Job Description A0JP43 Confidence 96.68% Date Tue Jul 30 13:08:59 BST 2013 Rank 16 Aligned Residues 125 % Identity 14% Template c3oovA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein, putative; PDBTitle: crystal structure of a methyl-accepting chemotaxis protein, residues2 122 to 287 Resolution 2.20 Å Model Dimensions (Å) X:48.468 Y:39.132 Z:33.933

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		935	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	P	E	R	G	H	V	L	L	R	N	V	A	C	T	L	D	D	A	P	F	V	L	N	K	V	L	Y	R	D	M	K	G	I	S	F	T	V	V	D	E	G	K	P	I	H	V	P	Q	V	Q	H	H	G	N	I	F	F	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	A	D	T	A	R	T	S	L	S	F	V	A	A	V	G	T	A	D	F	N	P	A	G	V	V	L	P	L	D	Q	R	G	G	V	I	T	K	C	F	T	D	R	Q	V	Y	X	I	D	D	V	S	A	Y	P	T	D	F	R	L
Template Known Secondary structure					T	T	S	S									S		S	S				T	T					S	S	G	G	G										T						S		G	G	G	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		995	.	.	.	.	1000	.	.	.	.	.			.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		N	S	F	R	S	K	N	E	Y	N	G	.	.	S	F	L	A	L	P	L	Q	D	A	Y	M	R	I	F	G	V	L	A	V	D	T	L	R	D	P	H	E	I	N	I	F	L	P	H	E	I	K	F	Y	Q	G	V	A	N	A	F
Query Conservation													.	.
Alig confidence													.	.									.																			.	.	.
Template Conservation																							.																			.	.	.
Template Sequence		Q	S	P	Y	D	A	I	R	A	L	R	S	K	S	F	V	I	C	P	I	V	.	V	K	G	E	A	I	G	V	F	A	V	D	N	R	S	S	R	R	.	.	.	S	L	N	D	T	D	V	D	T	I	K	L	F	A	D	Q	A
Template Known Secondary structure			T	T	G	G	G		G	G	G			S	S								.		T	T											T	T	S	S	S	.	.	.
Template Predicted Secondary structure																							.																			.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		1053	.	.	.	.	.	.	1060	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	A	Y	H	H	V	H	S	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	A	I	V	R	I	N	L	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D