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Job Description | Q99M51 | Confidence | 99.74% | Date | Tue Jul 30 13:14:31 BST 2013 |
Rank | 115 | Aligned Residues | 78 |
% Identity | 23% | Template | c3or8A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcription elongation factor spt6; |
PDBTitle: a tandem sh2 domain in transcription elongation factor spt6
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Resolution | 1.60 Å |
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279 | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
G | N | P | W | Y | Y | G | K | V | T | R | H | Q | A | E | M | A | L | N | E | R | G | H | E | G | D | F | L | I | R | D | S | E | S | S | P | N | D | F | S | V | S | L | K | . |
A | Q | G | K | N | K | H | F | K | V | Q | L | K | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | H | P | Y | Y | F | . |
P | F | N | G | K | Q | A | E | D | Y | L | R | S | K | E | . |
R | G | D | F | V | I | R | Q | S | S | R | G | D | D | H | L | A | I | T | W | K | L | D | K | D | L | F | Q | H | V | D | I | Q | E | L | E | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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5 | . | . | . | . | 10 | |
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. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
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336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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E | T | V | Y | C | I | G | Q | R | K | F | S | T | M | E | E | L | V | E | H | Y | K | K |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | N | P | L | A | L | G | K | V | L | V | V | E | G | Q | R | Y | H | D | L | D | Q | I | I | V | E | Y | L | Q |
Template Known Secondary structure |   |
S | S | T | T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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Phyre2 is part of Genome3D |
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