 |
| Job Description | A0JP43 | | Confidence | 96.22% | Date | Tue Jul 30 13:08:59 BST 2013 |
| Rank | 26 | Aligned Residues | 82 |
| % Identity | 18% | Template | c3mmhA_ |
| PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:methionine-r-sulfoxide reductase; |
PDBTitle: x-ray structure of free methionine-r-sulfoxide reductase from2 neisseria meningitidis in complex with its substrate
|
| Resolution | 1.25 Å |
|
 |
|   |   |
964 | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | D | M | K | G | I | S | F | T | V | V | D | E | G | K | P | I | H | V | P | Q | V | Q | H | H | G | N | I | F | F | W | N | S | F | R | S | K | N | E | Y | N | G | S | F | L | A | L | P | L | Q | D | A | Y | M | R | I | F | G | V | L |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|   | . |   |   |   |   |   |   |
|
|
|
| Template Sequence |   |
P | F | G | R | G | V | C | G | Q | A | W | A | K | G | G | T | V | V | V | G | D | V | D | A | H | P | D | . |
. |
. |
. |
. |
. |
H | I | A | C | S | S | L | S | R | S | E | I | V | V | P | L | F | . |
S | D | G | R | C | I | G | V | L |
| Template Known Secondary structure |   |
 | T | T | S |  |  |  |  |  |  |  |  |  | T | S |
|  |  |  | S |
| G | G | G | S | T | T | . | . | . | . | . | . |
|
|
| S | S | T | T |
|
|  |  |  |  |  |  |  |  | . |  | T | T |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |
|
|
|  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
. | . | . | . | . | . | . | 130 | . |
|   |
|   |   |
1024 | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | V | D | T | L | R | D | P | H | E | I | N | I | F | L | P | H | E | I | K | F | Y | Q | G | V | A | N | A | F | S | T | A | Y |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |   | . | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|
|
| Template Sequence |   |
D | A | D | S | . |
. |
. |
. |
E | H | L | A | Q | F | D | E | T | D | A | L | Y | L | G | E | L | A | K | I | L | E | K | R | F |
| Template Known Secondary structure |   |
 |  |  |  | . | . | . | . | S | S | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |
| . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
132 | . | . | . | |
|
|
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|