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Job DescriptionQ99M51
Confidence97.82%DateTue Jul 30 13:14:31 BST 2013
Rank315Aligned Residues187
% Identity19%Templatec3h41A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140..... ....150.........160.........170.....
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Query Sequence  ELSLIKGTKVIVMEKCSDGWWR. . . . . . . . GSYNGQIGWFPSNYVTEEGDSPLGDHVGSL
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Template Sequence  ETQALLGQEVTVVDKKGDWVKVLVHGQPTPRNEEGYPGWXPEKQLTYNQEFADKTNEPFV
Template Known Secondary structure  TT
TTTT

BTTBSS
GGG

TTTS
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   83......90.........100.........110.........120.........130.........140..
 
   176...180.........190.........200.........210.........220.........230.....
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Query Sequence  SEKLAAVVNNLNTGQVLHVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKI
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Template Sequence  LVTKPTA. . . . . . . . . . . . . . ILYINPSEKHKSLEVSYNTRLPLLSE. . . DTISYRVLLP
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SS..............SS
TT

TT
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T
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   143...... 150.........160.........170..... ....180.....
 
   236...240.........250.........260.........270.........280.....
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Query Sequence  NGMVGLVPKNYVTIMQNNPLTSGLEPSPPQCDYIRPSLTGKFAGNPWYYG. . . . . . . . . .
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Template Sequence  NGQKAWLRKNDG. . . . . . TFYRSQNDIPTPAADDLINTGKXFLGLPYIWAGTSGFGFDSG
Template Known Secondary structure  TS
GGG......S
GGGS



TTTT
B

TT
TT

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   186...190....... ..200.........210.........220.........230.........
 
   286...290.........300.........310.........320...... ...330..
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Query Sequence  . . . . . . . . . . . KVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLKAQGK. . NKHFKV
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Template Sequence  FTHTIYKSHGITIPRDSGPQ. . . . . . SRNGVAVDKEHLQKGDLIFFAHDQGKGSVHHVAX
Template Known Secondary structure  TTT



SS......TTSS
GGG

TT
TS
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   241........250.........260 .........270.........280.........290....
 
   333......
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Query Sequence  QLKETVY
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Template Sequence  YIGDGNX
Template Known Secondary structure  TT
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   295....300.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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