Phyre 2 alignment of Q99M51 with d1vyva1

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Job Description | Q99M51
Confidence | 99.31% | Date | Tue Jul 30 13:14:31 BST 2013
Rank | 301 | Aligned Residues | 51
% Identity | 16% | Template | d1vyva1
SCOP info | SH3-like barrel | SH3-domain | SH3-domain
Resolution | 3

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | V | V | V | V | A | K | F | D | Y | V | A | Q | Q | E | Q | E | . | . | . | . | . | . | . | L | D | I | K | K | N | E | R | L | W | L | L | D | D | S | K | S | W | W | R | V | R | N | S | . | . | . | M | N | K | T | G | F | V | P | S | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | A | V | K | T | N | V | S | Y | C | G | A | L | D | E | D | V | P | V | P | S | S | A | V | S | F | D | A | K | D | F | L | H | I | K | E | K | Y | N | N | D | W | W | I | G | R | L | V | K | E | G | C | E | I | G | F | I | P | S | P
Template Known Secondary structure |  |  |  |  |  |  | S | S |  | B |  | T | T | S |  |  | S |  | S | S | T | T |  | B |  |  | B |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S | S | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | .
|  | 55
Predicted Secondary structure |  |
Query SS confidence |  |
Query Sequence |  | Y
Query Conservation |  |
Alig confidence |  |
Template Conservation |  |
Template Sequence |  | L
Template Known Secondary structure |  |
Template Predicted Secondary structure |  |
Template SS confidence |  |
|  | 154

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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