Job Description A0JP43 Confidence 49.57% Date Tue Jul 30 13:08:59 BST 2013 Rank 79 Aligned Residues 74 % Identity 15% Template c3r4kD_ PDB info PDB header:dna binding protein Chain: D: PDB Molecule:transcriptional regulator, iclr family; PDBTitle: crystal structure of a putative iclr transcriptional regulator2 (tm1040_3717) from silicibacter sp. tm1040 at 2.46 a resolution Resolution 2.46 Å

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		1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.			1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		F	R	D	F	L	F	K	C	T	D	T	S	E	V	I	L	A	S	S	G	.	.	G	E	T	H	I	A	I	P	L	R	Q	R	T	K	E	A	M	G	I	L	D	V	N	I	G	R	S	R	M	L	L	Y	Q	E	Y	K	D	L
Query Conservation																						.	.
Alig confidence																						.	.																																		.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		I	R	A	E	I	A	E	V	R	R	T	G	L	A	Q	S	I	G	G	F	E	A	E	V	H	S	H	A	V	P	I	F	G	P	D	R	A	V	L	G	A	L	A	V	A	A	P	T	S	R	X	T	P	D	Q	.	.	.	.	K
Template Known Secondary structure													S						S	S	S	S	T	T											T	T	S												G	G	G						.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.
		1188	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	M	V	K	M	I	Q	N	V	S	Y	E	I	L	G	E	F	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	I	P	P	A	L	R	A	A	G	L	S	L	T	E	R	I	G	G
Template Known Secondary structure																			T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D