Phyre 2 alignment of Q99M51 with c2d8jA_

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Job Description | Q99M51
Confidence | 99.64% | Date | Tue Jul 30 13:14:31 BST 2013
Rank | 230 | Aligned Residues | 60
% Identity | 32% | Template | c2d8jA_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:fyn-related kinase; | PDBTitle: solution structure of the sh3 domain of fyn-related kinase
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . |  | . | . | . | . | . | 40 | . | . | . | . | . | . |  |  |  |  |  |  |  |  | . | . | . | 50 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | E | V | V | V | V | A | K | F | D | Y | V | A | Q | Q | E | Q | E | L | D | I | K | K | N | E | R | L | W | L | L | D | D | . | S | K | S | W | W | R | V | R | N | S | M | N | . | . | . | . | . | . | . | . | K | T | G | F | V | P | S | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | Q | Y | F | V | A | L | F | D | Y | Q | A | R | T | A | E | D | L | S | F | R | A | G | D | K | L | Q | V | L | D | T | S | H | E | G | W | W | L | A | R | H | L | E | K | K | G | T | G | L | G | Q | Q | L | Q | G | Y | I | P | S | N
Template Known Secondary structure |  |  |  |  |  |  |  | S | S |  | B |  |  | S | S | S | S | B |  |  | B |  | T | T |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  | S | S |  |  | S | S |  |  |  |  | S |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | .
|  | 55 | . | . | . | . | 60 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | V | E | R | K | N | S | A | R
Query Conservation |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | V | A | E | D | S | G | P | S
Template Known Secondary structure |  | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |
|  | 67 | . | . | 70 | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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