Job Description A0JP43 Confidence 96.24% Date Tue Jul 30 13:08:59 BST 2013 Rank 25 Aligned Residues 76 % Identity 25% Template c4g3kB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator nlh1; PDBTitle: crystal structure of a. aeolicus nlh1 gaf domain in an inactive state Resolution 3.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		968	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	F	T	V	V	D	E	G	K	P	I	H	V	P	Q	V	Q	H	H	G	N	I	F	F	W	N	S	F	R	S	K	N	E	Y	N	G	S	F	L	A	L	P	L	Q	D	A	Y	M	R	I	F	G	V	L	A	V	D	T
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.													.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.													.
Template Sequence		G	I	T	G	K	V	W	K	H	G	V	P	I	V	I	P	D	I	S	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	F	I	A	V	P	I	K	.	S	G	G	K	V	I	G	V	L	S	A	D	.
Template Known Secondary structure																	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.		T	T										.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.													.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.
		1028	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	D	P	H	E	I	N	I	F	L	P	H	E	I	K	F	Y	Q	G	V	A	N	A	F	S	T	A	Y	H	H	V	H	S	R	E	H	V
Query Conservation
Alig confidence		.	.	.								.
Template Conservation		.	.	.								.
Template Sequence		.	.	.	K	E	I	N	D	S	L	.	D	E	Y	T	R	F	L	S	M	I	A	T	L	I	A	N	S	F	S	L	E	R	K	V	Q	A	E
Template Known Secondary structure		.	.	.								.
Template Predicted Secondary structure		.	.	.								.
Template SS confidence
					133	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D