Job Description A0JP43 Confidence 46.61% Date Tue Jul 30 13:08:59 BST 2013 Rank 81 Aligned Residues 52 % Identity 17% Template c3nybA_ PDB info PDB header:transferase/rna binding protein Chain: A: PDB Molecule:poly(a) rna polymerase protein 2; PDBTitle: structure and function of the polymerase core of tramp, a rna2 surveillance complex Resolution 2.70 Å

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		1028	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	D	P	H	E	I	N	I	F	L	P	H	E	I	K	F	Y	Q	G	V	A	N	A	F	S	T	A	Y	H	H	V	H	S	R	E	H	V	L	H	S	V	M	T	G	I	R	W	L	F	S	V	T	S	G	I
Query Conservation
Alig confidence																																										.	.	.	.
Template Conservation																																										.	.	.	.
Template Sequence		I	Q	D	P	G	D	E	S	N	N	I	S	R	G	S	F	N	I	R	D	I	K	K	A	F	A	G	A	F	D	L	L	T	N	R	C	F	E	L	H	.	.	.	.	S	A	T	F	K	D	R	L	G	K	S	I
Template Known Secondary structure		B			T	T						T	T	T	T		T	T																								.	.	.	.	T	S						T	T			S
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.					.	.	.	.	.	.	.	470	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D