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Job DescriptionQ99M51
Confidence99.74%DateTue Jul 30 13:14:31 BST 2013
Rank115Aligned Residues78
% Identity23%Templatec3or8A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   279280.........290.........300.........310.........320.. .......330.....
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Query Sequence  GNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLK. AQGKNKHFKVQLK. .
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Template Sequence  NHPYYF. PFNGKQAEDYLRSKE. RGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQELEK
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   5....10 .........20..... ....30.........40.........50.........60..
 
   336...340.........350........
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Query Sequence  . . . . . . ETVYCIGQRKFSTMEELVEHYKK
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Template Sequence  ENPLALGKVLVVEGQRYHDLDQIIVEYLQ
Template Known Secondary structure  SSTTS

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   63......70.........80.........90.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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