 |
| Job Description | A0JP43 | | Confidence | 42.17% | Date | Tue Jul 30 13:08:59 BST 2013 |
| Rank | 84 | Aligned Residues | 73 |
| % Identity | 12% | Template | d1mkma2 |
| SCOP info | Profilin-like
| GAF domain-like
| IclR ligand-binding domain-like
|
| Resolution | 2.20 |
|
 |
|   |   |
1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | |
|
1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
F | R | D | F | L | F | K | C | T | D | T | S | E | V | I | L | A | S | S | G | . |
. |
G | E | T | H | I | A | I | P | L | R | Q | R | T | K | E | A | M | G | I | L | D | V | N | I | G | R | S | R | M | L | L | Y | Q | E | Y | K | D | L |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |
|
|   |
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
L | K | R | E | L | E | K | I | R | K | R | G | Y | A | V | D | N | E | E | N | E | I | G | I | M | C | V | G | V | P | I | F | D | H | N | G | Y | P | V | A | G | V | S | I | . |
S | G | V | A | R | K | F | T | E | E | K | I | E | E | Y |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  | S | S | S | S | T | T |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  | . |  |  |  | G | G | G |
|
|  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
1188 | . | 1190 | . | . | . | . | . | . | . | . | . | 1200 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | K | M | V | K | M | I | Q | N | V | S | Y | E | I | L | G |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
| Template Sequence |   |
S | D | V | L | K | E | K | A | E | E | I | S | R | K | L | G |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|