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Job DescriptionQ99M51
Confidence99.56%DateTue Jul 30 13:14:31 BST 2013
Rank286Aligned Residues55
% Identity16%Templatec2ke9A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:caskin-2; PDBTitle: nmr solution structure of the caskin sh3 domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10....... ..20.........30.........40.. .......50........
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Query Sequence  VVVAKFDYVAQQ. EQELDIKKNERLWLLDDSKSWWRVR. . . . . . NSMNKTGFVPSNYVER
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Template Sequence  KVRALKDFWNLHDPTALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVEV
Template Known Secondary structure  SS
B


S
TTB

B
TT
S
SS
SS


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   285....290.........300.........310.........320.........330.........340....
 
   5960
Predicted Secondary structure 

Query SS confidence 

Query Sequence  KN
Query Conservation    
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Template Conservation 
 
Template Sequence  VS
Template Known Secondary structure  S
Template Predicted Secondary structure 
Template SS confidence 

   345.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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