Return to main results Retrieve Phyre Job Id

Job DescriptionQ99M51
Confidence99.66%DateTue Jul 30 13:14:31 BST 2013
Rank191Aligned Residues60
% Identity30%Templatec2vknA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:protein ssu81; PDBTitle: yeast sho1 sh3 domain complexed with a peptide from pbs2
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10......... 20.........30.........40.........50.........60..
Predicted Secondary structure 









..






















Query SS confidence 














. .










































Query Sequence  VVVVAKFDYVAQQEQ. . ELDIKKNERLWLLDDSKSWWRVRNSMNKTGFVPSNYVERKNSA
Query Conservation    






 
    ..



  

 
 

   
 

      
  
 

 



     
Alig confidence 














..










































Template Conservation      

  
     
  



  

 
 
      

      
  
 

  


 
   
Template Sequence  YKAKALYPYDADDDDAYEISFEQNEILQVSDIEGRWWKARRANGETGIIPSNYVQLIDGP
Template Known Secondary structure  SS
B


SSSTTB

B
TT

TTSS
TTS
GGG
Template Predicted Secondary structure 






























Template SS confidence 



























































   5....10.........20.........30.........40.........50.........60....
 
   63.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  RK
Query Conservation    
Alig confidence 

Template Conservation    
Template Sequence  EE
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 

   65.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D