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Job DescriptionQ99M51
Confidence99.93%DateTue Jul 30 13:14:31 BST 2013
Rank38Aligned Residues112
% Identity25%Templatec2vifA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:suppressor of cytokine signalling 6; PDBTitle: crystal structure of socs6 sh2 domain in complex with a c-kit2 phosphopeptide
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   241........250.........260.........270.........280.........290.........300
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Query Sequence  LVPKNYVTIMQNNPLTSGLEPSPPQCDYIRPSLTGKFAGNPWYYGKVTRHQAEMALNERG
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Template Sequence  MVQSSLTEELKK. . . . . . . . . . . . . . . . . . . . . . . . LAKQGWYWGPITRWEAEGKLANV.
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   0.........10. ........20.........30....
 
   301........310.........320.........330.........340.. .......350......
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Query Sequence  HEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCIG. . . . QRKFSTMEELVEHY
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Template Sequence  PDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHS
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   402.......410.........420.........430.........440.........450.........460.
 
   357.. 360.........370.......
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Query Sequence  KKA. . . . . . . . . . PIFTSEQGEKLYLVKHLS
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Template Sequence  IGDSENGAFCYSRSRLPGSATYPVRLTNPVS
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   462.......470.........480.........490..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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