30/07/2013 21:50:27 : INFO  : Run start: Tue Jul 30 21:50:27 BST 2013
30/07/2013 21:50:27 : INFO  : Initialised job
30/07/2013 21:50:27 : INFO  : Initialised job:
Sequence
>batch____
MAEEVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKSWWRVRNSMNKTGFVPSNYVERKN
SARKASIVKNLKDTLGIGKVKRKPSVPDTASPADDSFVDPGERLYDLNMPAFVKFNYMAE
REDELSLIKGTKVIVMEKCSDGWWRGSYNGQIGWFPSNYVTEEGDSPLGDHVGSLSEKLA
AVVNNLNTGQVLHVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKINGMVG
LVPKNYVTIMQNNPLTSGLEPSPPQCDYIRPSLTGKFAGNPWYYGKVTRHQAEMALNERG
HEGDFLIRDSESSPNDFSVSLKAQGKNKHFKVQLKETVYCIGQRKFSTMEELVEHYKKAP
IFTSEQGEKLYLVKHLS

30/07/2013 21:50:27 : INFO  : Checked sequence
30/07/2013 21:50:27 : INFO  : Finding homologues with PSI-BLAST
30/07/2013 21:50:27 : INFO  : PSI-BLAST 3 iterations
30/07/2013 21:52:17 : INFO  : PSI-BLAST 5 iterations
30/07/2013 21:54:50 : INFO  : Finished PSI-BLAST
30/07/2013 21:54:50 : INFO  : Running Buildali to generate a3m file
30/07/2013 22:05:50 : INFO  : Converting to HMM
30/07/2013 22:05:53 : INFO  : Calibrating HMM
30/07/2013 22:06:03 : INFO  : Searching HMM database
30/07/2013 22:15:49 : INFO  : Finished buildali
30/07/2013 22:15:49 : INFO  : Predicting secondary structure
30/07/2013 22:15:49 : INFO  : Predicted secondary structure (PSI-Pred)
30/07/2013 22:15:49 : INFO  : Predicting Disordered regions
30/07/2013 22:15:49 : INFO  : Predicted Disorder (Disopred)
30/07/2013 22:15:49 : INFO  : Running memsat_svm check
30/07/2013 22:16:22 : INFO  : Globular protein
30/07/2013 22:16:22 : INFO  : Predicted Transmembrane (memsat_svm) ID 'f11c4db5197c08fc'
30/07/2013 22:16:22 : INFO  : Initialising fold library search
30/07/2013 22:16:22 : INFO  : Initialised search input
30/07/2013 22:16:22 : INFO  : Building Ensemble models
30/07/2013 22:16:22 : INFO  : Building hh.c3nhnA_.model.1.pdb
30/07/2013 22:16:23 : INFO  : Building hh.c1k9aB_.model.2.pdb
30/07/2013 22:16:24 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/hh.c1k9aB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/c1k9aB_.1.pdb
30/07/2013 22:16:24 : INFO  : Building hh.c2fo0A_.model.3.pdb
30/07/2013 22:16:24 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/hh.c2fo0A_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/c2fo0A_.2.pdb
30/07/2013 22:16:24 : INFO  : Building hh.c1oplA_.model.4.pdb
30/07/2013 22:16:25 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/hh.c1oplA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/c1oplA_.3.pdb
30/07/2013 22:16:25 : INFO  : Building hh.c1y57A_.model.5.pdb
30/07/2013 22:16:26 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/hh.c1y57A_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/c1y57A_.4.pdb
30/07/2013 22:16:26 : INFO  : Building hh.c2ablA_.model.6.pdb
30/07/2013 22:16:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/hh.c2ablA_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/c2ablA_.5.pdb
30/07/2013 22:16:27 : INFO  : Building hh.c1griA_.model.7.pdb
30/07/2013 22:16:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/hh.c1griA_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/c1griA_.10.pdb
30/07/2013 22:16:27 : INFO  : Building hh.c2lqnA_.model.8.pdb
30/07/2013 22:16:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/hh.c2lqnA_.model.8.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/c2lqnA_.12.pdb
30/07/2013 22:16:28 : INFO  : Building hh.c2l3sA_.model.9.pdb
30/07/2013 22:16:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/hh.c2l3sA_.model.9.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/c2l3sA_.13.pdb
30/07/2013 22:16:28 : INFO  : Building hh.c2eyzA_.model.10.pdb
30/07/2013 22:16:29 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/hh.c2eyzA_.model.10.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/f11c4db5197c08fc/c2eyzA_.15.pdb
30/07/2013 22:16:29 : INFO  : Building c1k9aB_.1.pdb
30/07/2013 22:16:30 : INFO  : Building c2fo0A_.2.pdb
30/07/2013 22:16:30 : INFO  : Building c1oplA_.3.pdb
30/07/2013 22:16:33 : INFO  : Building c1y57A_.4.pdb
30/07/2013 22:16:33 : INFO  : Building c2ablA_.5.pdb
30/07/2013 22:16:34 : INFO  : Building c3nhnA_.6.pdb
30/07/2013 22:16:34 : INFO  : Building c2h8hA_.7.pdb
30/07/2013 22:16:35 : INFO  : Building c2c0iA_.8.pdb
30/07/2013 22:16:35 : INFO  : Building c1x27F_.9.pdb
30/07/2013 22:16:36 : INFO  : Building c1griA_.10.pdb
30/07/2013 22:16:37 : INFO  : Building c1g83A_.11.pdb
30/07/2013 22:16:37 : INFO  : Building c2lqnA_.12.pdb
30/07/2013 22:16:37 : INFO  : Building c2l3sA_.13.pdb
30/07/2013 22:16:38 : INFO  : Building c2b3oA_.14.pdb
30/07/2013 22:16:38 : INFO  : Building c2eyzA_.15.pdb
30/07/2013 22:16:39 : INFO  : Building c2ci8A_.16.pdb
30/07/2013 22:16:39 : INFO  : Building c3ps5A_.17.pdb
30/07/2013 22:16:40 : INFO  : Building c2shpA_.18.pdb
30/07/2013 22:16:40 : INFO  : Building c2eo6A_.19.pdb
30/07/2013 22:16:41 : INFO  : Building c1ng2A_.20.pdb
30/07/2013 22:16:54 : INFO  : Finished HH model building
30/07/2013 22:16:54 : WARN  : Set python to /bmm/www/servers/phyre2/bin//python2.7/2.7.2/bin/python2.7
30/07/2013 22:17:04 : INFO  : html domain output complete ID 'f11c4db5197c08fc'
30/07/2013 22:46:50 : INFO  : Run end  : Tue Jul 30 22:46:50 BST 2013
