Job Description A0JP43 Confidence 22.18% Date Tue Jul 30 13:08:59 BST 2013 Rank 139 Aligned Residues 109 % Identity 27% Template c3vu1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein ph0242; PDBTitle: crystal structure of the c-terminal globular domain of2 oligosaccharyltransferase (phaglb-l, o74088_pyrho) from pyrococcus3 horikoshii Resolution 2.70 Å

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		1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.						1090	.	.	.	.	.	.	.	.						.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.										.	.	.	.	.
Query SS confidence																						.	.	.	.	.										.	.	.	.	.
Query Sequence		M	T	G	I	R	W	L	F	S	V	T	S	G	I	T	T	I	T	T	C	.	.	.	.	.	F	I	E	P	S	S	E	Q	E	.	.	.	.	.	D	Y	V	L	R	N	M	M	V	T	D	C	L	G	L	A	E	I	H	T	D
Query Conservation																						.	.	.	.	.										.	.	.	.	.
Alig confidence																						.	.	.	.	.										.	.	.	.	.
Template Conservation
Template Sequence		E	Q	A	L	K	W	L	R	S	N	T	S	K	Y	A	T	A	T	S	W	W	D	Y	G	Y	W	I	E	S	S	L	L	G	N	R	R	R	D	R	D	H	I	L	A	L	F	L	A	R	D	G	N	I	S	E	V	D	F	E	S
Template Known Secondary structure												S		T	T						S	S		T	T	T	T				S			S																		S	G	G	G				G	G	G
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
		1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.										.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		P	P	T	I	T	R	N	A	C	I	F	R	D	F	L	F	K	C	T	D	T	S	E	V	I	L	A	S	S	G	G	E	.	.	.	.	.	.	.	.	.	T	H	I	A	I	P	L	R	Q	R	T	K	E	A	M	G	I	.	.
Query Conservation																																		.	.	.	.	.	.	.	.	.																		.	.
Alig confidence									.	.																								.	.	.	.	.	.	.	.	.																		.	.
Template Conservation									.	.
Template Sequence		W	E	L	N	Y	F	I	.	.	I	Y	L	N	D	W	A	K	F	N	A	I	S	Y	L	G	G	A	I	T	R	K	E	Y	N	G	D	E	N	G	R	G	R	V	T	T	I	L	L	T	Q	A	A	G	N	V	Y	V	N	P	Y
Template Known Secondary structure		G	T						.	.			G	G	G	G	G	G								T	T	S	S									T	T	S														S	S					T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		562	.	.	.	.	.	.			.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
																	1169	1170	.	.	.	.	.	.	.	.	.	1180
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	V	N	I	G	R	S	R	M	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	I	V	I	K	V	I	Q	Q	N	K	T	R	R	I	A	V	N	I	G	Q	L	E	C	S	P
Template Known Secondary structure		T	T									S	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D