Return to main results Retrieve Phyre Job Id

Job DescriptionQ99M51
Confidence99.67%DateTue Jul 30 13:14:31 BST 2013
Rank180Aligned Residues60
% Identity25%Templatec2ct4A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cdc42-interacting protein 4; PDBTitle: solution strutcure of the sh3 domain of the cdc42-2 interacting protein 4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30....... ..40.........50.........60.
Predicted Secondary structure 





















..










Query SS confidence 

































. .























Query Sequence  EVVVVAKFDYVAQQEQELDIKKNERLWLLDDSKS. . WWRVRNSMNKTGFVPSNYVERKNS
Query Conservation     






 
    



  

 
 

   
 ..

      
  
 

 



    
Alig confidence 

































..























Template Conservation       


 
 
    


   

 
 
        
       
  
 

  

     
Template Sequence  GGHCVAIYHFEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTSG
Template Known Secondary structure  S
SS
B


STT


B
TT


SSS

SSS
GGG


Template Predicted Secondary structure 



























Template SS confidence 



























































   7..10.........20.........30.........40.........50.........60......
 
   62.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  AR
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  PS
Template Known Secondary structure 
S
Template Predicted Secondary structure 

Template SS confidence 

   67.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D