Job Description A0JP43 Confidence 96.64% Date Tue Jul 30 13:08:59 BST 2013 Rank 18 Aligned Residues 128 % Identity 11% Template c4fofA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of the blue-light absorbing form of the2 thermosynechococcus elongatus pixj gaf-domain Resolution 2.42 Å Model Dimensions (Å) X:38.197 Y:56.483 Z:35.506

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		935	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	P	E	R	G	H	V	L	L	R	N	V	A	C	T	L	D	D	A	P	F	V	L	N	K	V	L	Y	R	D	M	K	G	I	S	F	T	V	V	D	E	G	K	P	I	H	V	P	Q	V	Q	H	H	G	N	I	F	F	W
Query Conservation
Alig confidence																																																											.
Template Conservation																																																											.
Template Sequence		A	F	D	D	N	Y	V	G	T	V	V	A	E	S	V	A	E	G	W	P	Q	A	R	D	Q	V	I	E	D	P	C	F	R	E	H	W	V	E	A	Y	R	Q	G	R	I	Q	A	T	T	D	I	F	K	A	G	L	T	.	E	C
Template Known Secondary structure					T	T												T	T	S				T	T						T					T	T						T	T						S		G	G	G	S				.
Template Predicted Secondary structure																																																											.
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520		.	.
		995	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	F	R	S	K	N	E	Y	N	G	S	F	L	A	L	P	L	Q	D	A	Y	M	R	I	F	G	V	L	A	V	D	T	L	R	D	P	H	E	I	N	I	F	L	P	H	E	I	K	F	Y	Q	G	V	A	N	A	F	S	T
Query Conservation
Alig confidence																					.																			.	.	.
Template Conservation																					.																			.	.	.
Template Sequence		H	L	N	Q	L	R	P	L	K	V	R	A	N	L	V	V	P	M	V	.	I	D	D	Q	L	F	G	L	L	I	A	H	Q	A	S	E	P	R	.	.	.	Q	W	Q	E	I	E	I	D	Q	F	S	E	L	A	S	T	G	S	L
Template Known Secondary structure							G	G	G	T		S									.		T	T												S	S			.	.	.
Template Predicted Secondary structure																					.																			.	.	.
Template SS confidence
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.		.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.				560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
		1055	.	.	.	.	1060	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	H	H	V	H	S	R	E	H	V	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	E	R	L	H	F	L	E	Q	T	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		579	580	.	.	.	.	.	.	.	.	.	590	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D