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Job DescriptionQ99M51
Confidence97.62%DateTue Jul 30 13:14:31 BST 2013
Rank320Aligned Residues191
% Identity15%Templatec3npfB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative dipeptidyl-peptidase vi; PDBTitle: crystal structure of a putative dipeptidyl-peptidase vi (bacova_00612)2 from bacteroides ovatus at 1.72 a resolution
Resolution1.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140........ .150.........160.........170.........180....
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Query Sequence  SLIKGTKVIVMEKCSDGWWRGSY. NGQIGWFPSNYVTEEGDSPLGDHVGSLSEKLAAVVN
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Template Sequence  QALLGXPVKVLQY. . NGWYEIQTPDDYTGWVHRXVITPXSKERYDEWNRAEKIVVTSHYG
Template Known Secondary structure  TT
..SS
TTS
GGG
S

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   56...60........ .70.........80.........90.........100.........110...
 
   185....190.........200.........210.........220.........230.........240....
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Query Sequence  NLNTGQVLHVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPEWWKCRKINGMVGLVPK
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Template Sequence  FAYEKPD. . . . . . . . . . . ESSQPVSDVVAGNRLKWEGS. . . KGHFYQVSYPDGRKAYLSK
Template Known Secondary structure  SSSS...........TTS
TT
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TTS
T
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   114.....120 .........130.........140 .........150.........
 
   245....250.........260.........270.........280.....
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Query Sequence  NYVTIMQNNPLTSGLEPSPPQCDYIRPSLTGKFAGNPWYYG. . . . . . . . . . . . . . . . . . .
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Template Sequence  SIS. . . . . . QPEAGWRASLKQDVESIIETAYSXXGIPYLWAGTSSKGVDSGLVRTVLFXH
Template Known Secondary structure  TS......T


STTTT
BB
TT
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TT
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   160.. .......170.........180.........190.........200.........210...
 
   286...290.........300.........310.........320.. .......330........
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Query Sequence  . . KVTRHQAEMALNERGHEGDFLIRDSESSPNDFSVSLK. . . . . AQGKNKHFKVQLKETV
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Template Sequence  DIIIPRDASQQA. . YVGEHIDIAPDFSNVKRGDLVFFGRKATAERKEGISHVGIYLGNKQ
Template Known Secondary structure  T

SST..TSS


TT
TT

TT



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TT
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   215....220...... ...230.........240.........250.........260.........270..
 
   339340
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Query Sequence  YC
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Template Sequence  FI
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   273.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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