Job Description A0JP43 Confidence 94.32% Date Tue Jul 30 13:08:59 BST 2013 Rank 43 Aligned Residues 109 % Identity 13% Template c3o5yA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:sensor protein; PDBTitle: the crystal structure of the gaf domain of a two-component sensor2 histidine kinase from bacillus halodurans to 2.45a Resolution 2.45 Å

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		944	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	N	V	A	C	T	L	D	D	A	P	F	V	L	N	K	V	L	Y	R	D	M	K	G	I	S	F	T	V	V	D	E	G	K	P	I	H	V	P	Q	V	Q	H	H	G	N	I	F	F	W	N	S	F	R	S	K	N	E	Y
Query Conservation
Alig confidence																																																	.	.
Template Conservation																																																	.	.
Template Sequence		L	K	L	S	H	V	Y	P	K	G	S	H	S	L	D	I	G	S	T	I	P	K	E	Q	S	L	Y	W	S	A	L	D	Q	R	Q	T	I	F	R	S	L	T	D	T	Q	D	N	.	.	F	Y	E	K	Q	Y	L	A	I	L	D
Template Known Secondary structure									S	T	T			S	S		T	T					S	T	T										T	S						S			T	T			.	.		T	T						T	T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.
		1004	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	S	F	L	A	L	P	L	Q	D	A	Y	M	R	I	F	G	V	L	A	V	D	T	L	R	D	P	H	E	I	N	I	F	L	P	H	E	I	K	F	Y	Q	G	V	A	N	A	F	S	T	A	Y	H	H	V
Query Conservation
Alig confidence														.												.					.	.	.
Template Conservation														.												.					.	.	.
Template Sequence		L	K	S	I	L	V	I	P	I	Y	S	K	.	N	K	R	V	G	V	L	S	I	G	R	.	K	Q	Q	I	.	.	.	D	W	S	L	D	D	L	A	F	L	E	Q	L	T	D	H	L	A	V	S	I	E	N	V
Template Known Secondary structure													S	.	S											.	S	S			.	.	.																							T	T
Template Predicted Secondary structure														.												.					.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120		.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D