Job Id

Job DescriptionQ99M51
Confidence99.94%DateTue Jul 30 13:14:31 BST 2013
Rank25Aligned Residues105
% Identity24%Templatec2gsbA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:ras gtpase-activating protein 1; PDBTitle: solution structure of the second sh2 domain of human ras2 gtpase-activating protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290.........300.........310.........320.......
Predicted Secondary structure 


































Query SS confidence 



























































Query Sequence  YIRPSLTGKFAGNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGKN
Query Conservation     
          
  
   
  
   
      
 



 
        

       
Alig confidence 



























































Template Conservation                

 
 


  

  
      
 



 
        


     
Template Sequence  GSSGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRTNENI
Template Known Secondary structure  S

SS


SGGG
SSB

SS
T

SS
SSSTT

SS
B
Template Predicted Secondary structure 




































Template SS confidence 



























































   4.....10.........20.........30.........40.........50.........60...
 
   328.330... ......340.........350.........360.........370.......
Predicted Secondary structure  .



















Query SS confidence 





.











































Query Sequence  KHFKVQ. LKETVYCIGQRKFSTMEELVEHYKKAPIFTSEQGEKLYLVKHLS
Query Conservation   
  
 .            
 
   

  
   

          
  
  
Alig confidence 





.



























.....










Template Conservation   
  
              
 

  

  
     .....     
  


Template Sequence  QRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQI. . . . . VEGYYLKEPVP
Template Known Secondary structure 



TTTSS

BS
TTS
S.....BTTB






Template Predicted Secondary structure 













.....








Template SS confidence 


















































   64.....70.........80.........90........ .100.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D