Return to main results Retrieve Phyre Job Id

Job DescriptionA0JP43
Confidence97.28%DateTue Jul 30 13:08:59 BST 2013
Rank8Aligned Residues178
% Identity15%Templatec3o4xE_
PDB info PDB header:protein bindingChain: E: PDB Molecule:protein diaphanous homolog 1; PDBTitle: crystal structure of complex between amino and carboxy terminal2 fragments of mdia1
Resolution3.20 Å
Model Dimensions (Å)X:42.169 Y:124.834 Z:46.935

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30......... 40.........50.........60.......
Predicted Secondary structure 


















.




Query SS confidence 






























.



























Query Sequence  KLLSQADIPTKFDPINYLGEYLMRHNTHYIK. DPGVSGYQRVMKEITEELKTHVPDTINN
Query Conservation              
    

  
    
    .        
  

  



  
 
 
 
Alig confidence 






























.





















.




Template Conservation 

 
 

 
   


  
   
    
 
     

  
  
  
    
   
.  
  
Template Sequence  KLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSL. DQMKK
Template Known Secondary structure  GGGG
B
TTSS
B
GGGGG
STS
.
Template Predicted Secondary structure 

















.
Template SS confidence 



























































   989990.........1000.........1010.........1020.........1030.........1040.. .....
 
   68.70.........80.........90.........100.........110.........120.......
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  RISKMKEKVKEKREQREYISTVKVKVAGMRKQALEEQFNEWVLNPKGMIPIVVYISSYIT
Query Conservation 

 




 
  


 
  
    
 

 
   



  
   
        
  
    
Alig confidence 



























































Template Conservation                     
 
      

  
   
  
             
  



Template Sequence  QIADVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVF
Template Known Secondary structure  T




STT

TT
Template Predicted Secondary structure 






Template SS confidence 



























































   1048.1050.........1060.........1070.........1080.........1090.........1100.......
 
   128.130.........140.........150.........160.........170.........180.......
Predicted Secondary structure 
Query SS confidence 



























































Query Sequence  DLKSEVFEEFLKHLCHSAEEFREIILTDMRRQMFAELFLQCDSGKVMALDRQRTLALLEA
Query Conservation      
  

  
         

    
  

         
     
    
     
 
Alig confidence 



























































Template Conservation          


     
      
 

   
   
 
                       
Template Sequence  DPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERLEKQQKRE
Template Known Secondary structure 
TTTS
Template Predicted Secondary structure 





Template SS confidence 



























































   1108.1110.........1120.........1130.........1140.........1150.........1160.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D