Job Description A0JP43 Confidence 96.26% Date Tue Jul 30 13:08:59 BST 2013 Rank 24 Aligned Residues 168 % Identity 14% Template c3p01A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of two-component response regulator from nostoc sp.2 pcc 7120 Resolution 2.65 Å

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		867	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	L	E	R	S	H	V	E	G	L	R	N	C	A	R	R	K	W	L	H	Q	I	Q	Y	A	A	E	T	S	G	V	S	L	E	P	V	Y	T	E	T	F	R	V	L	T	Q	D	A	E	A	H	G	N	K	K	I	S	A	H
Query Conservation
Alig confidence																																	.																						.	.	.	.	.
Template Conservation																																	.																						.	.	.	.	.
Template Sequence		D	L	L	K	Q	R	T	E	E	L	R	R	A	N	A	Q	X	S	L	L	T	V	L	V	Q	V	T	Q	A	S	N	.	S	L	E	A	I	L	T	P	I	A	T	A	F	A	E	S	F	A	V	N	A	.	.	.	.	.	C	I
Template Known Secondary structure																																S	.	S	S																T		S		.	.	.	.	.
Template Predicted Secondary structure																																	.																						.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.						.	.
		927	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	L	L	E	E	N	V	F	L	P	E	R	G	H	V	L	L	R	N	V	A	C	T	L	D	D	A	P	F	V	L	N	K	V	L	Y	R	D	M	K	G	I	S	F	T	V	V	D	E	G	K	P	I	H	V	P	Q	V	Q
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																				.	.	.
Template Sequence		L	Q	X	L	E	G	Q	T	.	.	.	.	.	.	.	.	.	L	S	T	I	Q	G	F	Y	S	Q	Q	G	T	V	N	N	W	L	N	.	.	.	Q	D	P	L	T	N	E	A	I	A	T	G	Q	I	Q	V	A	A	N	I	A
Template Known Secondary structure							T	T		.	.	.	.	.	.	.	.	.										S	S	S	S					G	G	.	.	.	G												S					S		G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		987	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	G	N	I	F	F	W	N	S	F	R	S	K	N	E	Y	N	G	S	F	L	A	L	P	L	Q	D	A	Y	M	R	I	F	G	V	L	A	V	D	T	L	R	D	P	H	E	I	N	I	F	L	P	H	E	I	K	F	Y	Q
Query Conservation
Alig confidence										.	.																		.																			.	.	.	.
Template Conservation										.	.																		.																			.	.	.	.
Template Sequence		K	D	P	K	L	A	S	I	.	.	S	Q	Y	Q	D	N	G	I	Q	S	H	V	V	I	P	I	T	.	Y	R	N	E	X	L	G	V	L	S	L	Q	W	Q	Q	P	I	S	.	.	.	.	L	R	E	D	E	L	T	L	I	H
Template Known Secondary structure		G						T		.	.							T											.		T	T											S	S				.	.	.	.
Template Predicted Secondary structure										.	.																		.																			.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.
		1047	.	.	1050	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	N	A	F	S	T	A	Y	H	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	A	Q	L	V	A	I	A	L	T	S	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D