Return to main results Retrieve Phyre Job Id

Job DescriptionQ99M51
Confidence78.20%DateTue Jul 30 13:14:31 BST 2013
Rank335Aligned Residues123
% Identity15%Templatec1m9sA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:internalin b; PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains.
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130........ .140.........150.. .......160.........170....
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Query Sequence  AEREDELSLIKGTKVIVMEK. . . CSDGWWRGSYNGQI. GWFPSNYVTEEGDSPLGDHVGS
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Template Sequence  AKHVNKLSVYQGKNMRILREAKTPITTWYQFSIGGKVIGWVDTRALNT. . . . . . . FYKQS
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GGGG
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   500.........510.........520.........530.........540....... ..550..
 
   175....180.........190.........200.........210.........220........ .230...
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Query Sequence  LSEKLAAVVNNLNTGQVLHVVQALYPFSSSNDEELNFEKGDVMDVIEKPENDPE. WWKCR
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Template Sequence  MEKPTRLTRYVSANKAGESYYKVPVADNPVKRGTLAKYKNQKLIVDCQATIEGQLWYRIR
Template Known Secondary structure  G

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GGGGGGSTT

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   553......560.........570.........580.........590.........600.........610..
 
   234.....240........
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Query Sequence  KINGMVGLVPKNYVT
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Template Sequence  TSSTFIGWTKAANLR
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SSSGGG
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   613......620.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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