Return to main results Retrieve Phyre Job Id

Job DescriptionQ99M51
Confidence99.82%DateTue Jul 30 13:14:31 BST 2013
Rank101Aligned Residues81
% Identity23%Templatec3gxxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   279280.........290.........300.........310.........320... ......330.......
Predicted Secondary structure 





















.




Query SS confidence 












































.













Query Sequence  GNPWYYGKVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKA. QGKNKHFKVQLKET
Query Conservation     
  
   
  
   
      
 



 
        

   .     
  
     
Alig confidence 





.













.






















.













Template Conservation   

 
 .  

 


  
   .  
 



 
      
 



       
  
     
Template Sequence  NHPYYF. PFNGKQAEDYLRSK. ERGDFVIRQSSRGDDHLAITWKLDKDLFQHVDIQEXEK
Template Known Secondary structure  T
TTB
.


TTS.
TT


STT

TT

Template Predicted Secondary structure 





.





.















Template SS confidence 



























































   910.... .....20........ .30.........40.........50.........60......
 
   338 .340.........350.........360.
Predicted Secondary structure  ....







Query SS confidence 
. . . .






















Query Sequence  V. . . . YCIGQRKFSTMEELVEHYKKAPI
Query Conservation   ....       
 
   

  
   

Alig confidence 
....






















Template Conservation    
         
 

 


  
  
  
Template Sequence  EXGKVLVVEGQRYHDLDQIIVEYLQNKI
Template Known Secondary structure 



SSS
SS
Template Predicted Secondary structure 










Template SS confidence 



























   67..70.........80.........90....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D