Job Description A0JP43 Confidence 24.00% Date Tue Jul 30 13:08:59 BST 2013 Rank 126 Aligned Residues 146 % Identity 15% Template c3zeuE_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:probable trna threonylcarbamoyladenosine biosynthesis PDBTitle: structure of a salmonella typhimurium ygjd-yeaz heterodimer2 bound to atpgammas Resolution 1.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1022	.	.	.	.	.	.	.	1030								.	.	.	.	.	.	.	.	.	1040	.	.	.	.							.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		V	L	A	V	D	T	L	R	D	.	.	.	.	.	.	.	P	H	E	I	N	I	F	L	P	H	E	I	K	F	.	.	.	.	.	.	Y	Q	G	V	A	N	A	F	S	T	A	Y	H	H	V	H	S	R	E	H	V	L	H	S
Query Conservation											.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.															.	.	.	.	.	.															.	.	.	.
Template Conservation																																																				.	.	.	.
Template Sequence		V	L	G	I	E	T	S	C	D	E	T	G	I	A	I	Y	D	D	K	K	G	L	L	A	N	Q	L	Y	S	Q	V	K	L	H	A	D	Y	G	G	V	V	P	E	L	A	S	R	D	H	V	.	.	.	.	R	K	T	V	P	L
Template Known Secondary structure								S	S	S									T	T	T															G	G	G	T	S												.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.					.	.	.	.	.	.
		1069	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.			.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		V	M	T	G	I	R	W	L	F	S	V	T	S	G	I	T	T	I	T	T	C	F	I	E	P	S	S	E	Q	E	D	Y	V	L	R	N	M	M	V	T	D	C	L	G	L	A	E	I	H	T	D	P	P	T	I	.	.	T	R	N
Query Conservation																																																									.	.
Alig confidence																				.								.	.	.	.																										.	.
Template Conservation																				.								.	.	.	.
Template Sequence		I	Q	A	A	L	K	E	A	G	L	T	A	S	D	I	D	A	V	.	A	Y	T	A	G	P	G	.	.	.	.	L	V	G	A	L	L	V	G	A	T	V	G	R	S	L	A	F	A	W	N	V	P	A	I	P	V	H	H	M	E
Template Known Secondary structure										T			G	G	G					.						S	S	.	.	.	.																				T
Template Predicted Secondary structure																				.								.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		1127	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.			.	.	1170	.	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		A	C	I	F	R	D	F	L	F	K	C	T	D	T	S	E	V	I	L	A	S	S	G	G	E	T	H	I	A	I	P	L	R	Q	R	T	K	E	A	M	G	.	.	I	L	D	V	N	I	G	R	S
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		G	H	L	L	A	P	M	L	E	D	N	P	P	E	F	P	F	V	A	L	L	V	S	G	G	H	T	Q	L	I	S	V	T	G	I	G	Q	Y	E	L	L	G	E	S	I	D	D	A	A	G	E	A
Template Known Secondary structure						G	G	G	G	S	S	S				S	S								S	S										T	T								B	S	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D