Phyre 2 alignment of Q99M51 with d1k1za_

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Job Description | Q99M51
Confidence | 99.42% | Date | Tue Jul 30 13:14:31 BST 2013
Rank | 297 | Aligned Residues | 61
% Identity | 20% | Template | d1k1za_
SCOP info | SH3-like barrel | SH3-domain | SH3-domain
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Query Sequence |  | M | A | E | E | V | V | V | V | A | K | F | D | Y | V | A | Q | Q | E | . | . | . | Q | E | L | D | I | K | K | N | E | R | L | W | L | L | D | D | S | K | S | . | . | W | W | R | V | R | N | S | M | . | N | K | T | G | F | V | P | S | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | P | K | M | E | V | F | Q | E | Y | Y | G | I | P | P | P | P | G | A | F | G | G | F | L | R | L | N | P | G | D | I | V | E | L | T | K | A | E | A | E | H | N | W | W | E | G | R | N | T | A | T | N | E | V | G | W | F | P | C | N
Template Known Secondary structure |  |  |  |  |  |  |  |  | S |  | B | S | S |  | S |  |  | S | S | S | S |  |  |  |  |  | B |  | T | T |  |  |  |  |  |  |  |  |  | S | S |  | S |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | S | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | .
|  | 55 | . | . | . | . | 60 | .
Predicted Secondary structure |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |
Query Sequence |  | Y | V | E | R | K | N | S
Query Conservation |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |
Template Sequence |  | R | V | H | P | Y | V | H
Template Known Secondary structure |  | T |  |  |  | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |
|  | 72 | . | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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