Job Description A0JP43 Confidence 35.19% Date Tue Jul 30 13:08:59 BST 2013 Rank 90 Aligned Residues 59 % Identity 31% Template c4f11A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:gamma-aminobutyric acid type b receptor subunit 2; PDBTitle: crystal structure of the extracellular domain of human gaba(b)2 receptor gbr2 Resolution 2.38 Å

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		946	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.																															.	.	.	.	970	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	A	C	T	L	D	D	A	P	F	V	L	N	K	V	L	Y	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	G	I	S	F	T	V	V	D
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	H	G	Y	A	Y	D	G	I	W	V	I	A	K	T	L	Q	R	A	M	E	T	L	H	A	S	S	R	H	Q	R	I	Q	D	F	N	Y	T	D	H	T	L	G	R	I	I	L	N	A	M	N	E	T	N	F	F	G	V	T
Template Known Secondary structure		T	T																									S	S	S				G	G	G		S	S															T						T	T
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		976	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	K	P	I	H	V	P	Q	V	Q	H	H	G	N	I	F	F	W	N	S	F	R	S	K	N	E	Y	N	G	S	F	L	A	L	P	L	Q	D	A	Y	M	R	I	F	G	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	V	V	F	R	N	.	.	.	.	.	G	E	R	M	G	T	I	K	F	T	Q	F	Q	D	S	R	E	V	K	V	G	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.							T	.	.	.	.	.	T													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.
Template SS confidence
															413	.	.	.	.	.	.						420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D